ID JN680149; SV 1; circular; genomic DNA; STD; VRL; 2774 BP. XX AC JN680149; XX DT 30-OCT-2011 (Rel. 110, Created) DT 24-SEP-2014 (Rel. 122, Last updated, Version 2) XX DE Tomato yellow leaf curl virus isolate Goseong, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2774 RX DOI; 10.1007/s00705-014-2072-9. RX PUBMED; 24777825. RA Kil E.J., Byun H.S., Kim S., Kim J., Park J., Cho S., Yang D.C., Lee K.Y., RA Choi H.S., Kim J.K., Lee S.; RT "Sweet pepper confirmed as a reservoir host for tomato yellow leaf curl RT virus by both agro-inoculation and whitefly-mediated inoculation"; RL Arch. Virol. 159(9):2387-2395(2014). XX RN [2] RP 1-2774 RA Park J., Kil E.-J., Kim J., Kwak H.-R., Kim M.-K., Lee K.-Y., Choi H.-S., RA Lee S.; RT ; RL Submitted (14-SEP-2011) to the INSDC. RL Department of Genetic Engineering, Sungkyunkwan University, 300 RL Cheonchoen-dong, Jangan-gu, Suwon, Gyeonggi-do 440-746, Korea XX DR MD5; 5cec647724b122e646e0b36e0d5992e6. DR EuropePMC; PMC4705557; 26743765. DR EuropePMC; PMC5985646; 29887776. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Tomato yellow leaf curl virus" FT /host="tomato" FT /isolate="Goseong" FT /mol_type="genomic DNA" FT /country="South Korea" FT /collection_date="2008" FT /db_xref="taxon:10832" FT gene 307..657 FT /gene="V2" FT CDS 307..657 FT /codon_start=1 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:Q77PF9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q77PF9" FT /protein_id="AER23871.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT gene 467..1243 FT /gene="V1" FT CDS 467..1243 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:G8I080" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G8I080" FT /protein_id="AER23872.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVLNMFDN FT EPSTATGKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1240..1644) FT /gene="C3" FT CDS complement(1240..1644) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:D9IA56" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D9IA56" FT /protein_id="AER23873.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLHPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRSVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1385..1792) FT /gene="C2" FT CDS complement(1385..1792) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:D3JXC4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D3JXC4" FT /protein_id="AER23874.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGHGDSQMFSQLPNLDDITSSDWSFLKSI" FT gene complement(1701..2774) FT /gene="C1" FT CDS complement(1701..2774) FT /codon_start=1 FT /gene="C1" FT /product="C1 protein" FT /db_xref="GOA:C6JW17" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C6JW17" FT /protein_id="AER23875.1" FT /translation="MPRLFNIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT KELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNQGPTSSYKEYLDEEKNISLKNWTLKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2330..2623) FT /gene="C4" FT CDS complement(2330..2623) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q1ENB7" FT /protein_id="AER23876.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAVNPRPSIY" XX SQ Sequence 2774 BP; 754 A; 535 C; 610 G; 875 T; 0 other; gttgaaatga atcggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg tgtcttactt 60 atacctggac acctaatggc tatttggtaa tttcatgaat gttcattgta attcaaaatt 120 caaaaatcaa atcattaaag cggccatccg tataatatta ccggatggcc gcgccttttc 180 cttttatgtg gtccccacga gggttacaca gacgtcaccg tcaaccaatc aaattgcatc 240 ctcaaacgtt agataagtgt tcatttgtct ttatatactt ggtccccaag ttttttgtct 300 tgcaatatgt gggacccact tcttaatgag tttcctgaat ctgttcacgg atttcgttgt 360 atgttagcta ttaaatattt gcagtccgtc gaggaaactt acgagcccaa tacattgggc 420 cacgatttaa ttagggatct tatatctgtt gtaagggccc gtgactatgt cgaagcgacc 480 aggcgatata atcatttcca cgcccgtctc gaaggttcgc cgaaggctga acttcgacag 540 cccatacagc agccgtgctg ctgtccccat tgtccaaggc acaaacaagc gacgatcatg 600 gacgtacagg cccatgtacc gaaagcccag aatatacaga atgtatcgaa gccctgatgt 660 tccccgtgga tgtgaaggcc catgtaaagt ccagtcttat gagcaacggg atgatattaa 720 gcatactggt attgttcgtt gtgttagtga tgttactcgt ggatctggaa ttactcacag 780 agtgggtaag aggttctgtg ttaaatcgat atatttttta gggaaagtct ggatggatga 840 aaatatcaag aagcagaatc acactaatca ggtcatgttc ttcttagtcc gtgatagaag 900 gccctatgga agcagcccaa tggattttgg acaggtttta aatatgttcg ataatgagcc 960 cagtaccgca accgggaaga atgatttgcg ggataggttt caagtgatga ggaaatttca 1020 tgctacagtt attggtggac cctctggaat gaaggaacag gcattagtta agagattttt 1080 taaaattaac agtcatgtaa cttataatca tcaggaggca gccaagtacg agaaccatac 1140 tgaaaacgcc ttgttactgt atatggcatg tacgcatgcc tcgaatccag tgtatgccac 1200 tatgaaaata cgcatctatt tctatgattc aatatcaaat taataaaatt tatattttat 1260 atcatgagtt tctgttacat ttattgtgtt ttcaagtaca tcatacaata catgatcaac 1320 tgatctgatt acattgttaa tggaaattac accaagacta tctaaatact taagaacttc 1380 atatctaaat actcttaaga aatgaccagt ctgaggatgt aatgtcgtcc aaattcggaa 1440 gttgagaaaa catttgtgaa tccccatgac cttcctgatg ttgtggttga atcttatctg 1500 aatggaaatg atgtcgtggt tcattagaaa tggcctctgg ctgtgttctg ttatcttgaa 1560 atagagggga ttgtttatct cccagataaa aacgccattc tctgcctgag gagcagtgat 1620 gagttcccct gtgcgtgaat ccatgattat tgcagttgag gtggaggtag tatgagcagc 1680 cacagtctag gtctacacgc ttacgcctta ttggtttctt cttggctatc ttgtgttgga 1740 ccttgattga tacttgcgaa cagtggctcg tagagggtga cgaaggttgc attcttgaga 1800 gtccaatttt tcaaggatat gtttttttct tcgtctagat attccttata tgaggaggta 1860 ggtccttgat tgcagaggaa gatagtggga attccccctt taatttgaat gggcttcccg 1920 tactttgtgt tgctttgcca gtccctttgg gcccccataa attccttgaa gtgctttaaa 1980 taatgcgggt ctacgtcatc aatgacgttg taccacgcat cattgctgta cacctttggg 2040 cttaggtcta gatgtccaca taaataatta tgtgggccta gagacctggc ccacattgtt 2100 ttccctgttc tgctatcacc ctcaatgaca atacttatgg gtctccatgg ccgcgcagcg 2160 gaagacacga cgttctcggc gacccactct tcaagttcat ctggaacttg attaaaagaa 2220 gaagaaagaa atggagaaac ataaacttct aaaggaggac taaaaatcct atctaaattt 2280 gaacttaaat tatgaaattg taaaatatag tcctttgggg ccttctcttt taatatattg 2340 agggcctcgg atttactgcc tgaattgagt gcttcggcat atgcgtcgtt ggcagattgc 2400 tgacctcctc tagctgatct gccatcgatt tggaaaactc caaaatcaat gaagtctccg 2460 tctttctcca cgtaggtctt gacatctgtt gagctcttag ctgcctgaat gttcggatgg 2520 aaatgtgctg acctgtttgg ggataccagg tcgaagaacc gttggttctt acattggtat 2580 ttgccttcga attggataag cacatggaga tgtggttccc cattctcgtg gagttctttg 2640 caaactttga tgtatttttt atttgttggg gtttctaggt tttttaattg ggaaagtgct 2700 tcctctttag agagagaaca attgggatat gttaggaaat aatttttggc atatatatta 2760 aataaacgag gcat 2774 //