ID JN663850; SV 1; circular; genomic DNA; STD; VRL; 2758 BP. XX AC JN663850; XX DT 02-JAN-2013 (Rel. 115, Created) DT 02-JAN-2013 (Rel. 115, Last updated, Version 1) XX DE Croton yellow vein mosaic virus-India isolate Bhubaneswar segment DNA-A, DE complete sequence. XX KW . XX OS Croton yellow vein mosaic virus-India OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2758 RA Vinothkumar R., Singh A.K., Chakraborty S.; RT "Molecular diversity of begomoviruses causing leaf curl disease of chillies RT in India"; RL Unpublished. XX RN [2] RP 1-2758 RA Vinothkumar R., Singh A.K., Chakraborty S.; RT ; RL Submitted (09-SEP-2011) to the INSDC. RL Molecular Virology Laboratory, School of Life Sciences, Jawaharlal Nehru RL University, New Mehrauli Road, New Delhi, Delhi 110067, India XX DR MD5; 0a55c7d92b3df9db8694624fddcb7677. XX FH Key Location/Qualifiers FH FT source 1..2758 FT /organism="Croton yellow vein mosaic virus-India" FT /segment="DNA-A" FT /host="chilli" FT /isolate="Bhubaneswar" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="S Sahu" FT /collection_date="13-Apr-2009" FT /clone="BamH I-13" FT /db_xref="taxon:1219877" FT gene 146..502 FT /gene="AV2" FT CDS 146..502 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:L0EKE2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:L0EKE2" FT /protein_id="AGA60261.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDL FT ISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTHVP FT EAQDVQDVQKPRCP" FT gene 306..1076 FT /gene="AV1" FT CDS 306..1076 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:L0ELT3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:L0ELT3" FT /protein_id="AGA60260.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWA FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQSIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1079..1483) FT /gene="AC3" FT CDS complement(1079..1483) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /db_xref="GOA:L0EKN5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L0EKN5" FT /protein_id="AGA60264.1" FT /translation="MDSRTGEPITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMKEDI FT ITVQIQFNHNLRKVLGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINT FT VIRSVDHVLWNVLQHIVYVEQSSSIKFNLY" FT gene complement(1224..1628) FT /gene="AC2" FT CDS complement(1224..1628) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /db_xref="GOA:L0EJ42" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L0EJ42" FT /protein_id="AGA60263.1" FT /translation="MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIA FT CHDHGFTHRGTHHCSSSREWRVYLGNSKSPVFQDNRTPQQAIPNEGRHHHRSDTVQSQP FT EESIGDTQMFPSLPNLDDLTASDWSFLKGL" FT gene complement(1531..2616) FT /gene="AC1" FT CDS complement(1531..2616) FT /codon_start=1 FT /gene="AC1" FT /product="REP" FT /db_xref="GOA:L0EL44" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L0EL44" FT /protein_id="AGA60262.1" FT /translation="MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILQSINCPSDKLFIR FT VAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPNNSSQFHPNFQGAKSSSDVKSYI FT EKDSDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSADAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPMEVYVSPFSSSSFDQVPQELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWTLKNATFITLESPL FT YSGSNQSAAQDSQERDQASTS" FT gene complement(2202..2459) FT /gene="AC4" FT CDS complement(2202..2459) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:L0ELT7" FT /protein_id="AGA60265.1" FT /translation="MGLCISMPSSSSKVKPSSETPDISMSLTLITPPNSTQTSREQSPA FT LMSSPTSRRTVITSTGVSFRSMEDLLEEVNRQLMMQQQRP" XX SQ Sequence 2758 BP; 760 A; 546 C; 632 G; 820 T; 0 other; accggatggc cgcgaaaaaa aaaaagtggg ccccatggcg cactaactga caaagacttc 60 tccaccaatg agaagagctc ctcaaagctt aattgttttg tggtccccta tttaaacttc 120 gccaccaagt agtgcattgc gcactatgtg ggatccatta gtaaacgagt ttcccgaaac 180 cgtacacggg tttagatgta tgttagcagt taaatatttg cagttagtag agaagactta 240 tgctcctgac acattggggc acgatttaat tagggattta atttcagtaa ttagggctag 300 aaattatgtc gaagcgtcca gcagatataa tcatttccac gcccgcttcg aaggtacgcc 360 gtcgtctcaa cttcgacagc ccatatgtga accgtgctgc tgcccccatt gtccgcgtca 420 ccaaagcaaa ggcatgggcg aacagaccca tgtaccggaa gcccaggatg tacaggatgt 480 acagaagccc agatgtccct aagggatgcg aaggcccatg taaggtgcag tcttttgatg 540 cgaagaatga tattggtcac atgggtaagg ttatttgtct ttctgatgtt actaggggta 600 ttgggctgac ccatcgagta gggaaacgtt tctgcgtgaa gtcattgtat tttgttggca 660 aaatatggat ggacgagaac atcaagacca agaaccatac gaatactgtt atgttttgga 720 tcgttagaga taggcgtcct tcaggaaccc caaatgattt tcagcaagtg ttcaatgttt 780 atgataatga gccctctacg gctactgtga agaacgacca gcgtgatcgt tttcaggtgt 840 tgaggaggtt tcaagcaacc gttacaggtg gtcaatatgc tgctaaggaa caatctataa 900 ttaggaaatt ctatcgtgtt aacaattatg tggtgtataa tcaccaggaa gctgggaagt 960 atgaaaatca cactgagaat gctttgttgt tgtatatggc atgtactcat gcctctaacc 1020 ctgtgtatgc tactttgaaa gttaggagtt acttctacga ttctgtaaca aattaatatt 1080 aataaagatt gaattttatt gatgaagatt gttctacata tacaatgtgt tgtaatacat 1140 tccataatac atgatcaact gatctaatta cagtattaat actgataact cctaaattat 1200 ttaagtactt aagaacttgg gtcttaaaga cccttaagaa acgaccagtc ggaggctgtg 1260 aggtcatcca gattcggaag gctaggaaac atttgtgtat ccccaatact ttcctcaggt 1320 tgtgattgaa ctgtatctga acggtgatga tgtcttcctt cattaggaat ggcctgttgt 1380 ggtgttctgt tatcttgaaa tacaggggat tttgaatttc ccaaataaac acgccattct 1440 ctgcttgagc tgcagtgatg ggttcccctg tgcgtgaatc catggtcgtg gcaggctatg 1500 gatatgaagt atgaacaccc acacggtaga tcaactcgtc gacgcctgat ccctttcttg 1560 gctatcttgt gctgcacttt gattggaacc tgagtagagt gggctttcga gggtgatgaa 1620 ggtcgcattc tttaaagtcc aattcttgag tgcagcattt ttctcttcat ccaagaactc 1680 tttataactt gaatttggtc ctggattgca gaggaagata gttggaattc cacctttaat 1740 ttgaactggc tttccgtact ttgtatttga ttgccagtcc ctttgggccc ccatgaactc 1800 cttaaagtgc tttaggtagt gggggtctac gtcatcaatg acgttatacc aggcatcatt 1860 attgtagacc tttgggctaa ggtctagatg accacacaaa tagttatgtg gtccaagtga 1920 tctggcccac atcgtcttgc ccgttctact atcaccctct atcactatac ttatgggcct 1980 caaaggccgc gcagcggcac tgacaacgtt ctcggcagcc cattcctcaa gttcttgtgg 2040 aacttggtca aaagaagaag aagaaaaagg agaaacataa acctccatcg gaggtgtaaa 2100 aatcctatct aaattacatt ttaaattatg atattgaaaa ataaaatctt tagggagttt 2160 ttccctaatt attgctaaag ctgcgtcagc tgaacctgca tttagggcct ctgctgctgc 2220 atcattagct gtctgttgac ctcctcgagc agatcttcca tcgatctgaa actgacccca 2280 gtcgatgtaa tcactgtcct tctcgatgta ggacttgaca tcagagctgg actttgctcc 2340 ctggaagttt gggtggaatt gggaggagtt attagggtga gtgacatcga aatgtctggg 2400 gtttctgaac ttggctttac ctttgaactg gatgagggca tggatatgca gagacccatc 2460 ttggtgtttt tcttgtgcca ctctgataaa taatttatca gatgggcaat ttattgactg 2520 aagaatctcg agcatttgct ctttgggtat tgggcatttt ggataagtga ggaagatatt 2580 tttggcatta acacaaaaag agttaatacg aggcatattg aattggggac actcaaaact 2640 ctgaggaatg ggggactcgg gggacgcatt tatatggtgt ccccaaatgg ctttttcgta 2700 attacgaaag aaaattcaaa attctcacgc tcccaaaagc ggccatccgt ataatatt 2758 //