ID   JN711116; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   JN711116;
XX
DT   05-DEC-2011 (Rel. 111, Created)
DT   09-NOV-2012 (Rel. 114, Last updated, Version 2)
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DE   Cucumber mosaic virus isolate YL coat protein gene, complete cds.
XX
KW   .
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
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RN   [1]
RP   1-657
RX   DOI; 10.1016/j.jviromet.2012.03.029.
RX   PUBMED; 22484613.
RA   Dai J., Cheng J., Huang T., Zheng X., Wu Y.;
RT   "A multiplex reverse transcription PCR assay for simultaneous detection of
RT   five tobacco viruses in tobacco plants";
RL   J. Virol. Methods 183(1):57-62(2012).
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RN   [2]
RP   1-657
RA   Jin D.;
RT   ;
RL   Submitted (22-SEP-2011) to the INSDC.
RL   College of Plant Protection, Northwest A&F University, Taicheng Road 22,
RL   Xian, Shaanxi 712100, China
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DR   MD5; 0689aee403c603d4be4a304628c45b7c.
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FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Cucumber mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="YL"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="27-Jul-2010"
FT                   /PCR_primers="fwd_name: cmv-f, fwd_seq:
FT                   tcctaagagtattgtgctg, rev_name: cmv-r, rev_seq:
FT                   gtttagtgacttcaggca"
FT                   /db_xref="taxon:12305"
FT   CDS             1..657
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:G9IZP5"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:G9IZP5"
FT                   /protein_id="AEU12505.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 149 A; 171 C; 157 G; 180 T; 0 other;
     atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg cttcctcctc cgcggatgcc aactttagag tcttgtcgca gcaactttcg       120
     cgacttaata agacgttggc agctggtcgt cctactatta accacccaac ctttgtaggg       180
     agtgaacgct gtagacctgg gtacacgttc acatctatta ccctgaagcc accgaaaata       240
     gaccgcgggt cttattatgg taaaaggttg ttattacctg attcagtcac ggaattcgat       300
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagttcgtaa agttcctgcc tcctcggact tgtccgtcgc cgccatctct       420
     gctatgttcg cggacggagc ctcaccggta ctggtttatc agtatgctgc atctggagtc       480
     caagccaaca ataaattgtt gtatgatctt tcggcgatgc gcgctgatat tggcgacatg       540
     cgaaagtacg ccgtgctcgt gtattcaaaa gacgatgcac tcgagacgga tgagctagta       600
     cttcatgtcg acattgagca ccaacgcatt cccacatctg gggtgctccc agtttga          657
//