ID   JN703796; SV 1; linear; genomic RNA; STD; VRL; 1378 BP.
XX
AC   JN703796;
XX
DT   19-FEB-2012 (Rel. 111, Created)
DT   19-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Potato virus Y isolate Pep1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1378
RA   Cheng Y.H., Chen C.C., Chang C.A.;
RT   "Identification and molecular characterization of an isolate of Potato
RT   virus Y from sweet pepper in Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1378
RA   Cheng Y.H., Chen C.C., Chang C.A.;
RT   ;
RL   Submitted (20-SEP-2011) to the INSDC.
RL   Plant Pathology Division, Agricultural Research Institute, No. 189,
RL   Zhongzheng Rd., Wufong, Taichung, Taiwan 41301, Taiwan
XX
DR   MD5; 61de6d3285da40c4c1e6f1378d4c8c82.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1378
FT                   /organism="Potato virus Y"
FT                   /host="Capsicum annuum L."
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="Pep1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /isolation_source="leaves"
FT                   /collected_by="Y. H. Cheng"
FT                   /collection_date="08-Sep-2010"
FT                   /identified_by="Y. H. Cheng"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..1050
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:H6UX04"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H6UX04"
FT                   /protein_id="AFA43811.1"
FT                   /translation="MIEAWGYHELTHQIRRFYSWLLQQQPFAAIAQEGKAPYIASMALR
FT                   KLYMDRAVDAEELRAFTEMMVALDDEFECDSFEVHHQANDTIDAGENNKKDAKPAQGSI
FT                   QPSSTKGKDKDVNAGTSGTHTVPRIKAITSKMRMPKSKGAAALNLEHLLEYAPQQIDIS
FT                   NTRATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGNEQ
FT                   VEYPLKPIVENAKPTLGQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVSLARYA
FT                   FDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSM
FT                   HTLLGVRNM"
FT   mat_peptide     247..1047
FT                   /product="coat protein"
XX
SQ   Sequence 1378 BP; 426 A; 250 C; 342 G; 360 T; 0 other;
     atgatagagg cgtggggtta tcatgaacta acacaccaaa tcaggagatt ttactcatgg        60
     ttattgcaac agcaaccttt tgcagcgata gcgcaggaag ggaaggctcc ttatatagca       120
     agcatggcgt tgaggaaact gtatatggat agggctgtgg atgcggaaga gctaagagcc       180
     ttcactgaaa tgatggttgc attagacgat gagtttgagt gtgactcttt tgaagtacac       240
     catcaagcaa atgacacaat tgatgctgga gagaataata agaaagatgc gaaaccagca       300
     cagggtagca tccagccaag ttctactaaa gggaaggata aggacgtgaa tgccggcaca       360
     tctggaacac atactgtacc aagaataaag gctattacgt caaaaatgag aatgcccaaa       420
     agcaagggag cagccgcact aaatttagaa cacttgcttg agtacgctcc acaacaaatt       480
     gatatttcaa atactcgagc aactcaatca cagtttgata cgtggtatga ggcagtgcgg       540
     atggcatacg acataggaga aactgagatg ccaactgtga tgaatgggct tatggtttgg       600
     tgcattgaaa atggaacctc gccaaatatc aacggagttt gggttatgat ggatgggaat       660
     gaacaagttg agtacccgct gaaaccaatc gttgagaatg caaaaccaac ccttgggcaa       720
     atcatggcac atttctcaga tgttgcagaa gcgtatatag aaatgcgcaa caaaaaggaa       780
     ccatacatgc cacgatatgg tttaattcga aacctgcggg atgtgagttt agcacgttat       840
     gcctttgact tttatgaagt cacatcacga acaccagtga gggctaggga agcgcacatt       900
     caaatgaagg ccgcagcatt gaaatcagcc caacctcgac ttttcgggtt ggacggtggc       960
     atcagtacac aagaggagaa cacagagagg cacaccaccg aggatgtctc tccaagtatg      1020
     catactctac ttggagtcag gaacatgtga tgtagtgtct ctccggacga tatataagta      1080
     tttacatatg cagtaagtat tttggctttt cctgtactac ttttatcata attaataatc      1140
     agtttgaata ttattaatag atagaggtgg cagggtgatt tcgtcattgt ggtgactcta      1200
     tcttttaatt ccgcattatt aagttttaga taaaagtgcc gggttgtcgt tgttgtggat      1260
     gattcatcga ttaggtgatg ttgcgattct gtcgtagcag tgactatgtc tggatctatc      1320
     cgcttgggtg atgttgtgat ttcgtcatag cagtgactgt aaacttcaat caggagac        1378
//