ID   JN692495; SV 1; linear; genomic RNA; STD; VRL; 2219 BP.
XX
AC   JN692495;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   13-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Gerbera segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2219
RA   Raj S.K., Gautam K.K., Kaur C., Snehi S.K.;
RT   "Molecular identification of Cucumber mosaic virus associated with mosaic
RT   disease of Gerbera in India";
RL   Unpublished.
XX
RN   [2]
RP   1-2219
RA   Raj S.K., Gautam K.K., Kaur C., Snehi S.K.;
RT   ;
RL   Submitted (16-SEP-2011) to the INSDC.
RL   Plant Molecular Virology, CSIR-National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U. P. 226001, India
XX
DR   MD5; bdbf08fc91673d4fad488ee8eb2c58d4.
DR   EuropePMC; PMC4188193; 25674612.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2219
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Gerbera jamesonii"
FT                   /lab_host="Nicotiana tabacum cv. White Burley"
FT                   /isolate="Gerbera"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collected_by="K. K. Gautam"
FT                   /collection_date="22-Dec-2010"
FT                   /db_xref="taxon:12305"
FT   gene            123..962
FT                   /gene="3a"
FT   CDS             123..962
FT                   /codon_start=1
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:F2YWY4"
FT                   /protein_id="AFA26418.1"
FT                   /translation="MAFQSTSRTLTQQSSAATSDDLQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHELPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEHTKPSAVARLLK
FT                   SQLNNIESSQYVLTDSKINQNARSESEDLNVESPPVAIGSSSASRSETFRPQVVNGL"
FT   gene            1261..1917
FT                   /gene="3b"
FT   CDS             1261..1917
FT                   /codon_start=1
FT                   /gene="3b"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F2YWY3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:F2YWY3"
FT                   /protein_id="AFA26419.1"
FT                   /translation="MDKFESPSAGSNRRRRPRRGSRSASSSADPTFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLRPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVSAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSVMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSAVLPV"
XX
SQ   Sequence 2219 BP; 513 A; 519 C; 530 G; 657 T; 0 other;
     gtaatcttac cactgtgtgt gtgtggtgtg tgtgtgtgtc gcgtcgtgtc gagtcgtgtt        60
     gtccgcacat ttgagtcgtg ctgtccgcac atttttcttt cagtgtgtta gattcccgag       120
     gcatggcttt ccaaagtacc agcaggactt taactcaaca gtcctcagcg gctacgtctg       180
     acgatcttca gaagatatta tttagccctg aagccattaa gaaaatggct gctgagtgtg       240
     acctaggccg gcatcattgg atgcgcgctg ataatgcgat atcagtccgg cccctcgttc       300
     ccgaagtaac ccatggtcgt attgtttcct tctttaagtc tggatatgat gtcggtgaat       360
     tgtgctctaa aggatacatg agcgttcctc aagtgttatg cgctgttact cgaacagttt       420
     ctactgacgc tgagggatct ttgagaattt acctggctga tctgggcgat aaggagttat       480
     ctcctataga tggtcaatgc gtttcattac ataaccatga gcttcccgct ttagtgtctt       540
     tccagccgac gtatgattgt cctatggaaa ctgttgggaa tcgtaagcgg tgttttgctg       600
     ttgtcatcga aagacatggt tatattgggt ataccggcac cacagcaagc gtgtgtagta       660
     attggcaagc acgattttct tctaagaata ataactacac tcatatcgct gctgggaaga       720
     ctctagtact gccattcaac agattagctg agcacacgaa accgtcagcc gtcgctcgcc       780
     tgttgaagtc gcaattgaac aacatagaat cttcgcaata cgttttaacg gattcgaaga       840
     tcaatcaaaa tgcgcgcagt gagtccgagg atttgaatgt tgaaagccct cccgtcgcaa       900
     tcgggagttc ctccgcgtcc cgctccgaaa cctttagacc gcaggtggtt aacggtcttt       960
     agtgttttct ttgcatatta gtatttatgt atgtgtgagt ctgtacataa tactatatct      1020
     atagtgccct gtgagagttg atacaataca caactgagac gctatgccgt gttgagaaaa      1080
     aaacatttgt ggttcaaaaa acccatatca tattttagag gttcaattcc tcttgctccg      1140
     tgatgggtcc ttttactttt cggggattct cctccacaaa atggtgtgcc gtctactttt      1200
     cttaaaagaa ttgtggtgtg tgttcctctt ttgtgttgta gaattgagtc gagtcgagtc      1260
     atggacaaat ttgaatcacc cagtgccggt agtaatcgtc gacgtcgtcc gcgtcgtggc      1320
     tcccgctccg cttcctcctc tgcggatcct acatttagag tcctgtcgca acagctttcg      1380
     cgacttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtgggt      1440
     agtgaacgtt gtaaacctgg atacacgttc acctcgatca ccctgaggcc accgaaaata      1500
     gacaaagggt cctattatgg caaaaggttg ttacttcctg attcagtcac tgagttcgat      1560
     aagaagcttg tttcgcgcat tcaaattcga gttaatccgt tgccgaaatt tgattctacc      1620
     gtgtgggtga cggtccgtaa agttcctgcc tcctcggacc tatccgtttc cgccatctct      1680
     gctatgttcg cggacggggc ctcaccggta ctggtttatc agtatgctgc atctggcgtt      1740
     caagccaaca acaaattgtt gtatgatctt tcagtgatgc gcgctgatat tggtgacatg      1800
     agaaagtacg ccgtactcgt gtattcaaaa gacgatgcgc tcgagacgga tgaactagta      1860
     cttcatgttg acatcgagca ccaacgcatc cccacatctg cggtgctccc agtttgaact      1920
     cgtgttttcc aggatcctcc ctccgtttct gtggcgggag ctgagttggt agtattgcta      1980
     taaactgacc tgaagtcact aaacgctttg cggtgaacgg gttgtccatc cagcttacgg      2040
     ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggtgcct      2100
     ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc cagcacaaga      2160
     tgctggtttt agagtacggg catccccccg cttcggtggg ggtctccaaa aggagacct       2219
//