ID JN831446; SV 1; circular; genomic DNA; STD; VRL; 2757 BP. XX AC JN831446; XX DT 29-JAN-2012 (Rel. 111, Created) DT 29-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Croton yellow vein mosaic virus isolate CYVMV-Bang-Cr2 from India, complete DE genome. XX KW . XX OS Croton yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2757 RA Phaneendra C., Mandal B.; RT ; RL Submitted (10-OCT-2011) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New RL Delhi, Delhi 110012, India XX DR MD5; a3463236dc3b81284460f9caefd4d645. XX FH Key Location/Qualifiers FH FT source 1..2757 FT /organism="Croton yellow vein mosaic virus" FT /host="Croton bonplandianus" FT /isolate="CYVMV-Bang-Cr2" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="plant showing yellow vein mosaic FT symptoms" FT /collection_date="16-Aug-2007" FT /db_xref="taxon:207697" FT CDS 145..501 FT /codon_start=1 FT /product="pre-coat protein" FT /db_xref="GOA:D3HIF7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HIF7" FT /protein_id="AEY78476.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDL FT ISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTHVP FT EAQDVQDVQKPRCP" FT CDS complement(296..613) FT /codon_start=1 FT /product="AC5b" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H2E7U3" FT /protein_id="AEY78482.1" FT /translation="MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTTLRDIWASV FT HPVHPGLPVHGSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHN FT F" FT CDS 305..1075 FT /codon_start=1 FT /product="coat protein" FT /note="AV1" FT /db_xref="GOA:Q8B8N7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8B8N7" FT /protein_id="AEY78475.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(740..1144) FT /codon_start=1 FT /product="AC5a" FT /db_xref="GOA:H2E7U5" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:H2E7U5" FT /protein_id="AEY78481.1" FT /translation="MECITSRCICRPIVFNKIQSLLMLICYRIVEVTPNFQSSIHRVRG FT MSTCHIQQQSILSVIFILPSFLVIIHHIIVNTIEFPNYSLFLSSILTTCDCCLKPPQHL FT KTITLVVLHSSRRGLIIINIEHLLEIIWGS" FT CDS complement(1078..1482) FT /codon_start=1 FT /product="replication enhancer protein" FT /note="AC3" FT /db_xref="GOA:H2E7U6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H2E7U6" FT /protein_id="AEY78479.1" FT /translation="MDSRTGELITAAQAQNGVFIWEIRNPLYFKITQHHNRPFLMKEDI FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINT FT VIKSVDHVLWNVLHHVVYVDQSYSIKFNLY" FT CDS complement(1223..1627) FT /codon_start=1 FT /product="transcription activator protein" FT /note="AC2" FT /db_xref="GOA:H2E7U7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H2E7U7" FT /protein_id="AEY78478.1" FT /translation="MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIA FT CHNHGFTHRGTHHCSSSTEWRVYLGDSKSPVFQDNTTPQQAIPNEGRHHHRSDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGI" FT CDS complement(1530..2615) FT /codon_start=1 FT /product="replication associated protein" FT /note="AC1" FT /db_xref="GOA:H2E7U8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2E7U8" FT /protein_id="AEY78477.1" FT /translation="MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILKNISCPSNRLFIR FT VAQEKHQDGSMHIHALIQFKGKSKFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYI FT DKDGDTIDWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKEKLPKDFVLQFH FT NLNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENIVDAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWALKNATFITLEGPL FT YSGSNQSAAQDSQEGDQASTS" FT CDS complement(2120..2458) FT /codon_start=1 FT /product="regulatory protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H2E7U9" FT /protein_id="AEY78480.1" FT /translation="MGLCISMPSSNSKVNPSSETPDISMSLTLIAPPNSIQTSRELSPA FT PTSSPTSTRTVTPSTGESFRSMDDLQEGDNRQQMTLTQQHLTQAVSQRLLESLRKNSLK FT ILYCNFII" XX SQ Sequence 2757 BP; 742 A; 549 C; 655 G; 811 T; 0 other; accggatggc cgcgaaaaaa aatagtgggc cccatggcgc actaactgac aaagacgtct 60 ccaccaatga aaagagctcc tcagagctta attgttttgt ggtcccctat ttaaacttcg 120 ccaccaagta gtgcattgcg cactatgtgg gatccattag taaacgagtt tcccgaaacc 180 gttcacgggt ttagatgtat gttagcagtt aaatatctgc agttagtaga gaagacttat 240 gctcctgaca cattggggca cgatttaatt agggatttaa tttcagtaat tagggctaga 300 aattatgtcg aagcgtccag cagatataat catttccacg cccgcttcga aggtacgccg 360 tcgtctcaac ttcgacagcc catatgtgaa ccgtgctgct gcccccattg tccgcgtcac 420 caaagcaaag gcatgggcga acagacccat gtaccggaag cccaggatgt acaggatgta 480 cagaagccca gatgtcccta agggttgtga aggcccatgt aaggtgcagt cttttgatgc 540 gaagaatgat attggtcaca tgggtaaggt tatttgtctt tctgatgtta ctaggggtat 600 tgggctgacc catcgagtag ggaaacgttt ctgtgtgaag tcattgtatt ttgttggcaa 660 aatatggatg gacgagaaca tcaagaccaa gaaccatacg aatactgtta tgttttggat 720 tgtgagagat aggcgccctt caggaacccc aaatgatttc cagcaagtgt tcaatgttta 780 tgataatgag ccctctacgg ctactgtgaa gaacgaccag cgtgatcgtt ttcaggtgtt 840 gaggaggttt caagcaacag tcacaggtgg tcaatatgct gctaaggaac aagctataat 900 taggaaattc tatcgtgtta acaattatgt ggtgtataat caccaggaag ctgggaagta 960 tgaaaatcac actgagaatg ctttgttgtt gtatatggca tgtactcatg cctctaaccc 1020 tgtgtatgct actttgaaag ttaggagtta cttctacgat tctgtaacaa attaacatta 1080 ataaagattg aattttattg aatacgattg gtctacatat acaacgtgat gtaatacatt 1140 ccataataca tgatcaaccg atttaattac agtgtttata ctgataactc ctaaattatt 1200 taagtattta agaacttgag tcttaaatac ccttaagaaa cgaccagtcg gaggctgtga 1260 ggtcatccag attcggaagg ctaggaaaca tttgtgtatc cccaacgctt tcctcaggtt 1320 gtgattgaac tgtatctgaa cggtgatgat gtcttccttc attaggaatg gcctgttgtg 1380 gtgttgtgtt atcttgaaat acaggggatt tcgaatctcc cagataaaca cgccattctg 1440 tgcttgagct gcagtgatga gttcccctgt gcgtgaatcc atggttgtgg caggctatgg 1500 atatgaagta tgaacaccca cacggtagat caactcgtcg acgcctgatc cccttcttgg 1560 ctatcttgtg ctgcactttg attggaacct gagtagagtg ggccttcgag ggtgatgaag 1620 gtcgcattct ttaaagccca attcttgagt gcagcatttt tctcttcatc caagaactct 1680 ttatagctgg agttgggtcc tggattgcag aggaagattg tgggaattcc ccctttaatt 1740 tgaactggct tcccgtactt ggtgttggac tgccagtcct tttgggcccc catgaactcc 1800 ttaaagtgct ttaggtagtg gggatcgacg tcatcaatga cgttatacca gacatcattg 1860 ctgtagacct ttgggctcaa atctaaatgg ccacataaat aattatgtgg gcctagagat 1920 ctagcccaca tcgtcttccc tgttcgactg tcaccctcga taacaatact tatgggcctc 1980 aaaggccgcg cagcggcatc gacgatgttc tcggcagccc attcctcaag ttcttctgga 2040 acttgatcga atgaagaaga ggaaaaagga gaaacataaa cctccattgg aggtgtaaaa 2100 atcctgtcta gatttgcatt taaattatga aattgcagta caaaatcttt agggagtttt 2160 tccttaatga ctctaagagc ctctgactta ctgcctgcgt taagtgctgc tgcgtaagcg 2220 tcatttgctg tctgttgtcc ccctcttgca gatcgtccat cgatctgaaa ctctccccag 2280 tcgatggtgt caccgtcctt gtcgatgtag gacttgacgt cggagctgga cttagctccc 2340 tggaagtttg gatggaattg ggtggagcta ttagggtgag tgacatcgaa atgtctgggg 2400 tttcggaact tggatttacc tttgaattgg atgagggcat ggatatgcat agacccatct 2460 tggtgtttct cttgggctac tctgataaat aatctattag acggacagga aatgttttta 2520 aggatttcga gcatttgttc tttgggtatt gggcatttgg gataagtaag gaagatattt 2580 ttggcattaa cacaaaaaga gttaatacga ggcatattga attggggaca ctcaaaactc 2640 tgaggaatgg gggactcggg ggactcattt atatggtgtc cctaaatggc atttctgtaa 2700 tttggtaaag taattcaaaa ttctcacgct ccaaaaagcg gccatccgta taatatt 2757 //