ID JN663871; SV 1; circular; genomic DNA; STD; VRL; 2696 BP. XX AC JN663871; XX DT 02-JAN-2013 (Rel. 115, Created) DT 02-JAN-2013 (Rel. 115, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus isolate Palampur segment DNA-B, complete DE sequence. XX KW . XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2696 RA Vinothkumar R., Singh A.K., Chakraborty S.; RT "Molecular diversity of begomoviruses causing leaf curl disease of chillies RT in India"; RL Unpublished. XX RN [2] RP 1-2696 RA Vinothkumar R., Singh A.K., Chakraborty S.; RT ; RL Submitted (09-SEP-2011) to the INSDC. RL Molecular Virology Laboratory, School of Life Sciences, Jawaharlal Nehru RL University, New Mehrauli Road, New Delhi, Delhi 110067, India XX DR MD5; 0b8a1aaaa0ea3eb12814e6a28e7f6978. XX FH Key Location/Qualifiers FH FT source 1..2696 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="DNA-B" FT /host="chilli" FT /isolate="Palampur" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="S Takur" FT /collection_date="17-Aug-2009" FT /clone="Xba I-6" FT /db_xref="taxon:223347" FT gene 405..1250 FT /gene="BV1" FT CDS 405..1250 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /db_xref="GOA:L0EKR9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:L0EKR9" FT /protein_id="AGA60306.1" FT /translation="MVFPLPHISYPSQMAFPSPYSTPRRSGYPFNRTYNGNKSFRLWKT FT RKYQNWKRYRSTHSIARSPTELFGDPISKQYTRKEICETQEGSEYLLHNNRYMTSYVTY FT PSKTRTGTDNRVRSYIKLKSLNISGTFAVRKSDLMTEVVQTNGLYGVMSIVVVRDKSPK FT IYSATQPLIPFVELFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIR FT NCIPRTYTTWVTFKDEEEDSCTGRYSNTLRNAIILYYVWLSDVSSQVDLYSNVILNYIG FT " FT gene complement(1276..2154) FT /gene="BC1" FT CDS complement(1276..2154) FT /codon_start=1 FT /gene="BC1" FT /product="MP" FT /db_xref="GOA:L0EL93" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:L0EL93" FT /protein_id="AGA60307.1" FT /translation="MSIGNDGMGMGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKLS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVVEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKPSSAKHSTDVEFRPPKIEIQ FT TKEFTMNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLAIGPNESWASRSEIGLS FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITEDCRAMYKIQCKCSSIEER FT VINFKPNLFKK" XX SQ Sequence 2696 BP; 771 A; 602 C; 508 G; 815 T; 0 other; accgaaaggc cgcgaaaatt ttgaccccct tatcctgacc gttgatgcgt aatcattgca 60 cgccgttatc cgtccgattt gcaacacgtg tatcccacta acagacttta tggaaaataa 120 atgtgtgaat gcgtctcttt tctgcatatg tgttccccat atgtctttat cgtacttcta 180 ttatatgcgt ctgtggtccc cccgcattat ataaagtctt tcacataaat caaattgcct 240 tctttgctat gtatattttg atcggtcgag atcaaaatta atatgttgcg aacatatccg 300 tcgttcgatc ttatgagata tgctttaatt caaacaatac ttgtttgaat tttatgcacg 360 ctgtacaata ctagtttata aaactgctac atatgtgaca ttacatggtg tttccgttgc 420 cacacatttc ctatcccagc caaatggcgt ttccctctcc ttattccacg cctcgtcgtt 480 cgggttaccc attcaacaga acatacaacg gaaacaagag tttccgcttg tggaagaccc 540 ggaagtatca aaactggaag cgctatcgca gtacccattc catagcacgt tctccaaccg 600 aactgtttgg cgatccaatc tccaaacaat atacgcgtaa ggaaatctgt gaaacacagg 660 agggttcgga gtatctgctg cacaacaatc gttacatgac gtcatatgtc acgtatccat 720 caaaaacaag aactggaacg gacaaccgcg ttcgttccta tatcaagcta aagagtctga 780 acatatctgg gacatttgct gttcgtaaat ctgacttgat gaccgaagtg gtgcaaacaa 840 atggtctata cggagtgatg tctatagttg tagtccgcga taaatctcca aagatttatt 900 ctgcgaccca acctttaata ccgtttgttg agctatttgg atctgttaat gcttgcaggg 960 gcagtctgaa agtggcagaa cgccaccatg aacgcttcgt acttctgaat caaacatcca 1020 tcgttgtcaa taccccacat tccaacgcta tcaagaaatt ctgcattcgt aactgcatcc 1080 caagaactta cacaacctgg gtaacgttca aggacgaaga agaagatagc tgtactggac 1140 gatattctaa caccctccga aatgcaatta ttttatatta tgtatggtta agcgatgtat 1200 cctcacaagt cgatctttac agcaatgtaa ttcttaatta cattggataa tatataaaaa 1260 tgcagaagaa acatcttatt ttttgaataa atttggctta aaatttatta cacgctcttc 1320 gatactggag catttacatt ggattttata cattgctcta cagtcttccg taattatatc 1380 tgcaatctct tcccttgtaa tactccccgc ctgtgatgcc gatggacctg gatcaattgc 1440 cgaatcatcc aatccgctca gatttttata tggtctgctg gtgacggacg aaagtccgat 1500 ctccgatctg cttgcccatg attcgttcgg acctatagcc agatagggta cccgtaacga 1560 tcttgaacta tgtcccatta accttgaacc atctacaaga cgccttgttt gtggtttgga 1620 acccacagac cagaaatcaa tgtcgttcat agtgaattcc ttggtctgta tttctatctt 1680 tggtggtcgg aattcgacgt cagtcgaatg tttagccgac gacggcttca atttccctag 1740 catcttacag aagtgtaccc cattcacgac gtttgtgttc tccactcggt attcaactct 1800 ccaaggattc ttatccttga gagagaagaa tgaggaagag tagtagtgca ggttgcaatt 1860 gcatttgatc ggaattgtga attccgcttg ttttgtgtcc ccctccgtca atctcatgtc 1920 gtgtatctct accacgacat gaccaacagc attaattgga acctgactgc gatattccag 1980 aactacgtga tctattttca tgcatctatt cctcaactgg ctaagcttct gctcgaacat 2040 ggatggaaac gacaaggtaa cttctgcagc atcgtttgtg agagcgtact caacgcgctc 2100 agattgaata tacccaccta ctcccatacc cataccatca tttcctattg acatattggc 2160 cgcgcagcgc aaaacccact gaaacacaga aggacagact acgatcaaag aaaccccgac 2220 gaagaagaaa ccctagcaaa caacgaagtt gttttgcaaa gaacggatgt agatggtttt 2280 ataatgctat tgcatgtcat gtctatgtca taccaattac cctaaaatga acggcacata 2340 tttttctacg aaaaaggagt tgtgcatgca tatgggatgt ctgtttattt acggtataaa 2400 ttggaagccc aatttattta attgggctga agtttaaatt cagaagaagt ccatgaaatt 2460 ggcccagcat ccaggtccat tgttaaaatg acatcgtttg tgtgttattg tgtgtataaa 2520 agttagagag aagcagcagt ttctctctct agaactcatc gggtgtctct caacttatct 2580 atataattgg tgtctggagt cctatatata ggtaagacac catatggcat tattgtaatt 2640 gtgaaaagaa aattacttta attcaaattc cctatagcgg cctttcgtat aatatt 2696 //