Dbfetch

Dbfetch

ID   JN848982; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   JN848982;
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DT   05-FEB-2012 (Rel. 111, Created)
DT   05-APR-2012 (Rel. 112, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate HB3 coat protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-582
RX   DOI; 10.1007/s00705-011-1195-5.
RX   PUBMED; 22278708.
RA   Niu F., Pan S., Wu Z., Jiang D., Li S.;
RT   "Complete nucleotide sequences of the genomes of two isolates of apple
RT   chlorotic leaf spot virus from peach (Prunus persica) in China";
RL   Arch. Virol. 157(4):783-786(2012).
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RN   [2]
RP   1-582
RA   Niu F., Pan S., Wu Z., Li S.;
RT   ;
RL   Submitted (12-OCT-2011) to the INSDC.
RL   State Key Laboratory of Biology of Plant Diseases and Insect Pests,
RL   Institute of Plant Protection, Chinese Academy of Agricultural Sciences,
RL   Yuanmingyuan Road West 2, Haidian, Beijing 100193, China
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DR   MD5; 04af1568608ec3fe8ee56626f29f0aa3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /isolate="HB3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collected_by="Shifang Li"
FT                   /collection_date="03-May-2011"
FT                   /clone="HB2-2"
FT                   /db_xref="taxon:12175"
FT   CDS             1..582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6VNQ7"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:H6VNQ7"
FT                   /protein_id="AEZ03860.1"
FT                   /translation="MAATLNLQLKVDRELRAFLAEGNRPLHGKTGGTVELILEPIFANI
FT                   AVQGTSEQTEFLDVEVEVKMSGDPTVLQKYNLRTVVELIKLFRTTSSDKNINALTFRQI
FT                   CEAFAPEARDGLVKLKTIGVLTNLYKTMPEVGNKYPELMFDFNKGLNPMLMNKTQRVVV
FT                   TNLNRRPLQTEFAKSENEAKIASVSNDLCI"
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SQ   Sequence 582 BP; 175 A; 115 C; 149 G; 143 T; 0 other;
     atggcagcaa ctttgaacct gcagctgaag gtggacaggg agttgagggc tttcctggcg        60
     gagggcaatc gtcccttgca tggaaagaca gggggaacag tggaactgat actggagccc       120
     atcttcgcaa acatcgcggt tcagggaacc tcagagcaaa cagaattcct cgacgtggaa       180
     gtcgaagtga aaatgagtgg ggatccaaca gtgcttcaga agtacaatct gaggacggtc       240
     gtggagctga taaagctttt tcggaccaca tcttcggaca agaacatcaa tgcccttact       300
     tttaggcaaa tatgtgaagc ctttgctcca gaggctagag atgggctggt taagctcaaa       360
     accattggtg ttctcactaa tctgtacaaa actatgcctg aggtgggcaa taaatatcct       420
     gagctcatgt ttgatttcaa caaagggctt aacccgatgt tgatgaataa aactcagaga       480
     gttgtagtaa ctaatctaaa ccgacgtcct ttacaaactg aatttgcaaa aagtgagaat       540
     gaagcaaaga ttgcttcggt ctctaatgat ttgtgcattt ag                          582
//