ID JN801039; SV 1; linear; viral cRNA; STD; VRL; 6794 BP. XX AC JN801039; XX DT 07-FEB-2012 (Rel. 111, Created) DT 18-APR-2012 (Rel. 112, Last updated, Version 3) XX DE Guaroa virus strain BeH22063 RNA-dependent RNA polymerase gene, complete DE cds. XX KW . XX OS Guaroa virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-6794 RX PUBMED; 22278828. RA Chowdhary R., Street C., Travassos da Rosa A., Nunes M., Tee K.K., RA Hutchison S.K., Vasconcelos P.F., Tesh R., Lipkin W.I., Briese T.; RT "Genetic characterization of the Wyeomyia group of orthobunyaviruses and RT their phylogenetic relationships"; RL J. Gen. Virol. 93(Pt 5):1023-1034(2012). XX RN [2] RP 1-6794 RA Tee K.K., Briese T.; RT ; RL Submitted (30-SEP-2011) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 West 168th RL Street, New York, NY 10032, USA XX DR MD5; cd0e3c0135d3230384a0e91d44eb10b5. DR EuropePMC; PMC3541803; 22278828. DR EuropePMC; PMC4345823; 25695188. XX FH Key Location/Qualifiers FH FT source 1..6794 FT /organism="Guaroa virus" FT /segment="L" FT /strain="BeH22063" FT /mol_type="viral cRNA" FT /db_xref="taxon:80941" FT CDS 44..6739 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="RdRp" FT /db_xref="GOA:H6V7I4" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:H6V7I4" FT /protein_id="AEZ35282.1" FT /translation="MDQALYQQFVRRIENAKDATVAKDIDVDLLIARHDYFGRELCRSL FT GIQYRNDVPLVDIIIEIMPTVDPMSLEIPNITPDNYIIINGTLVLIDYKVSVSDESTIM FT TLEKYRRCMEIVRDQVELEYEIAVIRINPVSKAITISSDLFKSQYPDLTLDVNFQQFFD FT LKTYLFEKFRDDEEFMLKVSHGDFTLTAPWCYEDTNLEDHKEYLLFTNSLDQEYRELFL FT EALSFDAYGSERWNYMLHKVKDKTQAAYKDYTRKMSRDVFLMTGNYSKPSRDEIDKGWS FT EMVERIKEERILVTDKNKQKPSVHMIWSPASNREIQGSTRKLVFLSNCLMGIKENTQLS FT DVMRSIGKSMDIDGKISEYESICQNKKLIARSTIGQVKNKKITIDKVGNAMVLWEQQFI FT LNNDHFKKNNRRDFLKSFLGIGGHKVFSDKTSADIDLNKPKMLDFTNKRIIEESIFFVN FT EIGDLLSKPSPIKLSEQMFDYFLDKVSSSNPETLTIFNKIINTNYWRCIMDISNLMKNI FT LSVSQYNRHNTFRIAFCANDSLYAIVYPSADIKTKRATVVFQTITIHKNMKDVMDPGCL FT AATFKTIDGNYISLSKGIRLDKERCQRIIVSPGLFLISSILMYNNNENLKLEDVLKFCF FT FTSLSITKSMLSLTEPSRYMIMNSLAISSQVRQYISEKFSPYTKTLFSVYMTNLIKKGC FT ESANDQSNKIELKNIFMSDYELTQKGVSEERQLQSIWFRGFVSLKEYLNQIYLPFYFNS FT KGLHEKHHVMIDLLKTVAEIERDQRESLTRLWSDDFLKQHVNLPVFLHSLSKNLILDTS FT RHNHLRNKVEDRNNFKRSITTISTFTSSKACIKVGDFTDIKKKAKKQEIKDTENAQKKV FT FAANPLFFDDESQNQKINHANYETIKQCVPDYTDIVSVKVFDRLYELIKTKELEEKPFI FT NIAMDMMLKHTNHVFSFFNKGQKTFKDREIFVGQFETKMCMYVIERIAKERCKLNSDEM FT ISEPGDNKLRLLEQKSEGDIRFMIEKSRNTENPLPSLKLEINADMSKWSAQDMFFKYFW FT LIALDPILYPKEKKRILFFLCNYLNKKLVIPDELMCTLVDQKIVRENDLIHEMTNYLQT FT NSIQIRMNWLQGNFNYISSYIHTCAMLTFRDVVKETASILEGHANATSMVHSDDNQTSV FT IYFQDKLPKESLIEHTMRVFERVCLSFGCQANMKKTYLTHSIKEFVSLFNLHGEPFSVY FT GRFLLPSVGDCAYIGPYEDLASRLSAAITSIKHGCPPSYAWIAIACSHWITYSNYNMLP FT GQSNDPEAYLGIDREEIPIELGGLISAPLYMLSLCGIEAENILFLMKMLKKLVPIELLK FT ESVINQVPHINKLPELSRSEEFRLKLLRYFVLDATISSESNFGETSDMRSRAILTPRKF FT TTLGSLRKLISYNDYRNSVDDNSIIENLKYMIDNPALLVTKGENYQDYIESIRYRYNSK FT RFKESLSIQNPAQLFIEQVLFSKKPVIDYNSINEKYGPLLDSDIIDNADQIIGRLTYPE FT AFIKLYADTKQLPLLIDDLHVVYNHCICNDPLLVTCANSYNLAVQGVRVERSSNSACSM FT PEFRNMKLIHHSPALVLKAYSKGIESVPTANHEEITRDLYHLDNFLMESGILNKITATL FT SSLTDDNFETYINRLRELTRLYQISYSYIKSTEHKVKIFILPKRAHTNLEFCSLIQGNL FT VEDKKWLTMHYLKPISSGNAKGNIVRSQNSEIGIACEAFRVLAFFTDSFISEEHRVGFI FT KKVTEDHTYKGVRLDYLYHLIKEPSQRLDYLPLLFKMGDITQYDLNKFDAMMTNERISW FT NDWQTSRKLNVGSIDLTISGYLRSIRIVGIDNTLKMAEMSVPNFHPSTIHHAGFKLLNC FT KHGLRFEFMQEVILDDKINYYITYQKKRGNVYNYQVSSTTNILTRLKDFNERPKTTQRL FT IPVCPVILAVKETSYRLTMENITMLNMNNQSISRLYTFPEESCYIRRGHLSKMIFFDGP FT DLTIGNINITKLMQTQEMLTLNLNNIKSLNLIPFCNIFSCNGEKNDEIVFSDTEIEILE FT SEELESVPLFHYTYQKKHGKRLNYRDSIYESLDNSLKEFKKNFTFVGINFYSKENLGII FT SVLSTTIKQLGTNEWSTHIDNAIHIAMYRKGFDSVYHLFNFPKALYINSNPALGRLDWI FT KLNAFILNLNNEMEEPWLSMFNRFKEKASEFILGKSKEDTDTTSFVEMFKLDIGGDIND FT IED" XX SQ Sequence 6794 BP; 2549 A; 1074 C; 1199 G; 1972 T; 0 other; aaaaagaata ctaaatatcc ttcttgagaa tccaaagaag aggatggatc aggcattata 60 tcaacaattt gtgcgtcgga ttgaaaacgc caaggatgcc acagtggcaa aggatataga 120 tgttgatctg ctgattgcaa ggcatgatta ctttggcagg gaactgtgta gatcattagg 180 gatacagtac aggaatgatg ttcctctagt tgacatcata attgagatta tgccaactgt 240 agaccctatg tcattagaaa taccaaatat cactccagac aattacatta ttatcaatgg 300 cacactagta ctaatagatt ataaagtgtc tgtgagtgat gaatctacta taatgaccct 360 agagaaatat agaagatgca tggaaattgt tagagatcag gtagaactag aatatgagat 420 tgcagttatt agaatcaatc ccgttagcaa agcgataacc atatcaagtg acttatttaa 480 gagccaatac ccagacctca ccttagatgt caattttcag caatttttcg atttgaaaac 540 atacctattt gaaaaattcc gtgatgatga agaattcatg ctaaaagtgt cgcacggtga 600 ttttacattg acagcaccat ggtgttatga agacacaaat cttgaagacc acaaggaata 660 tttgctattc actaatagcc tggatcaaga gtacagagaa ttatttcttg aagcacttag 720 ttttgatgct tatggttcgg agagatggaa ctatatgtta cacaaagtca aggataagac 780 acaagcagca tataaggatt atacacgaaa aatgtcaaga gatgttttcc taatgaccgg 840 gaactatagt aaaccttcaa gggatgaaat tgataaaggc tggtcagaga tggtagaacg 900 tataaaggag gagaggatat tagtaaccga caagaataaa cagaagccat cagttcacat 960 gatatggtca ccagcatcaa acagggaaat acagggttcc actagaaaat tggtctttct 1020 ttctaattgc ttaatgggta tcaaggaaaa tactcaactg tcagatgtga tgcggtctat 1080 tgggaagtct atggatatag atgggaaaat tagcgagtat gaatctattt gccaaaacaa 1140 aaaactgata gcgagaagca caattggtca ggttaaaaac aagaaaataa caattgataa 1200 agttgggaat gcaatggttt tatgggaaca acaatttata ctgaataacg accacttcaa 1260 aaagaacaat aggagagact tcttaaagtc tttcctaggg attggtggac ataaagtatt 1320 ttcagataag acttcagcag atattgacct caataaacct aaaatgttag attttacaaa 1380 taaaaggatt attgaagaat caattttctt cgtgaatgaa ataggagact tgttgtctaa 1440 accctcgcct ataaaattga gtgagcaaat gtttgattac ttcttagaca aggtgtcatc 1500 ctctaatcca gaaacactga ccatcttcaa caaaataata aatacaaatt attggagatg 1560 cattatggat attagcaatt taatgaagaa tatattgtct gtctcccaat ataataggca 1620 caatacattt agaatagcat tctgtgcaaa tgactctctt tatgcaattg tttatccttc 1680 tgcagatatt aaaacaaaga gggcaacagt tgtattccaa actatcacaa tacataaaaa 1740 catgaaagat gttatggacc ctgggtgtct ggctgcaaca tttaaaacaa tagatggaaa 1800 ttacataagc ctaagcaaag gaatacgatt agacaaagaa agatgtcaga ggattattgt 1860 ttcccctggt ctattcttaa taagcagcat tttgatgtat aataataatg aaaatttaaa 1920 attagaagat gtccttaaat tttgcttttt cacttcctta tctattacaa agagcatgct 1980 atctctaact gaaccatccc gatatatgat tatgaattca ctagcaatat ctagccaagt 2040 aaggcaatac atctctgaaa aatttagtcc atacaccaaa acattattta gtgtttacat 2100 gactaacctt atcaaaaaag gatgtgaatc tgcaaacgac cagtcaaata aaatagaatt 2160 aaaaaatata tttatgagtg attatgaact aacacagaag ggggtaagcg aggaaaggca 2220 attacaatcc atttggttta gaggattcgt aagtctgaag gaatatttaa atcagatcta 2280 tttaccattt tactttaatt caaaaggact acatgaaaaa catcatgtta tgattgattt 2340 attaaaaaca gttgctgaaa tagaaagaga tcaaagagaa tccctcacac gcttgtggtc 2400 agatgatttc ttgaaacagc atgtcaacct acctgttttc ctacactctc tatcaaagaa 2460 tctaatcctt gacacttcaa ggcataatca tcttaggaac aaagttgaag atagaaataa 2520 ttttaagaga agtataacga caataagcac attcaccagt tccaaggctt gtatcaaagt 2580 aggtgacttt acagatataa agaaaaaggc aaaaaaacaa gaaattaagg acacagaaaa 2640 tgcccaaaaa aaagtatttg ctgcaaaccc tttatttttt gatgatgagt ctcaaaacca 2700 aaaaattaat catgcaaatt atgaaactat caagcaatgt gtaccagact atacggatat 2760 tgtatctgta aaagtcttcg atagacttta tgaattaata aagacaaagg aattagaaga 2820 gaaacctttt ataaatattg ctatggatat gatgctgaaa cataccaatc atgtattttc 2880 atttttcaat aaggggcaaa agacattcaa agatagggag atatttgtag gacaatttga 2940 aacaaaaatg tgtatgtatg ttatcgaaag gatcgcaaag gagagatgta aactgaactc 3000 agatgagatg atcagtgaac caggtgataa caaattaaga ttgcttgaac agaagtcgga 3060 gggcgatatc agattcatga tcgaaaaatc aaggaatact gagaatcctt taccatcgct 3120 aaaactagaa attaatgctg atatgtctaa atggagtgcc caagacatgt tctttaaata 3180 cttttggcta attgcactag atccaattct ctatcctaaa gaaaagaaaa gaattctatt 3240 cttcttgtgc aattacctaa ataaaaaatt agttatccca gatgagttaa tgtgcacctt 3300 ggtggaccaa aaaattgtca gagaaaatga tttaattcat gagatgacta actacctcca 3360 gacgaattca attcagataa ggatgaactg gttacaaggg aatttcaact atatctcaag 3420 ctacatacat acatgtgcaa tgctaacatt tcgtgacgtg gtgaaagaaa cagcttctat 3480 attagaagga catgcaaacg ctacctctat ggtacactca gatgataatc aaacatccgt 3540 catatatttt caagacaaac tcccaaaaga atcattgata gaacatacaa tgagggtatt 3600 cgaacgtgtc tgtcttagct ttggatgtca agctaatatg aagaaaacat acttaaccca 3660 tagtattaaa gaatttgttt cactattcaa tctacacgga gaaccattct ctgtttacgg 3720 tagattcttg ctgcctagtg ttggtgattg tgcatatatt ggtccatatg aggatcttgc 3780 tagtaggtta tcagcagcaa tcactagtat caagcatggt tgcccaccaa gttacgcttg 3840 gatagcaata gcatgtagcc actggataac atactcaaac tataatatgt tacctggtca 3900 gtccaatgat ccagaagcat atttggggat agacagagag gaaataccta tagagttagg 3960 tggtttaatt agtgcaccac tatacatgct atccttgtgt gggatagagg cagaaaatat 4020 actattcctc atgaaaatgc taaaaaaact agtacctata gaattactca aagaatcagt 4080 tattaatcaa gtaccccata taaataaatt accggaatta agtagatctg aagaatttag 4140 actaaagttg ttaagatatt tcgttttgga tgcaacaata agctcagaat caaattttgg 4200 agaaacaagt gacatgagat cccgtgctat tctgacacca aggaaattca caacactagg 4260 ttcccttagg aagttgattt cttataatga ttatcgtaat tctgtggatg ataactctat 4320 aatcgagaac ttaaaatata tgattgacaa tcctgcttta ttggtcacta aaggtgagaa 4380 ttaccaagat tatatagaat caatcaggta tagatataat tccaagagat ttaaggagag 4440 tctatctatt caaaatccag cacaattgtt tattgaacaa gtgctatttt ctaaaaagcc 4500 cgtgatagat tataacagta taaatgaaaa gtacgggcca ctacttgact ctgatataat 4560 agataacgca gatcaaatta tagggaggtt gacttaccct gaagcattta tcaaactata 4620 tgctgacaca aagcaactgc cattattaat agacgacttg catgtagtat acaaccattg 4680 tatatgtaat gatcccttgc ttgttacttg tgcaaatagt tacaatcttg cagtccaagg 4740 tgttagagta gagagatcct cgaattcagc atgttctatg ccggaattta ggaatatgaa 4800 attgatacac cattcacctg cattagtcct taaagcatac tctaaaggta ttgaatctgt 4860 tccaactgcc aatcatgaag aaatcaccag agacctttac catctagata atttcctcat 4920 ggaatcaggg atcttgaata agatcacagc taccctttca tctttaactg atgataattt 4980 tgagacatat attaatagat tacgggaatt aacaaggcta tatcaaatat catatagtta 5040 catcaaatct acagaacata aagtaaagat attcatacta cctaagagag cacacacaaa 5100 tttagaattc tgttcattaa tacaaggcaa tcttgtagaa gataagaaat ggttgactat 5160 gcattacctc aaacctatat ctagtgggaa tgccaaagga aatatagtta gatcacaaaa 5220 ttcagaaatt gggatagctt gtgaagcatt tagagtgtta gcatttttca ctgattcttt 5280 tattagtgaa gagcacaggg ttggtttcat taaaaaagta acggaagacc atacatataa 5340 gggtgttaga ttagattact tatatcactt aataaaggag cctagccaaa ggcttgatta 5400 tttaccatta cttttcaaaa tgggggatat cacacaatat gatttaaata agtttgatgc 5460 catgatgacg aatgaaagaa tttcatggaa tgattggcag acatcaagaa aattgaatgt 5520 gggatcaatc gacttgacaa taagcggata tttaagaagt atcagaattg ttgggattga 5580 caatacactt aaaatggctg agatgtctgt cccgaatttt catccatcca ctatacatca 5640 tgctggattt aaattattga attgtaaaca tggcttaagg tttgaattca tgcaagaggt 5700 tatattagat gataaaataa attattatat cacataccag aaaaagagag gcaatgtcta 5760 taactaccaa gtctcatcaa caactaatat attaacaaga ttaaaagatt ttaatgagag 5820 accaaaaaca actcaaagac taattccagt ttgcccagtg atacttgcag ttaaagaaac 5880 tagctataga ttaaccatgg aaaatataac aatgctgaat atgaataatc agtctatttc 5940 aagactatac acatttccag aagaatcatg ttacatacgg agaggccatc tatcaaaaat 6000 gatcttcttt gatggtccag acttaacaat tggcaatata aatataacca aactgatgca 6060 aacccaggag atgctaaccc taaaccttaa taatatcaag tctcttaatc taataccatt 6120 ctgcaatata tttagctgca atggtgagaa gaatgatgag attgtcttta gtgatacaga 6180 gattgaaatt ctagaaagtg aggaattaga atcagtacca ttattccatt acacttatca 6240 aaagaagcac gggaaaaggt tgaactacag agactccata tatgaatcat tagataatag 6300 cttaaaagaa ttcaaaaaga attttacgtt tgttggaatc aacttttact ccaaggagaa 6360 tctgggaatt atatcagtat tatcaactac tatcaaacaa ttaggaacaa atgagtggtc 6420 aacacatatt gacaatgcaa tacatatagc aatgtaccga aaaggttttg atagtgtcta 6480 tcatcttttt aacttcccaa aagcacttta tatcaactcc aatcctgctc taggcagact 6540 agattggatc aaattgaatg cttttatatt aaatttaaac aatgagatgg aagaaccatg 6600 gctatcaatg ttcaacagat ttaaagaaaa agcctctgag ttcatattag gaaagtctaa 6660 agaggatact gacaccactt catttgttga aatgtttaaa ttggatattg gtggtgatat 6720 taatgatatt gaagattaaa tcacgttaaa tcatataaat agtgtgcata taaaaacaaa 6780 caagtattct aatt 6794 //