ID JN703795; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC JN703795; XX DT 19-FEB-2012 (Rel. 111, Created) DT 19-FEB-2012 (Rel. 111, Last updated, Version 1) XX DE Papaya leaf curl virus isolate Pt9, complete genome. XX KW . XX OS Papaya leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2736 RA Cheng Y.-H., Lin H.-C., Chang C.-A., Lin F.-C.; RT "Whitefly-transmitted geminiviruses in ornamental plants in Taiwan"; RL Unpublished. XX RN [2] RP 1-2736 RA Cheng Y.-H., Lin H.-C., Chang C.-A., Lin F.-C.; RT ; RL Submitted (19-SEP-2011) to the INSDC. RL Plant Pathology Division, Agricultural Research Institute, No. 189, RL Zhongzheng Rd., Wufong, Taichung, Taiwan 41301, Taiwan XX DR MD5; 158290df144f0ad0c4781b29d517fc7b. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Papaya leaf curl virus" FT /host="Euphorbia pulcherrima" FT /isolate="Pt9" FT /mol_type="genomic DNA" FT /country="Taiwan" FT /collected_by="Y. H. Cheng" FT /collection_date="25-Oct-2005" FT /identified_by="Y. H. Cheng" FT /db_xref="taxon:53260" FT gene 115..465 FT /gene="AV2" FT CDS 115..465 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:H6UWZ7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6UWZ7" FT /protein_id="AFA43804.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVESTYSPDTLGYDLIRDL FT ISVLRARNYVEATSRYCHFHTRFEGTPPSQLRQPLQQPCCCPYCPRHKQKENMGQPAHV FT PEAPNLQNVQKP" FT gene complement(236..586) FT /gene="AC5" FT CDS complement(236..586) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6UWZ8" FT /protein_id="AFA43810.1" FT /translation="MSKPITTSDIGDTKDLTYMGYIMTLFIRLDLTWAFTPTRDIRASV FT HSVNSGLPVHGPVDPCSPFVCDEDSRGSSTAAVRAVEVETAAYLRSGCGNDNICWSLRH FT NSLHVRQKLNLE" FT gene 275..1048 FT /gene="AV1" FT CDS 275..1048 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:H6UWZ9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H6UWZ9" FT /protein_id="AFA43805.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSSRAAAPTVLVTNKRRTW FT VNRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRHDIAHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQALVRKFMKINNHVTYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSIQN" FT gene complement(1045..1449) FT /gene="AC3" FT CDS complement(1045..1449) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:H6UX00" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H6UX00" FT /protein_id="AFA43808.1" FT /translation="MDSRTGEPITAAQAENGAYIWTVPNPLYFKIMHHHNRPFNTNHDV FT IHVQIRFNHNLRKALGIHQCFLDFRIWTHLHPQTSRFLRVFSSQCIKYLDNLGIVSINN FT VIRAVTHVLYDVLVGTIDVQETSIIKFNLY" FT gene complement(1190..1597) FT /gene="AC2" FT CDS complement(1190..1597) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:H6UX01" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H6UX01" FT /protein_id="AFA43807.1" FT /translation="MQNSSPSRAHSTQVPIKVQHRIAKKKSIRRRRIDLNCGCSYYISI FT NCHNDGFTHRGTHHCSSSREWRIYLDGTKSPLFQDNASPQQTLQHEPRRNTCTNPIQPQ FT PEESIGDTSVFSGLPDLDSFTSSDLAFLKSL" FT gene complement(1497..2579) FT /gene="AC1" FT CDS complement(1497..2579) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:H6UX02" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H6UX02" FT /protein_id="AFA43806.1" FT /translation="MAPPEIPIMPKLFPNLSTLFAYKRGNPDQIKALDTATNKKFIKVC FT RELHEDGSPHLHVLIQFEGKFRCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLDK FT DGDTLEWGEFQIDGRSARGGQQSANDAYAQALNAGSKSEALNVIKELAPKDFVLQFHNL FT NANLDRIFAPPLEVFLSPFSSSFFDQVPEELEEWAAENVVSAAARPWRPKSIVIEGESR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAALKNWTLKNAEFFTLTGPLYS FT GTNQSPAPHREEEINSQEEN" FT gene complement(2138..2428) FT /gene="AC4" FT CDS complement(2138..2428) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6UX03" FT /protein_id="AFA43809.1" FT /translation="MGALISTCLSNSRGNSDARINDSSIWYPQQGQHISIRTFRELNRA FT PTSSPIWTKTETPSNGESFRSTVDLQEEDNNQPTTLTPRRLTQEVSQRLLM" XX SQ Sequence 2736 BP; 700 A; 577 C; 624 G; 835 T; 0 other; accggatggc cgctttttta gtggtgggcc ctcgaccaat agaattgcgc gctcatcgct 60 tagttatcgc gtggtcccct atttaatact tcctcgcgaa gttttgcttc aaaaatgtgg 120 gatccacttc tgaacgagtt ccctgatacc gtacatggtt tcaggtgtat gctcgctgta 180 aaatacttgc agttggtaga atctacgtat tcaccagata cactcggata cgatcttatt 240 cgagatttaa tttctgtctt acgtgcaagg aattatgtcg aagcgaccag cagatattgt 300 catttccaca cccgcttcga aggtacgccg ccgtctcaac ttcgacagcc cttacagcag 360 ccgtgctgct gcccctactg tcctcgtcac aaacaaaagg agaacatggg tcaaccggcc 420 catgtaccgg aagccccgaa tttacagaat gtacagaagc cctgatgtcc ctcgtgggtg 480 tgaaggccca tgtaaggtcc aatcttatga acagcgtcat gatatagccc atgtaggtaa 540 ggtcctttgt gtctccgatg tcactcgtgg taatgggctt actcatcgtg tgggcaagag 600 gttttgtgtt aagtccgttt atgtattggg taagatctgg atggatgaaa acatcaagac 660 taagaatcac actaataccg tcatgttctt cttagtgcgt gatagaagac cgtttggtac 720 tccccaggat tttggtcagg tgtttaacat gtatgataac gagcccagta ccgctactgt 780 gaagaatgac aacagagata ggtttcaagt tcttcgccgt tttcaagcta cggtgactgg 840 tggtcaatat gcaagcaagg agcaggctct agttaggaag tttatgaaga ttaacaacca 900 tgtcacttac aatcatcagg aagctgcgaa atatgaaaat catactgaga atgctttgtt 960 gttgtatatg gcatgtaccc atgcctcgaa tccagtgtat gctactttga aaattcggat 1020 ctatttctat gattcgatac aaaattaata aagattgaat tttattatac ttgtttcttg 1080 tacatcaatt gttccgacta atacatcgta caatacatga gtaacagccc taattacatt 1140 atttattgat acaataccca aattatctaa atacttaata cattgactgc taaagactct 1200 taagaaacgc gaggtctgag gatgtaaatg agtccagatc cggaagtcca gaaaacactg 1260 atgtatcccc aatgctttcc tcaggttgtg gttgaatcgg atttgtacat gtattacgtc 1320 gtggttcgtg ttgaagggtc tgttgtggtg atgcattatc ttgaaataaa ggggatttgg 1380 taccgtccaa atatatgcgc cattctcggc ttgagctgca gtgatgggtt cccctgtgcg 1440 tgaatccatc gttgtggcag ttgatggata tgtaatagct gcagccgcaa ttgagatcaa 1500 ttctcctcct gcgaattgat ttcttcttcg cgatgcggtg ctggactttg attggtacct 1560 gagtagagtg ggcccgtgag ggtgaagaat tctgcattct tgagagtcca attctttagt 1620 gcagcattct tttcctcgtc taggtactct ttatagctgg agttcggacc aggattgcag 1680 aggaagatag tgggaattcc tcctttaatt tgaattggct tcccgtactt cgtgttgctt 1740 tgccagtccc tttgggcccc catgaactct ttaaaatgct ttaggtagtg ggggtcgacg 1800 tcatcgatga cgttgtacca agcatcatta ctgtagacct ttgggctcag gtccaggtgt 1860 ccacataaat aattgtgtgg gcctaaagac ctggcccaca ttgtcttccc tgtcctactc 1920 tcgccctcta tgacaatact tttgggtctc catggccgcg cagcggcact aacaacattc 1980 tcagccgccc actcttcaag ttcttctgga acttgatcga aaaaagaaga agaaaaagga 2040 gaaagaaaaa cctccaaagg aggagcaaaa atcctatcta aattggcatt taaattatga 2100 aattgtaaaa caaaatcttt gggcgctaat tctttgatta cattaagagc ctctgactta 2160 cttcctgcgt taagcgcctg ggcgtaagcg tcgttggctg attgttgtcc tcctcttgca 2220 gatctaccgt cgatctgaaa ctctccccat tcgagggtgt ctccgtcttt gtccaaatag 2280 gacttgacgt cggagctcga tttagctccc tgaatgttcg gatggaaatg tgctgacctt 2340 gttggggata ccaaatcgaa gaatcgttga ttcgtgcatc tgaatttccc ctcgaattgg 2400 ataagcacgt ggagatgagg gctcccatct tcgtgtagtt ctctacagac cttgatgaac 2460 ttcttgttag ttgcggtgtc tagggctttt atttggtcag ggtttcctct tttgtaagcg 2520 aacagtgtgg ataagttagg aaataatttt ggcattattg gaatttctgg tggtgccatt 2580 tgacttggtc aatgggtacc caatgagagg atttcataat gctctgggta tcggtacatt 2640 ggtaccctta tatactcggt tacctaatgg cattatcgta attctcaaaa taaaattcaa 2700 atttcgaatt ggtaaagcgg ccatccgtat aatatt 2736 //