ID   JN662384; SV 2; linear; genomic RNA; STD; VRL; 1165 BP.
XX
AC   JN662384;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   20-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Narcissus latent virus isolate NL1_11 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1165
RA   Sochacki D., Berniak H., Komorowska B.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1165
RA   Sochacki D., Berniak H., Komorowska B.;
RT   ;
RL   Submitted (09-SEP-2011) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1165
RA   Sochacki D., Berniak H., Komorowska B.;
RT   ;
RL   Submitted (18-JUL-2012) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
DR   MD5; 2fb5d79689126029515a853bc9bd26ab.
XX
CC   On Jul 18, 2012 this sequence version replaced gi:374921808.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1165
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar: Hawera"
FT                   /isolate="NL1_11"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="27-Sep-2010"
FT                   /db_xref="taxon:48200"
FT   CDS             <1..1071
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb-CP"
FT                   /db_xref="GOA:H6UM49"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H6UM49"
FT                   /protein_id="AFA26134.2"
FT                   /translation="DVLLYAQENDLGSVCYMDPCQVFALHYGSSEGLESVDFESDNESA
FT                   NDADDDVTPSLELQMDVENLIPEKGKNAKNTNKDEQSKRTDATAQGESSSPLKSSTEEA
FT                   ANRGDTNPPQGDPLVDDEIVEWVIPKMSSNIVTSPVPVVNGKKLWKRGILKNMPKIMFS
FT                   TTSTMATQVQLTSWVEEVKKSLALKTDDAWTVVITNWCIWCANNGTSSEIDTSQNMEIR
FT                   DSFGKVQEVPIEIFVNPAVENGGLRKIMRHFSGITYEILKVGKQMTAWGNKRGFTEKSM
FT                   IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGTVRKMILDGNIQGSHASYERHVDTDN
FT                   SEYEHGSSVDQRPYLT"
FT   mat_peptide     <1..177
FT                   /product="NIb"
FT   mat_peptide     178..1068
FT                   /product="coat protein"
FT   3'UTR           1072..>1165
XX
SQ   Sequence 1165 BP; 361 A; 229 C; 281 G; 294 T; 0 other;
     gatgttttgt tgtacgctca agagaacgac ttgggatcag tttgttacat ggacccatgt        60
     caggtgttcg cactacacta tgggtcatct gaaggtttgg agagcgtgga cttcgagagt       120
     gacaacgaga gtgcaaatga tgctgatgat gacgtcacgc ccagcttgga actccagatg       180
     gatgtcgaga atctgattcc tgagaaaggg aaaaacgcta agaacacgaa caaagacgaa       240
     caaagcaagc gaactgatgc gactgctcag ggcgagtcaa gtagccctct caagagcagc       300
     acagaggagg ccgccaaccg aggtgacaca aatccaccac aaggagatcc tttagttgat       360
     gatgagatag tcgaatgggt cattccaaaa atgagttcaa acattgtgac ctcaccagtg       420
     ccagttgtca atggcaagaa actgtggaag cgaggaatcc tgaaaaacat gccgaaaata       480
     atgttcagca caacttcaac catggcaact caagttcaac taacatcatg ggttgaggaa       540
     gttaagaaat cactcgccct caaaacagat gatgcgtgga cggttgtaat cacaaattgg       600
     tgcatttggt gcgctaacaa tggcacctca tctgaaattg acacatcaca gaatatggaa       660
     attcgtgata gttttggaaa agttcaagaa gtccccattg aaatttttgt taatccagct       720
     gttgagaatg gtgggttacg gaaaatcatg aggcattttt ctggcataac atatgaaatt       780
     ttgaaggttg gtaagcaaat gacagcctgg gggaacaaga ggggttttac tgagaaatcg       840
     atgatcccct acgcttttga ctactatgtc gtcacaaaca caacaccgaa gactgtgcgt       900
     gagcaattgg ctcaatcgaa agcagcagca attggctcag gcacggtgag aaagatgatc       960
     cttgatggaa acatacaagg gtcacacgct agttatgaac gacatgtcga cacggacaat      1020
     agcgaatatg agcatggttc cagtgttgac cagaggccct atcttactta agttctgcgt      1080
     tcttgaacgt ttgaacttaa taatttatat ttgcattata tgagttttct ttgaagctta      1140
     ttttctctct tttctctttg agctt                                            1165
//