ID   JN703794; SV 1; circular; genomic DNA; STD; VRL; 2734 BP.
XX
AC   JN703794;
XX
DT   19-FEB-2012 (Rel. 111, Created)
DT   19-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Ageratum yellow vein virus isolate Lis 1 segment A, complete sequence.
XX
KW   .
XX
OS   Ageratum yellow vein virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2734
RA   Cheng Y.-H., Lin H.-C., Chang C.-A., Lin F.-C.;
RT   "Whitefly-transmitted geminiviruses in ornamental plants in Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-2734
RA   Cheng Y.-H., Lin H.-C., Chang C.-A., Lin F.-C.;
RT   ;
RL   Submitted (19-SEP-2011) to the INSDC.
RL   Plant Pathology Division, Agricultural Research Institute, No. 189,
RL   Zhongzheng Rd., Wufong, Taichung, Taiwan 41301, Taiwan
XX
DR   MD5; d0d20bad93f13130b36c35bc6a414f37.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2734
FT                   /organism="Ageratum yellow vein virus"
FT                   /segment="A"
FT                   /host="lisianthus"
FT                   /isolate="Lis 1"
FT                   /mol_type="genomic DNA"
FT                   /country="Taiwan"
FT                   /collected_by="Y. H. Cheng"
FT                   /collection_date="10-May-2010"
FT                   /identified_by="Y. H. Cheng"
FT                   /db_xref="taxon:44560"
FT   gene            134..484
FT                   /gene="AV2"
FT   CDS             134..484
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2"
FT                   /db_xref="GOA:Q65315"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q65315"
FT                   /protein_id="AFA43797.1"
FT                   /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEQTYSPDTIGHDLIRDL
FT                   ISVIRARNYVEASRRYCHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHV
FT                   PQAQTVQNVQNP"
FT   gene            complement(255..551)
FT                   /gene="AC5"
FT   CDS             complement(255..551)
FT                   /codon_start=1
FT                   /gene="AC5"
FT                   /product="AC5"
FT                   /db_xref="InterPro:IPR013671"
FT                   /db_xref="UniProtKB/TrEMBL:H6UWZ1"
FT                   /protein_id="AFA43803.1"
FT                   /translation="MGYVVPLFIRLYLTWTFTTFGHIRGSVHSVQSGLAVHGPVGPCPS
FT                   SVGDEDSGGSSTAHHGGVEVQTATYLRGGSGNDNICGTLRHNCEHELLKLNRV"
FT   gene            294..1067
FT                   /gene="AV1"
FT   CDS             294..1067
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="AV1"
FT                   /db_xref="GOA:A5A4R5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:A5A4R5"
FT                   /protein_id="AFA43798.1"
FT                   /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRRRTW
FT                   TNRPMYRKPRLYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTH
FT                   RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTAMDFGQVFNMYDNE
FT                   PSTATIKNDLRDRYQVLRKFSSTVTGGQYASKEQALVKKFMKINNYVVYNHQEAAKYDN
FT                   HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT   gene            complement(1064..1468)
FT                   /gene="AC3"
FT   CDS             complement(1064..1468)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="AC3"
FT                   /db_xref="GOA:Q9DXI2"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DXI2"
FT                   /protein_id="AFA43801.1"
FT                   /translation="MDFRTGELLTATQCESGVYTWTIKNPPYFKIIKHHERPFNTNHDI
FT                   ITIRIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLNNLGVISINN
FT                   VIRACDHVLWDVLENTEYVTNSHIIKFNLY"
FT   gene            complement(1209..1616)
FT                   /gene="AC2"
FT   CDS             complement(1209..1616)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="AC2"
FT                   /db_xref="GOA:Q9DXI1"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DXI1"
FT                   /protein_id="AFA43800.1"
FT                   /translation="MRNSSPSTTHCTQVPIKVQHRIAKRRPVRRRRVDLTCGCSYYFGI
FT                   DCANHGFSHRGITHCNSMREWRIYLDNQKSPIFQDNQAPREAIQHQPRHHNDQNTVQSQ
FT                   PEESVGNTPVFSDLPDLDSLTTSDLAFLKSI"
FT   gene            complement(1522..2604)
FT                   /gene="AC1"
FT   CDS             complement(1522..2604)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="AC1"
FT                   /db_xref="GOA:Q9DXI0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DXI0"
FT                   /protein_id="AFA43799.1"
FT                   /translation="MPRSSSFQVKAKNIFLTYPKCPIPKEEALELIKNIQCPSDKLFIR
FT                   VAQEKHSDGTLHLHALIQFKGKAQFRNSRHFDITHPNTSTQFHPNFQGAKSSSDVKSYI
FT                   EKDGDYVDWGVFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPKEYIFQFH
FT                   NLNTNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGE
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKEWAIKNAEFVTLNNPL
FT                   YSGTNQSAAQNSEEEASSQA"
FT   gene            complement(2190..2447)
FT                   /gene="AC4"
FT   CDS             complement(2190..2447)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:H6UWZ6"
FT                   /protein_id="AFA43802.1"
FT                   /translation="MGLCISTRSYNSKVKPNSGIVDTSTLHTPTPPHNSIQTSRELSPV
FT                   PMSSPTSRRTVITSTGVYFRSTEDLLEEVNRRLTMQLQKR"
XX
SQ   Sequence 2734 BP; 738 A; 555 C; 564 G; 877 T; 0 other;
     accggatggc cgcgattttt tttttaaagt ggtccctacc actaacaaaa atcccccact        60
     cagaacgctc cctcaaagtt aaattattaa gtggtcccct atttatactt attctccaag       120
     tattatttta aacatgtggg atcctctttt gaacgagttt cctgaaactg ttcacggttt       180
     taggtgtatg cttgccgtaa aatatcttca attagttgaa cagacatact ctcctgatac       240
     gattggtcac gatcttatac gcgatttaat ttcagtaatt cgtgctcgca attatgtcga       300
     agcgtcccgc agatattgtc atttccactc ccgcctcgaa ggtacgtcgc cgtctgaact       360
     tcgacacccc cgtgatgagc cgtgctgctg cccccactgt cctcgtcacc aacagaagaa       420
     ggacatggac caacaggccc atgtaccgca agcccagact gtacagaatg tacagaaccc       480
     ctgatgtgcc caaaggttgt gaaggtccat gtaaggtaca atcgtatgaa cagaggcacg       540
     acatatccca tgttggtaag gtattatgtg ttagtgatgt cacccgtggt aatgggctta       600
     cacatcgtgt tggtaagaga ttctgtgtga agtctgttta tgtattaggt aaaatatgga       660
     tggatgaaaa tattaaaact aagaaccata cgaacactgt gatgtttttt cttgttcgtg       720
     acagaaggcc ctatggtact gctatggatt ttggtcaggt gtttaacatg tatgataatg       780
     agcccagtac tgctactatc aagaatgatc ttcgagatcg ttatcaagtt ttaaggaaat       840
     tcagttcaac agtcacaggg ggtcaatatg cttctaagga acaggcgttg gtgaagaaat       900
     ttatgaagat taataattat gtagtttata atcatcaaga agctgctaag tatgacaatc       960
     atactgaaaa tgccttgtta ttgtatatgg cttgtactca tgccagtaat ccagtgtatg      1020
     ctactttgaa gatcagaatc tatttctatg attctgttca gaattaataa agattgaatt      1080
     ttattatatg agaatttgtt acatattctg tattttccaa tacatcccat aatacatgat      1140
     cacatgctct aattacattg ttaatactaa ttacacccaa attatttaaa tatttcatac      1200
     attgaaccct aaatactctt aagaaacgcc aagtctgagg ttgtaagcga gtccagatct      1260
     ggaagatcag aaaacactgg tgtattccca acgctttcct caggttgtga ttgaactgta      1320
     ttctgatcgt tatgatgtcg tggttggtgt tgaatggcct ctcgtggtgc ttgattatct      1380
     tgaaatatgg gggatttttg attgtccagg tatatacgcc actctcgcat tgagttgcag      1440
     tgagtaattc ccctgtgcga aaatccatga tttgcacaat ctatgccgaa gtagtatgaa      1500
     cacccgcacg ttagatcaac tctacgcctg cgaactggcc tcctcttcgc tattctgtgc      1560
     tgcactttga ttggtacctg agtacaatgg gttgttgagg gtgacgaatt ccgcattctt      1620
     tatagcccac tcttttaatg ctgaattctt ttcttcgtcc aagtactctt tgtatgatga      1680
     tgttggtcct ggattgcaaa ggaagatagt tgggattcca cctttaattt gaattggttt      1740
     cccgtacttg gtgttgcttt gccagtccct ttgggccccc atgaattctt taaagtgctt      1800
     tagatagtgg gggtctacgt catcaatgac gttataccaa gcatcattac tgtacacctt      1860
     tggactcaga tctagatgac cgcacagata attatgtggt cccagtgatc tggcccacat      1920
     tgttttacca gtacgactct ctccctctat gacaatactt ttgggtctcc aaggccgcgc      1980
     agcggcacca ctcacatttt cagaaaccca ctcctcaagt tcttctggaa cttgatcaaa      2040
     tgaagaagat aaaaaaggac aaacaaatac ctctaaagga ggtgcaaaaa tcctatctaa      2100
     attagtattt aaattatgaa attgaaaaat atattctttt ggaagttttt ccctaattat      2160
     tgccattgct gcctctttcg aacctgcgtt taacgcttct gcagctgcat cgttagccgt      2220
     ctgttgacct cctctagcag atcttccgtc gatctgaaat acaccccagt cgacgtaatc      2280
     accgtccttc tcgatgtagg acttgacatc ggaactggac ttagctccct ggaagtttgg      2340
     atggaattgt gtggaggtgt tggggtgtgt aatgtcgaag tgtcgactat tcctgaattg      2400
     ggctttacct ttgaattgta tgagcgcgtg gagatgcaga gtcccatctg agtgtttttc      2460
     ttgtgcaact ctgataaata atttatcaga agggcactgt atatttttaa taagctctaa      2520
     ggcttcttct ttgggaattg ggcatttcgg ataagtgagg aagatatttt tggcttttac      2580
     ttgaaatgaa cttgaacgag gcattttgac taagtcaatt gggtgctctc aaacttctct      2640
     ggaatggggt gctttgggtg cttatttata cggagccccc aaaagaaatt caaactttaa      2700
     tttgaaatcc acaagcggcc atccgtataa tatt                                  2734
//