ID JN899075; SV 1; linear; genomic RNA; STD; VRL; 7696 BP. XX AC JN899075; XX DT 14-MAY-2012 (Rel. 112, Created) DT 14-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Bat sapovirus TLC58/HK, complete genome. XX KW . XX OS Bat sapovirus TLC58/HK OC Viruses; Riboviria; Caliciviridae; Sapovirus; unclassified Sapovirus. XX RN [1] RC Publication Status: Online-Only RP 1-7696 RX PUBMED; 22514697. RA Tse H., Chan W.M., Li K.S., Lau S.K., Woo P.C., Yuen K.Y.; RT "Discovery and genomic characterization of a novel bat sapovirus with RT unusual genomic features and phylogenetic position"; RL PLoS One 7(4):E34987-E34987(2012). XX RN [2] RP 1-7696 RA Tse H., Chan W.M., Lau S.K.P., Woo P.C.Y., Yuen K.Y.; RT ; RL Submitted (21-OCT-2011) to the INSDC. RL Microbiology, The University of Hong Kong, Pokfulam Road, Hong Kong, China XX DR MD5; a6633144845e61041a3d23f56aad22cb. DR EuropePMC; PMC3325917; 22514697. DR EuropePMC; PMC4881899; 27228126. DR EuropePMC; PMC5035092; 27661997. XX FH Key Location/Qualifiers FH FT source 1..7696 FT /organism="Bat sapovirus TLC58/HK" FT /host="bat" FT /strain="TLC58/HK" FT /mol_type="genomic RNA" FT /country="Hong Kong" FT /db_xref="taxon:1185359" FT CDS 10..6864 FT /codon_start=1 FT /product="polyprotein" FT /note="ORF1" FT /db_xref="GOA:I2APU7" FT /db_xref="InterPro:IPR000317" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR004005" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="UniProtKB/TrEMBL:I2APU7" FT /protein_id="AFJ39355.1" FT /translation="MAALSRVLAPAPPRGGWGKRFRRLPDHYFSCPPCKGWTESRPHLL FT DIEPAPCWVRVKPPRKRRYVPEGRLADLFQPRDSGDTLLRDAWESFLGVPLPSATNPRP FT LTLAGMRELYVYLTELAPGGDAGPYHAGFNRAQVEAAIATFEATLPPEMLAPRRQRVEV FT PPDMLELLYDAKGWDDIPGPGMRDIFRAMWTKLRKGVNDAFIPLAQCRDWITQNLNPGI FT SVKEAVLAFITGGQNALRGNAAVLAAKVLALLKPTTLAIILSQHRNTTAGWVLTLTALV FT ELYAGLGPICEWVVDLLKALLEFAGGVAGCIFDQFTTWYGRLTQSEGPAGYAAVGAGLI FT GLIYLWYAGRLPGTSATTRLLKACGAVTTGVGAVRAVKWIIDMFREQHQAGMVRMFMAR FT TAALLDCIEENPSPNSEEARGWLSSLEVIAGEGEEMLLLLGASPLAGMVRSMCERVQGA FT ASAMRAHLALNTTRKQPTMVVFGGPPGIGKTTLCHAIAAKMGLPTSTFSLLNDHHDTYT FT GNPVAIWDEFDTDKNGDFVEMVVSLVNTQPCPLDCDRIENKGRVFTSSIILATTNYATP FT VLPEHPRSEAFWRRIMYVDVKCADYEKWVRDNPGKPAPPTLFKSDFSHLQMTIRPFMGV FT DDQGTLLDGRTARGTSVTLSGIVRRLNKSYKAEGGPPKRHLWVQVPHDQLEQSAGALRG FT WRVWACAPCEVVVSPESCRVVNGSGLNTIFVASVPPTVEQMEFCLHVPTKGMANIQPNM FT SRAFDSSMWGSPLDLFVHNVSVSSSTMRDIVFGVSGATVHVWDDPKTMPVIPVTRTVVA FT AGLPAVVAGIWRHVCWRSAPGAVRAMRAAWSGGIDNFIDCFRALAGTRFTANPVSTLFR FT TPGGDISLYTYKEGMYVCATPGRVPVVGGGDFPNLGTSIPDNTSWWDLLSLFLDVLVTN FT YLPLILVGVTMYNVTTLMRRGQGHAEAKGKTKHGRGHALRDSEYEEYKDLMRDWRRDLT FT VAEFREIRDRALAGGNDAASQRYRAWLDVRELRMQNNAYRYDVVDVIGRQGHTVQAVRQ FT DLIRAPRKPLRDDYEDAYCMEGAGSPLVPVITGGVRVGWACHVGNGRFVTCAHLLDGTT FT TVADDVPRDVVIHQDTAQFRTNFNGPAYQLGEGLPEYFSGQRLPVRVIGEGVFETSTTT FT VDGWQYSVVAGVDTCPGDCGLPLFNARHQLVAIHAASSVDRSVKLANRVFGVKGTANTF FT AWKGLQVKESGRNVGGMPTGTRYGRSPAHPKQQEGETYEPAPLGAGDPRYTHSQVEMLV FT NGLRPYQETPPAAFDLNILRAAVNHCRGYIHSVIGNHRSPNLPFNLAAGSMDRATAAGP FT FVAGLKGDYWDEDAGRYVGALGDHIERTWDGAARGAPPCNAYKLALKDELRPIEKNQQG FT KRRLLWGADAGLTCCAAAVFTGVANRLKEVVPLTPVCVGINMDSAQVEVVHRALQDRTV FT YNVDYTKWDSTMQPAIIAEAIQIMCDLSEDTPMTTAVGNALKSPALGFFEDIVFTTRTG FT LPSGMPFTSQINSLCHMILIAYCILKVYHTAEVAYPGNIFNGETIFTYGDDGLYGFTRA FT TASVFEHIIEVMRSVGLQPTAPDKSPEIKPVTGDPVFLKRSIHRYADGRVRALIDPTSL FT TRQCYWVKGPRHRDPREVTYPDPVIRGVQLDNVLIAASQHPMDVWEPIYQLVIKTAAGE FT RAPLSILDRHQANAAYIMWYSGATSGGDAASDEAGDKIVFVMEGDRAPAPSTAPAVDGV FT VGPNDSALVPTGGPAPSAAAQVAQVAAATGAVSTNVPPDIGMTFVMLTQVTWTSRQPQG FT TLLGSLQLGPGINPYIAHMARMYTVWSGGFEVRLTVAGSGIFAGRVMAALVPPGISPNE FT VRNPGAFPHNILDARTTSPITMVIPDVRPGDYHGPGDNTPTTSIGLWVFNPLINPFAGG FT SATITSVTITVETRPLPEFTLAILKPPDQETVDGAHPNGLLPRRLGRSRGNRVGGVVTA FT LSVVSIVDQVNHHWNASGATYGWSVGPPAPLVCNVDNGTYTTGYLNIDADSKGPIMPNI FT PNNWPDFCVSSIDHTGTTVGQWNQGGVVGNINFFDDNWDVTEGVVANGMTFCGTFAGGS FT AVVVTLEKEINAANMGIALEVKAGGTATSAVSNVIFTPMWQTTSVSRSPPVVPMYGVRR FT SYGPIGPNHPVVWHEHLLRDHPTLASVTCSQLAHTSDVLESGPVNVPSGQMAVFEVNSN FT GNTFQLGIASSGVAYTGGTPGTVVDLDPDTTFTFTGLFTINTALMGPAGAAGFRHG" FT CDS 6857..7471 FT /codon_start=1 FT /product="VP2" FT /note="ORF2" FT /db_xref="UniProtKB/TrEMBL:I2APU8" FT /protein_id="AFJ39356.1" FT /translation="MGSWTQGMIGLAGFTVDAITGLGALGVQAQNAETNRQLATLQAEA FT LKQQLAANKLSMEQWEKINNPASMLSSATAAGFDPVAAMQIASRGTVSRWHGGVQLAPL FT SQVQVDGLRGTALARAGLQAGGTFTTGVRGPYRLQAGRPVYRRDSISSWAESTSTMSTR FT VRSPSVTSASSSGSSTSSLGPRPVVVIPGSTSATWVPGSEA" XX SQ Sequence 7696 BP; 1501 A; 2339 C; 2290 G; 1566 T; 0 other; gtgatagtga tggcggcgtt aagccgtgtg ctcgccccag ccccccccag ggggggttgg 60 ggcaagcgtt tcaggcgctt gcctgaccat tatttttctt gcccaccctg taaagggtgg 120 acagagtcca ggccacatct cctggacatt gaacccgcgc cctgttgggt gcgggtgaag 180 ccgccgcgca agcggcggta cgtccccgaa gggcgattgg ctgatttgtt tcagccacgc 240 gactctgggg acacactcct gcgcgatgcg tgggaaagtt tcctaggcgt gcccctccca 300 tctgccacca acccgcggcc gctcacgctt gccgggatgc gcgagctata cgtttacctc 360 acggagctcg cgcctggcgg ggacgcgggg ccttaccacg ccgggttcaa ccgggcccag 420 gtcgaggccg cgattgcgac gtttgaggcc acgcttcctc cagagatgct cgcaccccgc 480 cggcagcggg tcgaggtgcc cccagacatg cttgagctgc tctacgacgc caaaggttgg 540 gatgacatac cgggcccagg catgcgcgac atcttccggg ccatgtggac caagctgcgg 600 aaaggggtaa acgatgcttt catcccgctt gcgcagtgcc gcgactggat cacacagaac 660 ctaaacccag gcatctctgt taaagaggct gtcttggcgt tcatcactgg tggccagaac 720 gcactgcgtg ggaatgctgc agtccttgca gcgaaggtgc ttgcgctgct caagccaacc 780 accctcgcaa tcattctctc tcaacatcgc aacactactg ccggttgggt gctcacccta 840 accgcacttg tggagctgta tgccggcctt ggccccatct gcgaatgggt agttgacctg 900 ttaaaagcgc tgcttgagtt cgctggtggg gttgctggat gtatttttga ccagttcacc 960 acctggtatg gtcgactgac gcagtctgag gggccagcag ggtatgcggc cgtgggtgca 1020 gggctcatcg gcctcatcta cctgtggtac gcgggtcgac tccctggcac cagcgcaacc 1080 acacgcctgc tcaaggcgtg tggggcggtc accaccggcg ttggggcagt gcgcgcagtc 1140 aagtggatca ttgacatgtt ccgcgagcaa catcaagctg gcatggtgcg tatgttcatg 1200 gcaagaacag cagcgcttct cgactgcatt gaggagaacc catctcccaa cagtgaagag 1260 gcgcgtgggt ggttgtctag cctagaagtg attgcggggg agggggagga gatgctctta 1320 ctacttggtg cgtcgcccct tgccggcatg gttcgcagta tgtgcgaacg ggttcagggt 1380 gcagcctcag ccatgcgagc gcaccttgca ctcaatacca cccgtaagca accaacaatg 1440 gttgtctttg ggggcccacc tggcattggt aagaccactc tctgccatgc cattgctgcc 1500 aaaatgggac tgcccacctc cactttcagc ctgctcaatg accaccacga cacttacact 1560 ggcaaccctg tcgcaatttg ggacgagttt gacacggata agaacggcga ctttgtcgag 1620 atggtggtgt ccctagtgaa cacccagccg tgcccgctgg actgtgacag gattgagaac 1680 aagggtcggg tgtttaccag cagcatcatc ttggccacca ccaactacgc cacccctgtc 1740 ctcccggagc acccgcgatc tgaggccttc tggcgtcgaa tcatgtatgt tgacgtcaag 1800 tgcgcggact acgagaagtg ggtccgggac aaccctggca agcctgcccc ccccaccctg 1860 tttaagagtg acttctccca cctgcagatg accatccgac cgttcatggg cgtggacgac 1920 caaggcacgc ttcttgatgg ccgcactgct cggggcacaa gcgtgaccct ctctgggatt 1980 gtacggcgcc tcaacaaatc atataaggct gagggcgggc cgcctaagcg ccacctctgg 2040 gtgcaggttc cgcatgacca actagagcag tcggccggcg cattgcgggg gtggagggtg 2100 tgggcttgtg ccccttgtga agtagtggtg tcgcctgaaa gttgccgtgt ggtgaacggg 2160 tctgggctca acaccatctt cgtggcaagc gtgccaccaa cagtggagca aatggagttt 2220 tgtctccacg tgccaaccaa aggcatggcc aacatccaac caaatatgtc ccgagcgttt 2280 gacagctcaa tgtgggggtc tccactcgac ctgtttgtcc acaacgtgtc agtgtcgtcc 2340 tcaaccatgc gcgacatcgt gttcggtgtg agcggtgcca ctgtccacgt atgggatgac 2400 cccaaaacca tgcccgtcat acctgtcaca cgcactgtgg tcgctgccgg cctccctgca 2460 gttgtggctg gcatatggcg tcacgtgtgc tggcgctcgg cgcctggtgc agtgcgcgca 2520 atgagggctg catggtctgg cgggatagac aacttcatcg actgtttccg ggccttggca 2580 gggacgcgct tcacggcaaa cccagtttcc accctgttcc gcacgcccgg tggtgacatc 2640 tccctttaca cctacaagga gggaatgtac gtgtgtgcaa caccaggcag ggtgcctgtt 2700 gtggggggtg gagactttcc aaaccttggc acctccatac cagacaacac aagctggtgg 2760 gatttgctgt cccttttcct tgatgtgctg gtcaccaatt atctgcccct catcctcgtc 2820 ggggtgacaa tgtacaacgt gaccacgctg atgcgccgcg gccagggcca cgcggaagcg 2880 aagggcaaga caaaacatgg tcgcggtcac gcgttgcgcg acagtgagta cgaggagtac 2940 aaggacctga tgcgcgactg gcggcgtgac ctcactgtgg cagagttcag ggagattcgc 3000 gaccgcgcgc ttgctggcgg caatgacgct gcatcccagc ggtatcgggc gtggctagac 3060 gtgcgcgaat tgcgcatgca aaacaatgcc taccgttatg acgtggtgga cgtgattggc 3120 cgccaggggc acacggtgca ggcagtgcgg caggacctca tccgtgcacc ccgcaagcca 3180 ctccgggacg actatgagga tgcttactgc atggaagggg ctggctcccc tttggtgcct 3240 gtgatcactg gtggcgtgcg cgtggggtgg gcgtgccacg ttgggaatgg ccgctttgtc 3300 acgtgcgcac accttcttga cggcaccacc actgtggcag atgatgtccc aagggatgtc 3360 gtgatccacc aggacaccgc gcagttccgc actaacttca acggccccgc ataccagctt 3420 ggcgaagggc tcccagagta cttttccggc cagcgcctcc cagtgcgcgt cattggcgag 3480 ggagtgtttg agacatccac gaccactgtt gatggttggc agtactcagt tgtcgcgggc 3540 gttgacacct gcccgggcga ttgcggactg ccactcttca acgcccgcca ccagctcgtt 3600 gcaatccacg ccgcgtcctc agtggacagg tctgtcaagc ttgccaaccg tgtgtttggc 3660 gtcaagggga ccgccaatac ctttgcgtgg aagggactcc aggtcaagga atcaggccgg 3720 aacgtgggcg gcatgccaac tggcacccgg tatgggcggt caccagcaca ccccaagcag 3780 caggaagggg agacgtatga gcctgcgccg ctgggcgcgg gtgacccgcg ctatacccac 3840 tcccaggtgg aaatgctggt taacgggtta cgaccttacc aggagacgcc ccctgccgcg 3900 tttgacctca acatactgcg tgcggccgtc aaccactgcc gcgggtacat tcactctgtc 3960 attgggaacc accgcagccc aaatctgcca tttaacctgg cggctggcag catggatcgg 4020 gcgacagcag caggcccgtt cgtggcaggt ttgaaaggag attactggga tgaagacgct 4080 ggccgctatg ttggtgcgct cggggaccac attgagcgca cgtgggacgg cgcagcgcgc 4140 ggggcaccac catgcaatgc gtataagctt gcgctaaaag acgagctcag gcccattgag 4200 aagaaccagc aagggaaacg gcgacttctg tggggggccg atgctgggct gacgtgttgt 4260 gcggctgccg ttttcactgg ggtcgcgaac aggctgaaag aggtcgtgcc gctgaccccg 4320 gtctgcgttg ggataaacat ggactcagcc caagttgagg tcgtccaccg ggcccttcaa 4380 gaccggacag tttacaacgt agattacacc aagtgggact ccacaatgca gccagccatc 4440 attgctgagg caatacagat tatgtgtgac ttgtcagagg acaccccgat gacaacagca 4500 gtcggaaatg cgctcaaatc acctgctctc gggttctttg aggacatagt gttcaccacg 4560 cgcaccgggc tcccgtctgg aatgccattc acctcccaga tcaattcact atgccacatg 4620 atcttgattg cgtactgcat cctgaaggtc taccacacgg ctgaagtggc gtaccctggc 4680 aacatcttca atggcgaaac catcttcacg tatggcgacg acgggctgta tggtttcacg 4740 cgcgccactg catcggtgtt tgagcatatc attgaggtca tgagatccgt gggcctgcag 4800 ccaacagccc cagacaagtc ccccgagatc aagccggtca ccggggaccc agtgttcctt 4860 aagagatcaa tccaccggta tgctgatggt cgggtgcgcg ctctaattga ccctacgagc 4920 ctgactcggc agtgttattg ggttaagggt ccccgtcacc gagacccccg ggaggtgacc 4980 taccctgacc ccgttatacg cggggttcaa cttgacaacg tgctcattgc tgcctcccaa 5040 caccccatgg acgtatggga gcccatctac cagcttgtga tcaagacagc ggcaggcgag 5100 cgggcaccgc tctctatatt ggaccgccac caggccaacg ccgcgtacat catgtggtac 5160 agcggtgcta ccagcggtgg cgacgccgcc agcgatgagg ctggcgacaa aatagtgttt 5220 gtgatggagg gcgatcgtgc gcccgcgccg tccaccgctc cggcggtgga cggcgtggtg 5280 gggcccaatg actctgccct tgtgccaacg ggcggccctg cgccatctgc agcggcccag 5340 gtggctcagg ttgctgccgc cacgggcgcc gtgagtacca acgtgccgcc tgatattgga 5400 atgacttttg tgatgttgac tcaggtcact tggactagtc ggcagccgca gggcaccctc 5460 ctgggctccc tccaacttgg gcccgggatt aacccgtaca ttgcgcacat ggcgcgtatg 5520 tacacagtgt ggtctggggg gtttgaggtc cggctgaccg tggctggctc tgggatattt 5580 gccggacggg ttatggcggc actcgtcccc cccggcatct ccccaaatga ggtgcgtaac 5640 ccgggcgctt tcccacacaa cattcttgac gcccgtacca cctcacccat cacgatggtc 5700 atccctgacg tgcgccccgg cgactaccat gggcccggcg acaacacacc aacaacatca 5760 attggcctgt gggtcttcaa ccccttgatc aacccgtttg ccgggggcag tgcaacaatc 5820 accagcgtta ccatcacggt ggaaaccagg cctttgccag agttcacgct cgccatcctc 5880 aagcctcccg accaagaaac tgtcgacggc gcccacccca acggcctatt gccccgtcgg 5940 cttggccgat cccggggtaa tcgggttggc ggcgtggtga cggcgctgtc tgtggtgtcg 6000 attgtggacc aagtgaacca ccattggaac gctagcggcg ccacctacgg gtggagcgtc 6060 gggccccccg ccccgctggt ctgcaatgtg gacaatggga cttacactac cgggtacctc 6120 aacatagacg cagactccaa gggacccatc atgcccaaca ttccaaacaa ctggccagat 6180 ttctgtgtca gctcaattga ccacacaggc accaccgtgg gccagtggaa ccaagggggt 6240 gtggttggca acatcaactt cttcgatgac aattgggacg tgactgaggg tgtagtggcc 6300 aatggtatga cattttgtgg cacgttcgcc gggggcagcg ccgtcgtcgt gacgcttgaa 6360 aaggagatca atgctgccaa catggggata gcgcttgaag tcaaggctgg gggcactgcc 6420 acgagtgccg tgtcaaatgt aatcttcact ccgatgtggc aaacaacctc tgtatcccgg 6480 tcaccaccag tggtgccaat gtatggcgtc cgccggtcgt acgggcccat tggccctaac 6540 cacccggtgg tgtggcacga gcacctcctc cgggaccacc ccaccttggc aagcgtcacg 6600 tgttctcaac ttgcccacac gtcagacgtc ctcgaatcgg gaccagtcaa cgtgcccagt 6660 ggccagatgg cagtttttga agtcaactcc aacgggaata cattccagct tggaattgcc 6720 tcttcagggg tagcatacac tggcggcacg ccgggcacgg tggtcgacct agaccctgac 6780 accaccttca cttttactgg attgttcaca atcaacactg ccctcatggg accggcaggg 6840 gctgcagggt tccgccatgg gtagctggac acagggaatg attggcctcg cgggcttcac 6900 cgtcgatgcc atcaccgggc ttggcgcact aggcgtccag gcgcaaaatg ctgagacaaa 6960 ccgccaactt gcaaccctcc aggccgaggc tctcaagcag cagcttgctg ctaacaagct 7020 atccatggag cagtgggaga agattaacaa ccccgccagc atgctctcct ctgccacggc 7080 agctgggttt gaccccgtgg ccgccatgca gatcgcctca cggggcaccg tttcaaggtg 7140 gcacggcggt gttcagctgg ccccactctc ccaagtccaa gtggatggct tacggggcac 7200 ggccctggca agggccggcc tccaagccgg cggcacgttc accactgggg tccgcggccc 7260 ctacaggctg caggctggtc gccctgttta tcgcagagac tccatctctt cctgggctga 7320 gtcgacatca actatgtcca cgcgggtgcg gtccccttca gtgacatccg cctcctcaag 7380 cggatcgtca acgagctcac ttgggccccg cccggtggtc gtcatcccag ggtctacctc 7440 tgcaacttgg gtgccaggct cagaggcctg atgtgcacgg gtgggtccac tgatgctggt 7500 ctttcccagc cagtctttct atctttcctt tctttgccct cttttgtttc tgtggcatcc 7560 tgcacgcgtt cgggcaggtt caaatgcgat taagcgatcg cagtgtcatg cattttcttc 7620 cctcttgcgc tgcacacgcg ttcgggtgca ctaagccatg ttaagcgaca tgggcgcctc 7680 cagtcggaga tgggga 7696 //