ID JN848775; SV 1; circular; genomic DNA; STD; VRL; 2616 BP. XX AC JN848775; XX DT 03-OCT-2012 (Rel. 114, Created) DT 29-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Dalechampia chlorotic mosaic virus isolate Venezuela:Albarico 1020:2007 DE segment DNA-A, complete sequence. XX KW . XX OS Dalechampia chlorotic mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2616 RX DOI; 10.1007/s00705-012-1451-3. RX PUBMED; 22926716. RA Fiallo-Olive E., Chirinos D.T., Geraud-Pouey F., Moriones E., RA Navas-Castillo J.; RT "Complete genome sequences of two begomoviruses infecting weeds in RT Venezuela"; RL Arch. Virol. 158(1):277-280(2013). XX RN [2] RP 1-2616 RA Fiallo-Olive E., Chirinos D., Geraud-Pouey F., Navas-Castillo J., RA Moriones E.; RT ; RL Submitted (12-OCT-2011) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Instituto de Hortofruticultura RL Subtropical y Mediterranea 'La Mayora', Estacion Experimental La Mayora, RL Algarrobo-Costa, Malaga 29750, Spain XX DR MD5; 8bf7dc2aeef78d1216c209764b23a85c. XX FH Key Location/Qualifiers FH FT source 1..2616 FT /organism="Dalechampia chlorotic mosaic virus" FT /segment="DNA-A" FT /host="Dalechampia sp." FT /isolate="Venezuela:Albarico 1020:2007" FT /mol_type="genomic DNA" FT /country="Venezuela" FT /collection_date="Nov-2007" FT /db_xref="taxon:1227356" FT gene 202..960 FT /gene="AV1" FT CDS 202..957 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J9QRR8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9QRR8" FT /protein_id="AFQ93636.1" FT /translation="MPKRDIPWRSMAGTSKVSRSVNRSPRGGSGPKFDKASAWVNRPMY FT RKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(954..1352) FT /gene="AC3" FT CDS complement(954..1352) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:J9QQE5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9QQE5" FT /protein_id="AFQ93637.1" FT /translation="MDSRTGESITAAQAENSVFIWEVPNPLYFKITRVEDPMYTRNRVY FT HIQIRFNHNLRKELGLLRAFFNFQVWTTSLTASGQIYLNRFRHLVLLYLDRLGVIGINH FT VIDAVSFAVNRPYVNAVLENHDIKFKIY" FT gene complement(1099..1488) FT /gene="AC2" FT CDS complement(1099..1488) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:J9QP19" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9QP19" FT /protein_id="AFQ93638.1" FT /translation="MRNSSSSKPPSIKAQHRASKRRAIRRRRLDLNCGCSIFLHINCID FT HGFTHRGEHHCGSGREFRFYLGGSKSPLFQDHQSRGSYVHQEQSVPHPDQVQPQPEEGI FT GSSQSLLQLPSLDDFSDSFWADLFK" FT gene complement(1430..2485) FT /gene="AC1" FT CDS complement(1430..2485) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:J9QIU8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9QIU8" FT /protein_id="AFQ93639.1" FT /translation="MGPPRKFRINAKNYFLTYPRCSLTKEGALLQLQKLKTPTNIKFIR FT VSRELHENGEPHLHVLIQFEGKYQCANERFFDLVSPTRSAHFHPNIQGAKSASDVKTYV FT EKDGDFIDFGEFQIDPRSSRGGQQSANDSYAKVLNSNSVSEALNILREEQPKDFVLQQH FT TLRSNLERIFAKPPPPWVPPFQLSSFTAVPDEMQEWADDYFSVDAAARPERPISLIVEG FT GSRTGKTMWARALGTHNYLSGHLDFNARVYSNDVEYNVIDDVTPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGCSYKDFLEKEENAGLKAWTLKNAKFVFLE FT APLYQGTAQSQ" FT gene complement(1978..2328) FT /gene="AC4" FT CDS complement(1978..2328) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9QSI4" FT /protein_id="AFQ93640.1" FT /translation="MGSLISMCLSSSKVNTNVLMKDSSTSSPQPGQHISIQTFRELNQH FT LMSRPTWRKTETSLILENFKSIPVPPEEVNNLPMTPMPRFSTQTLSPRPSIYSEKSSPK FT TSCSSSTRYVQT" XX SQ Sequence 2616 BP; 679 A; 562 C; 613 G; 762 T; 0 other; accggatggc cgcgcgattt ttcgcttggg cccggcccag gtccaagcgc tctcgttttt 60 atttgattcc tctctgggac cacttaaata ctcttgacca atcatattgc gtctgacgcg 120 cctacatatt ttgacttgct gactaagtag tggtcccttg tatttaagtg atattgacag 180 agcgtttaat ttaatttgaa aatgcctaag cgggatatcc catggcgttc aatggcggga 240 acttcaaagg ttagccgctc tgtcaatcgt tcccctcgtg gtggatcggg ccctaagttt 300 gacaaggcct cagcttgggt taacaggccc atgtacagga agcccaggat ttatcgaacg 360 ttgagagggc ccgatgtccc caagggatgt gaaggtccat gtaaggttca gtcatacgag 420 cagcgacatg acatctctca tgttggcaag gtcatgtgta tatctgacgt gacacgtggt 480 aacggtataa cccatcgtgt tggtaagcgt ttctgtgtta agtctgtata tattcttggg 540 aagatatgga tggatgagaa tatcaagctg aagaaccaca cgaacagcgt catgttttgg 600 cttgttcgag accggagacc ctatggaacc cctatggact ttggtcaagt cttcaacatg 660 ttcgacaacg agcctagtac tgctactgtt aagaacgatc tgcgtgatcg ttatcaggtg 720 atgcacaggt tctatgctaa ggtcactggt ggacagtacg caagcaacga gcaggcattg 780 gttaggcgct tctggaaggt caacaactac gtggtataca accatcagga agcagggaaa 840 tacgagaatc atacggagaa cgccttgtta ttgtatatgg catgtactca tgcatcaaac 900 cctgtgtatg caactttaaa aattcggatc tatttttatg attcgataac aaattaataa 960 attttgaatt ttatatcatg attctcgagt acagcattta catatggtct attaacggcg 1020 aagctaacag catcaattac atgattaata ccaattactc ctaacctatc taagtacaac 1080 aacactaaat gtctaaacct atttaaataa atctgcccag aagctgtcag agaagtcgtc 1140 cagacttgga agttgaagaa ggctctgaga agacccaatt ccttcctcag gttgtggttg 1200 aacctgatct ggatgtggta cactctgttc ctggtgtaca taggatcctc tactctggtg 1260 atcttgaaat agaggggatt tggaacctcc caaataaaaa cggaattctc tgcctgagcc 1320 gcagtgatgc tctccccggt gcgtgaatcc atggtctatg cagttgatgt ggagaaatat 1380 ggaacagccg cagttcaagt cgagtcgcct tctacgtatg gctcttcttt tactggctct 1440 gtgctgtgcc ttgatagagg ggggcttcga ggaagacgaa tttcgcattt ttaagcgtcc 1500 acgccttcag acctgcattt tcctctttct cgaggaaatc tttatagctg cacccctctc 1560 ctggattgca cagcacgatt gatgggatcc ctcctttaat ttgaactggc tttccatatt 1620 tacagttgga ttgccaatcc ttttgggccc caatcaactc tttccagtgc tttagcttta 1680 ggtactgcgg agtgacatca tcgataacgt tatactccac atcattggag taaaccctag 1740 cattgaaatc aagatgaccg ctcagataat tatgtgtacc taaagctctg gcccacattg 1800 tctttcccgt tctagaaccc ccttcgacga tcaaactaat aggacgttct ggccgcgcag 1860 cggcatcaac actgaaatag tcatcagccc attcttgcat ctcgtctggc acagcagtaa 1920 atgaagatag ctgaaatgga gggacccacg gaggtggagg tttagcaaat atacgttcta 1980 ggtttgaacg taacgtgtgc tgctggagca cgaagtcttt gggctgctct tctctgagta 2040 tattgagggc ctcggagaca gagtttgagt tgagaacctt ggcataggag tcattggcag 2100 attgttgacc tcctctggag gaacggggat cgatttgaaa ttctccaaaa tcaatgaagt 2160 ctccgtcttt ctccacgtag gtcttgacat cagatgctga tttagctccc tgaatgtttg 2220 gatggaaatg tgctgacctg gttggggaga cgaggtcgaa gaatctttca ttagcacatt 2280 ggtatttacc ttcgaactgg ataagcacat ggagatgagg ctccccattt tcgtgtaatt 2340 ctctggacac acgaataaac ttgatatttg taggtgtttt taacttctgt aattgcaaaa 2400 gagccccttc ttttgttaaa gagcacctag ggtatgtgag gaaatagttt ttggcgttta 2460 tgcgaaattt acgaggaggc cccataactt tcaatatttg caaaacgaac cggtgtatag 2520 aaaactggct gatatgaact ggtgtatggt gtgctactta tagaagtcct ctctatttca 2580 tttgtagggg cattttcggc catccgctat aatatt 2616 //