ID JN710440; SV 1; linear; viral cRNA; STD; VRL; 6791 BP. XX AC JN710440; XX DT 14-FEB-2012 (Rel. 111, Created) DT 22-MAR-2013 (Rel. 116, Last updated, Version 2) XX DE Lettuce big-vein associated virus isolate Ls302 L-protein gene, complete DE cds. XX KW . XX OS Lettuce big-vein associated varicosavirus OC Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes; OC Mononegavirales; Rhabdoviridae; Varicosavirus. XX RN [1] RP 1-6791 RX AGRICOLA; IND500644021. RA Verbeek M., Dullemans A.M., van Bekkum P.J., van der Vlugt R.A.A.; RT "Evidence for Lettuce big?vein associated virus as the causal agent of a RT syndrome of necrotic rings and spots in lettuce"; RL Plant Pathol. 62(2):444-451(2013). XX RN [2] RP 1-6791 RA Verbeek M., Dullemans A.M., van Bekkum P.J., van der Vlugt R.A.A.; RT ; RL Submitted (22-SEP-2011) to the INSDC. RL Biointeractions and Plant Health, Plant Research International, P.O. Box RL 69, Wageningen 6700 AB, The Netherlands XX DR MD5; be47740289036fe9dcae993154d50535. DR EuropePMC; PMC6291800; 29878112. XX FH Key Location/Qualifiers FH FT source 1..6791 FT /organism="Lettuce big-vein associated varicosavirus" FT /segment="RNA 1" FT /host="lettuce" FT /isolate="Ls302" FT /mol_type="viral cRNA" FT /country="Netherlands" FT /collection_date="1999" FT /note="acronym: LBVaV" FT /db_xref="taxon:1985698" FT CDS 336..6458 FT /codon_start=1 FT /product="L-protein" FT /db_xref="GOA:H6UYY9" FT /db_xref="InterPro:IPR014023" FT /db_xref="InterPro:IPR025786" FT /db_xref="InterPro:IPR026890" FT /db_xref="InterPro:IPR039736" FT /db_xref="UniProtKB/TrEMBL:H6UYY9" FT /protein_id="AFA36170.1" FT /translation="MSLASRMTSVGGADNYGESDYGWDETVLGDMHLNSAINLDLFKEF FT LHIDSPVYKVKENHRLTEELRELQSLARKSAKIEIGFQRLFARMFPRDGNLIPMDSTMT FT RMIMKIIRDSGTKYKLGIPLLGISEEMIKEGAMVPSNLVYSFNCFLNIIYGRSEWIRSE FT GIAIRFKMYEHGRFIRRDLTISGKEYNFIVGKEVVEIRASGRKERFIADYNSLLLLLDV FT AGQRICAHLCSQLGEISGVPGSLSRYHLETLCTAGDRMIERCGNKAYEVLGMYEALCVG FT RLLENNPDGITDHTQFSANCEEELQELITGSVEPAFMKSQVDLIKATLEKMKNQDISNA FT FCLYRVWGHPTVDIYEGMKKVHTIGTKVKVIPPNLGTIMVCQFRKMFMSTFFKKHHRYP FT PITGTPGEYLERCLKDNVAIRIEHLAYNLRDFEFIRIGETYSVPDTFDMCHVLNDKAVS FT PDMSELLESIKNGKGTSCGAKRRGILRWMEGDSLNCKSFLSDIDEKGLSEEDLLIGMYE FT KEREIKVAARMYSLMTERMRYYFVLTEGLIADYILPHFPEITMKDSLNVLLKKMWESGG FT QRSIGSMDVNINIDFSKWNTNMREGPTSDTFREMDGIFGFKRLITRTHEIFNASLVYSA FT SGKYLPTVENGRILDDPPMCYRGHLGGFEGLRQKGWTVATVCLLAYLSEQNKIQMKLMG FT QGDNQIIRLRMPTSYWDSLRLTEEMKKKEARILSDKFVHEMDIIFTGVGLPIKVRETWK FT STRLFMYGKVMLLDGRQLPQWYKKTLRSYALSNEGTLTISGVIGTIATNMCAAGGGSEV FT PCVMYLFFLLLAEWSLEFMFRYHPFTRVGIKDGSSMEFRLNEKGGCVHKQTQKTNNLWL FT KSLLVLVPTAVGGSVTIPLTGFIMRGFPDKASEGYAWLKFLGSSKSPIQGFLKNFYTFL FT PNDTVEADMLVQSPFSLNHKRPPTPGLQTKENIREWLLSTPRFQQNRFIRSMQVLLSGF FT DKKSVCRELLTERMNPLISHEVYETFGHVYCEGIVARVENTRTIRTLHLSREDRKPIVA FT KLMTDEMAYIAYMWWRGNTKGEVVEECATKQARKGRNVGWKREIMGITTPHPLEVLFQS FT VCRPGDQCQRSDDYITSKLVDDGKFPPFLGSKIKNKVYSLQDEEARREPLIKTGARLAR FT QFNWIGMGENMRGLVLKNVGSICDVSVFDKFVDDDPSDNLYTGSLMHRFTPSSVSEGCF FT INYAPQVGHKVFMSSDTLPSLSRGQTNYTFHFQAMYCFLQYSISKSGNEGSYHHHIMCQ FT DCVVPVEDEFDDIPSETPSIVKAQEEQYVSIIRTTLGYIHTKPRSAMVLEDKSPIGRYI FT EDVEGHEKELYSGVVELLCWKSALEILGRTRDTHATVGTEDLQGWPRIYAYKVSRRHII FT GRVTSFLLYILAVQIGELPLPYSMERVSRRAIDVVSRVGLEGFSAVASLCLGRDIPMVN FT DVVTIVDGFAYPETVSVCLRSIKASILMTIGKVIRVDSFMSRRSVYPTESMTSDDFLRI FT LGFKAVIFYGCTKIHEQCQLKGLDQVTYAEMMCHHRCLEKLLSSNLLTHMTMDRAMKYL FT PIKITKILPQISSTRPNTIAVTREVETENREFSDTFPIDERVTYPEMDLKTHQMIQYPT FT SSIYKWSDILLGIEHYDHVIVMGDGTGGTSMVAAHMFPNSIIYPMALLESKNLIPQDME FT SLAPPMSRKLTNVDSSLLIDLPDDIRKPAFRTRMLERVLLMRGNILIISDIEGTGTLFK FT DIVSTCLYMPTSTDVLMKTHLADLCGSYYMMKGAGRIRLRGSRLANLRYGEVFVSFRVT FT GGNIRPNRRGLGNCIQEVMIGLMNTQVETATGMLSQIESMFPLAADMSMNIAMMKMASW FT GGSFSRKVLGEDGLKLMGYVYQYINTHYHFASSSYRPGDNRTVTPGRKEDLTKLLCSIM FT LGVYGEDTETVEEVSKYTLIGSKKGVPGKSYFKVLMWKTGTKRTLEHDEYMVGRAIRNY FT RTRILEAKKLDGPIGLPFHSGSLRKIATWGYKIPISASGGWIDNHLQI" XX SQ Sequence 6791 BP; 2086 A; 1398 C; 1699 G; 1608 T; 0 other; gagacgcata ttcatactac aaatccaaca aatcaaaacc ttttaacgcc cgataaacag 60 cctttcgtcg aggcattcag cgaccctatc gtttctgttt tgatgaatgt tgtgtatttt 120 atgttttccg tgtttccatc atccgttttt ttccagagtt ccctatctcc aggttcttga 180 gacccttact tctcttcttt cttctattac tccctatccc cgtaacccta aggattctga 240 accgttcagg ctctgagagt aggaaatacg taaaaaaacg agaacaaaat tcgcttttat 300 atattgtaat atttagtaag aactaagaca acgaaatgtc tctagcaagc agaatgacaa 360 gtgttggagg agctgacaat tatggagaat cggattacgg atgggatgag actgttttag 420 gggatatgca tcttaacagc gcgatcaact tggatctctt caaggagttc ctccacatag 480 attcgcccgt ttacaaggtc aaggagaatc acagattgac agaagagttg agagaacttc 540 aatccctggc cagaaagagc gcaaagatag agatcgggtt ccagagactg tttgctcgca 600 tgttccccag agatggaaat ctcatcccca tggatagcac gatgaccagg atgataatga 660 agataataag ggactcaggt accaaataca agctgggaat cccactgctt ggaatctcgg 720 aagaaatgat caaagaaggg gccatggttc ccagcaatct cgtatacagc ttcaactgtt 780 ttctcaacat catatacggg aggtcagaat ggataaggtc agaaggtatt gccattcgtt 840 tcaagatgta tgagcatgga cgattcataa ggagagactt gacgatcagc ggaaaagagt 900 acaacttcat tgttgggaag gaggtggtcg agataagagc atcggggaga aaggagagat 960 tcatagcaga ttacaactct ctcttactgc tgttggatgt tgcaggacaa cgaatatgtg 1020 cacatctctg ctctcagctc ggagaaatat ccggtgttcc tggttcactc tctcggtacc 1080 atctggagac tctatgtacg gcaggggata gaatgataga gagatgcggt aacaaggcat 1140 acgaggttct cggaatgtat gaggctctat gcgtgggaag gctcttagaa aataacccag 1200 acggaataac agaccataca caattctctg cgaactgtga agaagaacta caggaactga 1260 ttaccgggtc tgtcgaacca gccttcatga agagtcaggt ggatttgatc aaagctacac 1320 tggaaaagat gaaaaatcag gatatatcga acgctttctg tctatacaga gtctggggac 1380 atccaacggt ggacatatat gaggggatga aaaaagtgca tactataggg acaaaagtga 1440 aggtgattcc tccgaatcta ggaacaatta tggtatgcca attcaggaag atgttcatgt 1500 caaccttctt caagaagcat cataggtacc cacccatcac gggaacccca ggagaatatc 1560 tggagagatg tctaaaggac aatgtcgcga tcaggataga acacctcgca tacaatctaa 1620 gagacttcga gttcatcaga ataggggaga catacagtgt tccagacaca ttcgatatgt 1680 gtcatgtact caatgacaaa gcagtcagtc ccgacatgtc agagctctta gagtcaataa 1740 agaacgggaa aggaactagt tgtggagcaa aaagaagggg aatattgaga tggatggagg 1800 gggacagtct gaactgcaaa tcatttctct cagacattga tgaaaaggga ctgagcgagg 1860 aggatcttct gataggaatg tacgagaaag agagagagat caaggttgcg gccagaatgt 1920 actctctgat gacagagagg atgagatact attttgtctt gactgagggg cttattgcgg 1980 actacatact gccccacttc cctgagatca caatgaagga cagcctgaac gtattgttaa 2040 agaagatgtg ggagtctgga ggacagagaa gcataggatc gatggatgtg aacataaaca 2100 tcgacttctc aaagtggaat acaaacatga gagaagggcc caccagtgac acattcagag 2160 agatggacgg gatatttggg ttcaagaggt tgataacaag aacacatgag atcttcaatg 2220 catctctggt ttattcagca tcagggaagt accttcctac agtcgagaat ggtagaatcc 2280 tagatgatcc tcccatgtgt tacagagggc acctcggagg attcgaggga ttgagacaga 2340 agggatggac ggtagcaact gtatgcttac tcgcatatct ctcagaacag aacaagatcc 2400 agatgaagtt gatgggacag ggtgacaatc agattatcag gctgaggatg ccaaccagct 2460 actgggatag cttacgactc acagaggaga tgaagaagaa ggaagccagg atcctatctg 2520 acaaattcgt gcatgagatg gacataatat tcacaggagt aggacttccg atcaaggtca 2580 gagagacatg gaaatcgaca agacttttca tgtacggaaa ggtaatgcta ttagatggac 2640 ggcagctccc tcaatggtat aagaaaactc tcagatcgta cgctctaagc aatgagggaa 2700 ccctgacaat tagtggagtg atcggaacca ttgctaccaa tatgtgtgcg gcaggaggag 2760 gaagtgaggt gccctgtgtt atgtatctct tcttcttgtt gttggcggaa tggtcactcg 2820 agttcatgtt caggtatcat ccgttcacaa gggttggaat caaggacggg agttcaatgg 2880 agtttcgact gaatgagaag ggaggctgtg ttcataagca gactcaaaag acaaacaatc 2940 tgtggctgaa gtccctctta gtcctagtgc ctactgccgt ggggggaagt gtgactattc 3000 ctctcaccgg attcataatg agaggatttc ctgacaaagc ctcagagggt tacgcatggc 3060 tgaaattctt agggtcatca aagtctccca tccagggctt cctgaagaac ttctatacct 3120 ttcttcccaa cgatacagta gaagccgaca tgctggtaca gtcccctttc tctctgaacc 3180 ataagaggcc tcccacaccc gggttacaga cgaaggaaaa cataagggaa tggctgctct 3240 cgacaccaag attccaacag aaccggttca ttagaagcat gcaggttctt ttatcagggt 3300 ttgacaagaa aagtgtttgc cgcgaacttt taacagagag aatgaacccg ctgatcagtc 3360 acgaggtcta tgagaccttt gggcacgttt actgtgaggg gatcgtggcc agggtagaga 3420 acactcgaac gatacgaaca cttcatctca gcagagagga tagaaaacca atcgtagcaa 3480 agctaatgac tgatgagatg gcatacatag catacatgtg gtggagaggg aacactaagg 3540 gtgaagttgt tgaggaatgt gccacaaagc aggctaggaa aggtagaaat gttggttgga 3600 agagagagat catggggatt accacacctc atcctctaga agtgctattc cagagtgtat 3660 gtagacctgg agaccaatgc caaagatcag atgactacat cacatcaaaa cttgtagacg 3720 acgggaagtt tcccccattc cttgggagca agatcaagaa caaggtgtac tcactgcaag 3780 acgaggaagc aagaagagaa ccattgatca agaccggggc tagattggcc agacagttca 3840 attggatcgg aatgggagag aatatgagag gattggtctt aaagaatgta gggtccatat 3900 gcgatgtgtc agtattcgac aagttcgttg atgatgatcc ctcagacaac ctatacactg 3960 ggtctctcat gcacaggttc accccctcct ctgtctctga gggctgcttt atcaactatg 4020 cacctcaagt cggtcataag gtcttcatgt cttcagatac gctcccctct ctctccagag 4080 gccagacaaa ctacacattc cattttcagg cgatgtactg ctttctccaa tacagcatat 4140 ccaaatcagg aaatgaagga tcataccatc atcatatcat gtgccaagac tgtgtagtcc 4200 ctgtcgaaga tgaatttgat gacatcccta gcgaaactcc aagcatagtg aaggcacaag 4260 aagagcaata cgtctcgata atcagaacaa cattagggta cattcatacg aagccaagga 4320 gtgcgatggt attggaggac aagagcccca taggaagata catcgaggat gtggaaggac 4380 acgagaagga gctatactca ggggttgtcg agttactgtg ctggaagtct gcattggaga 4440 tcttaggtag gacaagagac acgcatgcaa cagtcgggac agaagacctc caggggtggc 4500 ccagaatata cgcctataag gtctcaagaa ggcacatcat aggaagggta acctcattcc 4560 tcctgtacat cctggcagtg cagataggag agcttcctct tccttacagc atggagagag 4620 tgagccgacg agcgatagat gtagtctcac gagtcggtct tgagggattt tctgcagttg 4680 cctccctttg tctagggaga gatatcccaa tggtgaatga cgttgtaacc atcgtagatg 4740 ggtttgctta tccagagact gtgtccgtct gcctccgatc gatcaaggca tctatcctta 4800 tgaccatagg caaggtgatt agagtggata gtttcatgtc gagaaggagt gtctatccaa 4860 cagagtcaat gacctcagac gattttctga ggatcttggg attcaaggct gtcatcttct 4920 atgggtgcac aaaaattcat gagcagtgcc aactaaaagg actcgaccaa gtgacctacg 4980 cagaaatgat gtgtcatcat agatgtctgg agaaactcct atcatccaac ctcctcaccc 5040 acatgactat ggacagagct atgaagtatc tacccatcaa aatcaccaag attctccctc 5100 agatctcttc cacaagacct aacacaattg ccgtgactag agaagtggag actgagaacc 5160 gagagttctc cgacaccttt cccattgatg agcgagtgac atatccagaa atggatctca 5220 agacccatca gatgatccag tatcccacat caagcatata caaatggagt gacatccttc 5280 tcggaattga acactacgat catgtgatag tcatgggaga tggcactgga ggtacatcaa 5340 tggttgctgc gcacatgttc ccgaactcca tcatatatcc tatggcactc ctagagagta 5400 aaaatctgat ccctcaagac atggaatcac ttgcccctcc tatgtccagg aagcttacaa 5460 atgtagattc atctctcctg atcgatctcc ctgatgacat cagaaagccc gcattcagaa 5520 ctaggatgct agagagagta ttgctcatgc gaggaaacat tctcataatc tctgacattg 5580 agggaactgg aacattgttc aaggacatcg tatccacatg tctatacatg cctacatcaa 5640 cggatgttct catgaaaaca catttagcag acctctgtgg atcatattac atgatgaagg 5700 gtgcaggaag gattagactc agaggtagtc ggttggcaaa tctcagatat ggagaagtat 5760 tcgtctcatt cagagtcact ggagggaaca tcagaccgaa cagaagaggg ctggggaact 5820 gcattcagga ggtgatgatc gggctcatga atacccaggt agagacagca actggaatgc 5880 tctcgcagat agagtccatg ttccccttag ctgctgatat gagcatgaac atagctatga 5940 tgaagatggc atcatgggga ggatcattct cgaggaaggt tcttggagag gatgggctga 6000 agctgatggg atatgtctac caatacatca atacacacta ccacttcgcc tcatcctctt 6060 acaggcctgg agacaataga acagtaacac cagggagaaa agaggatctg accaagctcc 6120 tgtgctccat tatgttgggg gtttatggag aagatacaga gactgttgag gaagtgtcga 6180 agtacacgtt gatcgggagc aagaaaggag taccaggaaa gagttacttc aaggttctga 6240 tgtggaaaac ggggaccaaa agaaccctgg aacacgatga gtacatggtt gggagagcaa 6300 taaggaacta ccgcaccagg attctggagg caaagaaact ggatggaccg ataggattgc 6360 cattccatag tggatcccta agaaagattg ccacctgggg atacaagatc ccaatatctg 6420 caagcggtgg atggatagac aatcacctac agatctaagg acccttggag gatgaatgag 6480 attgtgagta gggagtgcga acgtatgatc agactttgaa taagtcctga atattagaaa 6540 aaacgaaccc aaataactca gtgaccgttc attccagaac agactggtgt attaagatgt 6600 ctagacaacg tccaaagtcg gaagtagggg aaatatccga gtgtgtgaac attggaaaaa 6660 atcacaaaca taaacccccg ggaataatga aacgttggag tctcccagcc cgctaaagca 6720 agttgagttc taacaaagcc gtgttagtcg gggtcttgat ttttatgatt ttgttgtgct 6780 gtgtttgaga c 6791 //