ID JN817516; SV 1; linear; genomic DNA; STD; VRL; 2749 BP. XX AC JN817516; XX DT 29-JAN-2012 (Rel. 111, Created) DT 29-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Croton yellow vein mosaic virus isolate CYVMV-Del-Cr from India, complete DE genome. XX KW . XX OS Croton yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2749 RA Pramesh D., Mandal B.; RT ; RL Submitted (05-OCT-2011) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New RL Delhi, Delhi 110012, India XX DR MD5; ee9718a9ab0744e71dd977030566d948. XX FH Key Location/Qualifiers FH FT source 1..2749 FT /organism="Croton yellow vein mosaic virus" FT /host="Croton bonplandianus" FT /isolate="CYVMV-Del-Cr" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="plant showing yellow vein mosaic FT symptoms" FT /collection_date="10-May-2008" FT /db_xref="taxon:207697" FT CDS 146..502 FT /codon_start=1 FT /product="pre-coat protein" FT /note="AV2" FT /db_xref="GOA:Q8B8N9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8B8N9" FT /protein_id="AEY78462.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDL FT ISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTYVQ FT EAQDVQDVQKPRCP" FT CDS complement(291..614) FT /codon_start=1 FT /product="AC5b" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q8B8N8" FT /protein_id="AEY78467.1" FT /translation="MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRDIWASV FT HPVHPGLPVHRSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHN FT FWP" FT CDS 306..1076 FT /codon_start=1 FT /product="coat protein" FT /note="AV1" FT /db_xref="GOA:Q8B8N7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8B8N7" FT /protein_id="AEY78463.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(741..1145) FT /codon_start=1 FT /product="AC5a" FT /db_xref="GOA:H2E7D9" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:H2E7D9" FT /protein_id="AEY78466.1" FT /translation="MECITSRCICRPIIFNKIQYLLILICYRIVEVTPNFQSSIHRIRG FT MSTCHIQQQSILSVIFILPSFLVIIHHIIVDTIEFPNYSLFLSSILTTCDCCLKPPQHL FT KTITLVVLHSSRRGLIIINIEHLLEIIWGS" FT CDS complement(1079..1483) FT /codon_start=1 FT /product="replication enhancer protein" FT /note="AC3" FT /db_xref="GOA:H2E7E0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H2E7E0" FT /protein_id="AEY78465.1" FT /translation="MDSRTGEPITAAQAQNGVFIWEIQNPLYFKITEHHNRPFLMKEDI FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQILKYLNNLGVISINT FT VIKSVDHVLWNVLHHVVYVDQSYSIKFNIY" FT CDS complement(1224..1628) FT /codon_start=1 FT /product="transcription activator protein" FT /note="AC2" FT /db_xref="GOA:H2E7E1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H2E7E1" FT /protein_id="AEY78468.1" FT /translation="MRPSSPSNAHYTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISRA FT CHNHGFTHRGTHHCSSSTEWRVYLGDSKSPVFQDNRTPQQAIPNEGRHHHRSDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGL" FT CDS complement(1531..2616) FT /codon_start=1 FT /product="replication initiation protein" FT /note="AC1" FT /db_xref="GOA:H2E7E2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2E7E2" FT /protein_id="AEY78464.1" FT /translation="MPRQHQFQIKAKNIFLTYPKCPIPKEQMLELLKNISCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNNSTQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSADAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEAYVSPFSSSSFDQVPQELEEWAAQNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWALKNATFITLECPL FT YSGSNQSAAQDSQEGDQASTS" XX SQ Sequence 2749 BP; 753 A; 535 C; 638 G; 823 T; 0 other; accggatggc cgtgaaaaaa aaaaaagtgg ccccacggcg cactaaatga caaagacact 60 cccaccaatg aaaagagctc ctcagagctt aattgttttg tggtcccata tttaaacttc 120 gccaccaagt agtgcattgc gcactatgtg ggatccatta gtaaacgagt ttcccgaaac 180 cgttcacggg tttagatgta tgttagcagt taaatatctg cagttagtag agaagactta 240 tgctcctgac acattggggc acgatttaat tagggattta atttcagtaa ttagggccag 300 aaattatgtc gaagcgtcca gcagatataa tcatttccac gcccgcttcg aaggtacgcc 360 gtcgtctcaa cttcgacagc ccatatgtga accgtgctgc tgcccccatt gtccgcgtca 420 ccaaagcaaa ggcatgggcg aacagaccta tgtacaggaa gcccaggatg tacaggatgt 480 acagaagccc agatgtccct aagggatgtg aaggcccatg taaggtgcag tcttttgatg 540 cgaagaatga tattggtcac atgggtaagg ttatttgtct ttctgatgtt actaggggta 600 ttgggctgac ccatcgagta gggaaacgtt tctgtgtgaa gtcattgtat tttgttggca 660 aaatatggat ggacgagaac atcaagacca agaaccatac gaatactgtt atgttttgga 720 tcgttagaga taggcgtcct tcaggaaccc caaatgattt ccagcaagtg ttcaatgttt 780 atgataatga gccctctacg gctactgtga agaacgacca gcgtgatcgt tttcaggtgt 840 tgaggaggtt tcaagcaaca gtcacaggtg gtcaatatgc tgctaaggaa caagctataa 900 ttaggaaatt ctatcgtgtc aacaattatg tggtgtataa tcaccaggaa gctgggaagt 960 atgaaaatca cactgagaat gctttgttgt tgtatatggc atgtactcat gcctctaatc 1020 ctgtgtatgc tactttgaaa gttaggagtt acttctacga ttctgtaaca aattaatatt 1080 aataaatatt gaattttatt gaatatgatt ggtctacata tacaacgtga tgtaatacat 1140 tccataatac atgatcaact gatttaatta cagtgttaat actgataact cctaagttat 1200 ttaaatactt aagaatttga gtcttaaaga cccttaagaa acgaccagtc ggaggctgtg 1260 aggtcatcca gattcggaag gctaggaaac atttgtgtat ccccaacgct ttcctcaggt 1320 tgtgattgaa ctgtatctga acggtgatga tgtcttcctt cattaggaat ggcctgttgt 1380 ggtgttctgt tatcttgaaa tacaggggat tttgaatctc ccagataaac acgccattct 1440 gtgcttgagc tgcagtgatg ggttcccctg tgcgtgaatc catggttgtg gcaggctctg 1500 gatatgaagt atgaacagcc acacggtaga tcaactcgtc gacgcctgat ccccttcttg 1560 gctatcttgt gctgcacttt gattggaacc tgagtatagt gggcattcga gggtgatgaa 1620 ggtcgcattc tttaaagccc aattctttag tgcagcattc ttctcttcat ccaagaactc 1680 tttataactg gaattgggtc ctggattgca gaggaagata gtgggaattc cgcctttaat 1740 ttgaactggc tttccgtact ttgtatttga ttgccagtcc ctttgggccc ccatgaattc 1800 cttaaagtgc tttaggtaat ggggatctac gtcatcaatg acgttatacc aggcatcatt 1860 attgtagacc tttgggctaa ggtctagatg tccacacaaa taattatgtg gtccgagtga 1920 tctggcccac atcgtcttgc ccgttctact atcaccctct atcactatac ttatgggcct 1980 caaaggccgc gcagcggcac tgacaacgtt ttgggcagcc cattcctcaa gttcttgtgg 2040 aacttgatca aaagaagaag aagaaaaagg agaaacataa gcctccaccg gaggtgtaaa 2100 aatcctatct aaattacatt ttaaattatg atattgaaaa ataaaatctt tagggagttt 2160 ttccctaatt attgctaaag ctgcgtcagc tgaacctgca tttagggcct ctgctgctgc 2220 atcattagct gtctgttgac ctcctcgagc agatcttcca tcgatctgaa actgacccca 2280 gtcgatgtaa tcaccgtcct tctcgatata ggacttgaca tcggaactgg actttgctcc 2340 ctggaagttt gggtggaatt gggtggagtt attagggtga gtgacatcga aatgtctggg 2400 gtttctgaac tgggatttac ctttgaattg gatgagggcg tggatatgca ggctcccatc 2460 ttggtgtttt tcttgagata ctctgataaa taatttatca gaaggacaag aaatgttttt 2520 aagtagttcg agcatttgct ctttgggtat tgggcattta ggataagtga ggaagatatt 2580 ttttgcctta atttggaatt ggtgctgacg tggcatattg aattgggtgc tctcaaaact 2640 ctgaggaatg gggggctttg ggtgcctatt tatagtgagc tcccaaatgg cattttcgta 2700 attacgaaag aaatttcaaa attcccaaag cggccatccg tataatatt 2749 //