ID JN674502; SV 1; linear; genomic RNA; STD; VRL; 8159 BP. XX AC JN674502; XX DT 16-NOV-2011 (Rel. 110, Created) DT 01-FEB-2013 (Rel. 115, Last updated, Version 3) XX DE Quail picornavirus QPV1/HUN/2010, complete genome. XX KW . XX OS Quail picornavirus QPV1/HUN/2010 OC Viruses; Riboviria; Picornavirales; Picornaviridae. XX RN [1] RP 1-8159 RX DOI; 10.1007/s00705-011-1192-8. RX PUBMED; 22170478. RA Pankovics P., Boros A., Reuter G.; RT "Novel picornavirus in domesticated common quail (Coturnix coturnix) in RT Hungary"; RL Arch. Virol. 157(3):525-530(2012). XX RN [2] RP 1-8159 RA Pankovics P., Reuter G.; RT ; RL Submitted (12-SEP-2011) to the INSDC. RL Regional Laboratory of Virology, ANTSZ Baranya County Institute of State RL Public Health Sevice, Szabadsag u.7., Pecs, Baranya H-7623, Hungary XX DR MD5; 8d14d89450472e10d0528f73c6b423de. DR EuropePMC; PMC4093843; 24672039. DR EuropePMC; PMC4376133; 25726971. DR EuropePMC; PMC4635496; 26018961. XX FH Key Location/Qualifiers FH FT source 1..8159 FT /organism="Quail picornavirus QPV1/HUN/2010" FT /host="Coturnix coturnix (quail)" FT /strain="QPV1/HUN/2010" FT /mol_type="genomic RNA" FT /country="Hungary" FT /isolation_source="fecal sample" FT /collection_date="Jul-2010" FT /db_xref="taxon:1089138" FT CDS 495..7943 FT /codon_start=1 FT /product="polyprotein" FT /note="contains L, VP4, VP2, VP3, VP1, 2A, 2B, 2C, 3A, 3B, FT 3C, and 3D regions" FT /db_xref="GOA:G8HZ08" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="UniProtKB/TrEMBL:G8HZ08" FT /protein_id="AEP16571.1" FT /translation="MDSTVSFPAYTTYFPHRMARMHRIATSVQRRLNDWGSWELRKLYV FT WDGYKSERKIEFHEYCRDQSKECSAFKRHEIRPQCVMGLDHDQEPYRHFVCGRHEFAET FT PMCCGCVARDEGPAIFGYNLSTHEMLNLPGHALYKHRIRNIPIFGGCKDISGWHYVCMV FT HIQKCKEEDRCCCCDYRQNTFECAGCVYQLDNAELTNHRQQPGEPEWSMSDYNRLLQFY FT PPSRIEVKENGMLRVIPEGTLQGAQCKKLKACRPKMYCDQGYCHASCRRHRSALRCCLC FT SKAYEEEDLKVEALEYPCYGGRHQILKKEGGLHWQCDGHYGDDDCCCCRDDSDDVHTML FT VPYDQVKSDKDWPCYGDRTQIYLGDRKMHWICDAHLGCTTHCCCCDGQFQGQLSSTMSG FT NKHIGASGGSTVNYINYYGAEYANAANAPTQNLDPAAFTDPVTELASSSFVPDLQSPSA FT EQCGYSDRILMVTAGNSCMITQEAASGAVVAYGRTPEYSPNQGNAVDMPTRPGVSCDRF FT YTLESIYWNKTGFNGAPTGGNYVRVRLNLFWALQKLGVFGQNCQFHYLCRSGFLVHVQV FT NATKFHQGCLGVYAIPEDQYWKMGPNGEIIPNEANVAGDLASWTYETMPDDGEWHQWNI FT YPHQLINIRTNNSATLVLPYLNITPACLPKIHCPWSLNLIILADLDYAAGAATTIPITV FT SVAPQCSEFAGLRSAAALEGVPTFQVPGSGQFVSTLRNAGYPLYAHFEPTHSFENPGRF FT VNLLEVAMIGTFADVGQTQAASEEIPDGTAITTKMNAVVGNLVTKTKVFSLDISLSAKY FT LANTYVGMLAKMFQQYRGSLKYTFTYCGSSMVTGKLLIAYTPPGGTEPTDREQAMLGTH FT MVWDIGLQSSVSFTVPYISVSQYRMTSGENTAISVCGWISMRYQTSFVYPPGTPTTSQI FT ITTVAAGEDFQFRVPMDNAYFQGPIKIESAVQQLVSEAMTLKGPATAVNPHANDNVTTA FT EPSELTDAAPALTATETGKTQIDQGDSFAVQPSRISFSRQDTDVEYLLSRYHYVASFSL FT KNEQNTATVFELPIDFSMISNGTNMARTMYCMATYYRCDFDFVFIPVATNPGAGIMDAT FT IQYMFSPNGSVAPPDTESQWATSLNPVTTFRLQQNWSSVRIPFLSTAHYFSTFFNGYGT FT FDKNNYGTNPCNAIGSFYFRLLDQLGVSTVSIQVWVRPVNLKVYCPRPIIRFSHAELES FT ASRHRIVVVDENGKIPNSILRQGEKQGPCARKQGLVDKIRTTMQQAASEMGTNIGASLS FT GNLIKGIEKTILAFEPEDDNHGVLDVLEWVTKLVCATTIIVRGHHDPAIVTSCCVMLGV FT DILTSDPIDYMKRKICQYIGVKYWEHKVKSCLKQGPDGMRDLNTALNIGKGIDWLIHKI FT KELIDWVKDLVVKMKHQETMADELKFYLNEWFLYQKDPSKFTRGSVIKLCDKLLEIKDR FT VQEEAEVPKILFQQLVRIETDIRREVSHSRCRSFEPVALVIRGSPGQGKSLVTGVIGKA FT LSKFYRVQEPYSLPPDPKYFDGYKGQMVTIMDDLGQNPDGADFQFLCQMISTVDFYPPM FT ADLADKGAPFISDFVLASTNLRTFNPPTISDVGAINRRFFIDTTIDLSKDYCNAAGKLD FT VQKALAKCDHEVDVLYTKHCCPLLCGKAVKLVDKKGNKFSVNEVIGLLVSEAERKRKVG FT INVDGLFQGPTAPKPILETVTVSGSALPEDVADALMANQAGDNLIDQLEQAGFIVPVSV FT KDRCLVRQVSHWRRILKASVIGLGVLATIGGLVYAFSHKFVPQGPYEGATKTQLQKPVV FT RTVNVQGPGAPNPDFQFAQKIQKKSLLPLVTGAGPYTAVGIFGRTVLLPKHAAVEPYKL FT NGVELKVMDSYELVLDGGRNLELVCVEFENINEMPDLRKFLPDRIDSYKDVMLVLNSDL FT ISAIVPVGRVTPLSSVCLSGDIVNRSLTYRYPTKSGWCGGLLVKAGQIIGLHVGGDGYN FT GYASVLLAKYFVQKQGKIIKEEPAIWGNKTMSVHMPSRTQLLPSVYHDIVPGTKEPAVL FT SDKDKRFNGNLKETVLSKYKGNVFPEQLVKKGLLSINLDEVRTAVQHYVEQLRPLLPED FT VTEPLTLDQAIEGYHGLQKLDSATSAGFPYNTMGITKKQLMANDRKLLLEGLDLHGYGL FT PYTCYLKDELRSKEKILTGNTRVIEASSINDSLHARQVFGRLYSFFCENPGTATGMAVG FT CNPDRDWTRFQAEFDSSYVISFDYKNFDASLSPMWFAALQGVLQGLGFDENDVEFIIDH FT MCFSVHLWGDTFVHIEGGMPSGCSGTSIFNSMINNIILKTIIPMAYKGIDLDALKILAY FT GDDVLVGYPFPLNGEPIAKIGALFGLTITPADKGEIFTDGGPLELHTFLKRGFKRDDEF FT DFLVHPTMDKTAIYESLRWTRDPKDFQDHVRCLCELMWHHGKEEYEEFRNTLKKSHIYR FT ALNIPPYEYLRRKWLDLF" XX SQ Sequence 8159 BP; 2269 A; 1690 C; 2031 G; 2169 T; 0 other; tttgcatcag ttcgcccctc ccctcaccat acctttttcc cctctttagg actgatactt 60 ggttatgatg agcagaggat ttcgcaagtt atgcttcttg ataaaaagta attcacgaat 120 catgggatta tagcctggaa gtgaacactc atgtggcaag tgggttagta gctctccatg 180 ttcccatgtg cagtggactg acaacagtga gttcggggtt gtgtagtaaa gggaaagtat 240 tacttacccg cacctgctat acgtggtgta cgtaggatac gagttagtag tgcttagcaa 300 ctttaaactg gtgctgaaat attgcaaggt cactgaagtt gtgaacgcga acgctccgcc 360 actgccatgt atagcgtgca atgcataaat ggtgcactac atgatacgag ggaatgggaa 420 accctccatg gccgaatgca gggtgacagc ctgccggcgg atgcctgttg ttagtataat 480 ccgttgtttg ccacatggat tccacagtct cttttccagc atacaccacc tactttcctc 540 accgtatggc aagaatgcac agaatcgcca ctagtgtaca gcgacgcctc aatgattggg 600 gctcatggga actccgcaaa ctgtacgttt gggatggcta taagagtgaa aggaagatag 660 agttccacga gtattgtagg gatcaaagta aagaatgctc tgctttcaag cggcatgaga 720 ttcgaccaca atgtgtgatg ggattggacc acgatcagga accctatcgc catttcgttt 780 gcggtaggca tgagtttgct gaaacaccga tgtgctgtgg ttgtgttgca agagatgaag 840 ggcccgcaat atttggatac aacttgagca cccacgagat gctgaatttg cctggccatg 900 ctttatataa gcatcgtata cgcaatatcc ctatttttgg tgggtgtaag gacatcagcg 960 gttggcatta cgtgtgcatg gttcacatac agaagtgcaa ggaggaggac aggtgctgtt 1020 gctgcgacta tcgccagaat acatttgagt gtgctggctg tgtgtatcaa cttgataatg 1080 ccgagttgac aaatcaccgt caacaaccgg gtgaacccga atggtcaatg tctgactata 1140 accgactact ccaattctat ccaccaagcc gcattgaggt taaggaaaac ggcatgttgc 1200 gagtgattcc tgaagggact ctccaagggg cacaatgtaa gaaacttaag gcctgccggc 1260 cgaagatgta ttgtgaccag gggtactgtc atgctagttg tcgaaggcat aggtcggctt 1320 tgaggtgttg tctttgcagc aaggcctatg aagaagagga cttgaaggtt gaagcattag 1380 agtatccttg ctatggagga aggcaccaga tattgaagaa agaaggaggc ctacattggc 1440 agtgtgatgg acactatggt gatgatgatt gctgttgctg tagagatgat tctgatgatg 1500 tacacacaat gttagttccc tatgatcaag tgaagagtga taaggactgg ccatgttatg 1560 gagacaggac acagatatat ctgggtgatc ggaaaatgca ttggatatgt gatgcacatc 1620 taggatgtac gacgcattgc tgttgttgtg atggtcagtt tcagggacag ttgtctagca 1680 ccatgtctgg taacaaacac ataggggctt ctggcggttc cactgtgaat tatattaact 1740 attatggtgc tgagtatgca aatgcagcga atgcccccac ccaaaacttg gatccagcag 1800 ccttcactga cccagtcaca gagttagctt cctctagttt tgtacccgat ctacaaagcc 1860 catctgctga acaatgtggg tactctgatc gaattttgat ggttacggcc ggtaattctt 1920 gtatgatcac acaggaagct gctagtggag cagtggttgc ctatggcaga acaccagaat 1980 attcacccaa tcaaggaaat gctgtggata tgccaacgag accaggagtt tcatgtgaca 2040 ggttctatac actagaatct atttattgga acaaaactgg gtttaatgga gcgccaactg 2100 ggggtaatta tgtgagagtt cgactgaact tgttttgggc attacaaaaa cttggagtct 2160 tcggccaaaa ctgtcaattc cactacctgt gtcgctcagg gtttttggtg cacgtgcaag 2220 taaatgcaac caaatttcac cagggttgtt taggagttta tgcaataccg gaggatcaat 2280 actggaaaat gggtcccaat ggtgagataa ttcccaatga agccaatgtt gcgggtgacc 2340 ttgcctcatg gacgtatgaa accatgcctg acgatggtga gtggcatcaa tggaatattt 2400 atccccatca attgattaat attaggacca acaacagtgc cacgcttgtg ttgccatatc 2460 ttaacatcac accagcgtgt ctacccaaaa tccattgtcc atggtcattg aacttgatca 2520 tcctggctga cctggactat gctgcaggcg ctgccaccac tattccaata acggtatcag 2580 ttgcccccca gtgttctgag ttcgctggcc tgcgctctgc tgctgctttg gaaggggtcc 2640 cgacatttca ggtgccaggt tccggccaat ttgtttcaac actgcgcaat gctggttacc 2700 cattgtatgc tcactttgaa ccaacacact ccttcgagaa tccgggacgt ttcgtgaatc 2760 tattggaagt agccatgatt ggaacattcg cggacgtggg tcaaacacag gcagcgagtg 2820 aagagatccc cgatggcacc gcaataacga ctaagatgaa tgccgtcgtt gggaacttgg 2880 tgactaaaac aaaagtattt tcattagaca tcagcttgtc cgccaaatat ttggccaaca 2940 cttatgttgg gatgcttgca aaaatgtttc aacaatatcg gggctcctta aagtatacct 3000 tcacatattg tggatctagc atggtgaccg gaaaattgct gatagcgtac acgcctccag 3060 ggggaactga accaacagat agagagcagg cgatgctggg aacacatatg gtctgggaca 3120 ttggcctaca gtcatctgtt agtttcacag taccatacat ctctgtttcc cagtatagga 3180 tgacgagcgg tgagaatacg gcaatatctg tgtgtgggtg gatttctatg cggtaccaaa 3240 cctcctttgt ctacccacct gggacgccaa cgaccagtca aattatcacc actgtggccg 3300 ctggagagga ttttcagttc agagtgccaa tggataacgc gtactttcag ggtcccatca 3360 agatagaatc agctgtgcag caacttgtga gcgaagccat gaccctgaag ggacctgcta 3420 cggcagtgaa cccccatgct aatgataatg ttactactgc tgaaccatct gaattgactg 3480 atgcagcgcc agcactcaca gcgacagaga ctggtaagac tcagatagac caaggagatt 3540 cgtttgcggt ccaaccgtcc cgcatctctt tttcgcgaca agacactgat gttgaatatc 3600 ttcttagccg gtaccattat gtggcctcat ttagtctgaa gaatgaacaa aatactgcca 3660 ctgtgtttga gttacctatt gatttttcta tgatctcaaa tggaacaaac atggcccgta 3720 ctatgtactg catggccact tattatcggt gtgattttga ctttgtgttt ataccagttg 3780 ctacaaatcc aggggcaggt atcatggacg caacgatcca atacatgttt tcaccaaatg 3840 gttctgtggc gccccccgat accgaatcac aatgggcaac atcccttaac ccagtgacaa 3900 catttagatt gcagcaaaat tggtctagtg tccgaatccc gtttttatct actgctcatt 3960 atttctccac cttctttaac ggttatggca catttgataa aaacaattat ggcaccaacc 4020 catgcaatgc aattggctct ttttacttcc ggcttcttga tcagcttggg gtatctacgg 4080 tttcaataca agtttgggtg cgccccgtga atctcaaggt ttattgtcca aggccaatca 4140 ttaggttttc acacgcagag ctggaatcag ctagtagaca ccggattgtc gttgttgatg 4200 aaaatggcaa aattcccaac tcaatattga ggcagggtga aaaacaaggg ccttgtgcta 4260 gaaagcaggg attggtggat aaaatacgca ccactatgca acaggcagcg tctgaaatgg 4320 gtacaaatat aggagcttcc ctatctggaa acctgattaa gggaattgaa aagaccattc 4380 tggcctttga accggaagat gacaatcatg gggtcctcga tgtccttgag tgggtcacaa 4440 agttagtgtg cgcaacaacg ataatcgtca gggggcacca tgacccagcc atagtgacct 4500 catgttgcgt aatgttgggt gtagatatcc taaccagtga tccaattgat tacatgaagc 4560 gcaaaatctg ccagtacata ggtgtcaagt attgggaaca caaggttaag agttgtctca 4620 aacaaggacc ggatgggatg agggacttga acactgccct caacattggg aaagggatcg 4680 attggctgat acacaaaatt aaagagctga tagattgggt caaggatctg gttgtcaaaa 4740 tgaagcacca ggaaactatg gctgatgaat tgaagtttta tcttaatgag tggtttctgt 4800 atcagaagga cccatccaaa tttacgcgtg gttctgttat caaattgtgt gataaattac 4860 tagagattaa agacagggtc caggaagagg cagaggttcc caaaattttg ttccagcaat 4920 tggtcaggat agagacagac attaggcggg aggtgtcaca ttccaggtgc cgatcttttg 4980 aaccagtggc tctggtgata agaggttcac caggacaagg caaatcactg gtcactgggg 5040 tcatcggtaa ggcattgtct aaattttata gagttcaaga accctactcg ctcccacctg 5100 atccaaagta ttttgatggt tataaagggc agatggtcac aatcatggat gacttgggac 5160 agaaccccga cggagcagat ttccaattct tgtgtcagat gatttcgaca gttgactttt 5220 acccaccgat ggctgacttg gcagataaag gagcaccatt tattagtgat tttgttctag 5280 catccacgaa tttgagaact ttcaatcctc caacgatttc agacgtagga gcaataaacc 5340 ggaggttttt cattgacaca accattgatc tgagtaagga ctattgcaat gcagctggga 5400 aattggatgt gcagaaggca ttggcgaagt gtgatcatga ggtggatgtg ctttacacta 5460 agcattgttg cccactactc tgtgggaaag cggtaaagtt ggtggacaag aagggaaaca 5520 agttttcggt gaatgaagtg attggattac tggtctcgga ggctgagaga aaaagaaaag 5580 ttgggatcaa tgttgacggt ttatttcagg gaccaaccgc tccaaaacca attctggaga 5640 ctgtgacagt tagtggttca gctttgcccg aggatgttgc tgatgctttg atggccaatc 5700 aagccggaga caatttgatt gatcaattgg aacaggcagg attcatagta ccagtttctg 5760 tgaaagatag gtgcctcgtt agacaggtgt cacactggcg acgaatatta aaagccagtg 5820 tgataggatt gggggtactt gccacaattg gcggattggt ttatgccttt tcccataaat 5880 ttgtaccaca agggccatac gaaggggcaa cgaaaacaca actgcaaaaa ccggtggttc 5940 ggaccgttaa tgtacaagga ccaggagcac caaatccaga tttccagttt gcccaaaaga 6000 tccaaaagaa gagcttactt ccacttgtga ctggagcagg cccctacacg gcagtgggaa 6060 tttttggtag aacagttctg ctcccgaagc atgcagcagt agaaccatat aaattgaatg 6120 gagtggaact gaaggtcatg gacagctatg agttagtact ggatggagga cgcaacttag 6180 aactggtctg cgttgagttt gaaaacatta atgaaatgcc cgacctgaga aaatttttac 6240 ctgataggat tgattcgtac aaagatgtca tgttggtcct gaatagtgat ttgattagtg 6300 ccatcgtgcc tgttggcaga gtgactcctc tctcttcggt ctgtctcagt ggggatattg 6360 tcaatagatc attgacttat cggtacccca caaagagtgg ctggtgtggt ggactacttg 6420 taaaagctgg gcaaataatt ggattgcatg tagggggtga cggatacaat ggttacgcca 6480 gtgttttgtt ggccaaatat ttcgtacaaa aacagggcaa aataatcaaa gaagaaccag 6540 caatttgggg aaataagaca atgagcgtgc atatgccatc acgcacacaa ctgttaccat 6600 cagtgtacca tgacattgtg cccggtacca aggaaccagc agtgctgtcc gacaaggata 6660 agagatttaa tggtaatctt aaggagactg tcctatctaa gtacaaaggc aatgttttcc 6720 cggagcagct tgtcaagaaa gggttactga gcattaatct tgatgaagtt aggacagcag 6780 tgcagcacta tgtggaacaa ctcaggcccc tgttaccaga ggatgtcact gagcccctga 6840 ccctagatca ggccattgaa gggtaccatg gattgcaaaa attggactcg gccacaagtg 6900 ctggttttcc ctacaacacc atgggaataa caaagaaaca attgatggca aatgacagga 6960 aactattgct tgagggactc gatctgcatg gatatggttt gccctacacc tgttacttga 7020 aggatgaatt gaggagcaaa gagaagatac tgacaggtaa cacaagagtc attgaagcca 7080 gctcaatcaa cgattctctg cacgctcgac aagtgtttgg caggttgtac tccttctttt 7140 gtgaaaaccc aggcacagcg accgggatgg ctgttggatg caatccagac agggattgga 7200 ctagatttca agctgaattt gattcttcat atgtgataag ctttgactac aaaaattttg 7260 atgctagtct atcaccaatg tggtttgccg ccctgcaagg agtactgcag ggacttggat 7320 ttgatgagaa tgatgtcgaa ttcatcattg accacatgtg cttttccgtc catttatggg 7380 gtgacacctt cgtgcacatt gaaggtggaa tgccatcagg ttgctccgga acatccatct 7440 ttaacagcat gatcaacaat atcattttga aaacaatcat tccaatggcc tacaagggaa 7500 ttgacctgga tgctcttaag attttggctt atggtgatga tgttttggtg ggatatccgt 7560 ttcctcttaa tggcgagcct atcgccaaaa ttggtgcact atttggatta acaattacac 7620 cagcggacaa aggggaaatc tttacagatg gcggtccctt ggagctgcac accttcctca 7680 aacgcggctt caagagagat gatgaatttg atttcttggt gcatccaacc atggacaaga 7740 cagcaatcta tgagtcgctg cgctggacgc gcgaccccaa ggactttcag gaccatgtcc 7800 gatgtctgtg tgaactgatg tggcaccatg ggaaagaaga gtatgaggaa ttcaggaata 7860 ccttgaagaa atcccacatt tatcgggcgc taaacatccc gccctatgaa tatctccggc 7920 gaaaatggct ggatttgttt tgagatggtt cgtggaccgt aaaaaccacg tttctgtatc 7980 ggttggtggc gttacacacc cctcctaatg aggctgagaa gggcccggcg tcccgtaaaa 8040 acgcgtcgga taattcattt agtagtatgt atgatttatt tgcttgattc ttagtacagt 8100 ttagaggtgt ttagtttaga ttttgatgat attaattcga gttagaattg gcatttact 8159 //