ID   JN662380; SV 2; linear; genomic RNA; STD; VRL; 1172 BP.
XX
AC   JN662380;
XX
DT   13-FEB-2012 (Rel. 111, Created)
DT   20-JUL-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Narcissus latent virus isolate NL1_1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1172
RA   Sochacki D., Berniak H., Komorowska B.;
RT   "Molecular characterization of Polish isolates of Narcissus latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1172
RA   Sochacki D., Berniak H., Komorowska B.;
RT   ;
RL   Submitted (09-SEP-2011) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1172
RA   Sochacki D., Berniak H., Komorowska B.;
RT   ;
RL   Submitted (18-JUL-2012) to the INSDC.
RL   Plant Protection, Research Institute of Horticulture, Konstytucji 3Maja
RL   1/3, Skierniewice, Lodzkie 96-100, Poland
XX
DR   MD5; cc898c85761cab08143d1721aacae0d3.
XX
CC   On Jul 18, 2012 this sequence version replaced gi:374921800.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1172
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus sp.; cultivar: Dutch Master"
FT                   /isolate="NL1_1"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /collection_date="13-Oct-2010"
FT                   /db_xref="taxon:48200"
FT   CDS             <1..1071
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains NIb-CP"
FT                   /db_xref="GOA:H6UM45"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H6UM45"
FT                   /protein_id="AFA26130.2"
FT                   /translation="DVLLYAQENGLGSVCYMDPCQVFALHYGSSKGLEDVKFDNEDESA
FT                   DEDDSNITPDLELQMDVGNLIPEKEKNSQNVNTSDGGKNASNSATGESSKPPENHAGKG
FT                   ADQGDVDPPQGDPLVDDEVVEWVIPKMSPNIGTSPIPVINGKKLWKRGVLKSIPKMMFN
FT                   TTSTMATQAQLTSWVEEVKQALALKTDDAWTVVITNWCIWCANNGTSSEVDTSQTMEIR
FT                   DGFGKVQAIPIEVFVNPAVENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSM
FT                   IPYAFDYYVVTNTTPKTVREQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDN
FT                   SEYEHGNDVDQRPYLT"
FT   mat_peptide     <1..177
FT                   /product="NIb"
FT   mat_peptide     178..1068
FT                   /product="coat protein"
FT   3'UTR           1072..>1172
XX
SQ   Sequence 1172 BP; 328 A; 246 C; 310 G; 288 T; 0 other;
     gatgttctgc tgtacgcaca agagaacggt ctgggttcgg tttgttacat ggacccgtgt        60
     caggtgtttg cgttgcacta tggttcttct aaaggcttag aagatgtcaa gttcgacaat       120
     gaagatgaga gtgcggatga ggatgatagt aacattacac ccgacctgga actccaaatg       180
     gacgttggca acctcattcc tgagaaggag aagaattccc aaaatgtgaa tacaagtgat       240
     ggaggcaaga acgccagcaa ctctgccaca ggcgagtcaa gtaaacctcc tgagaatcac       300
     gcagggaagg gcgctgatca aggtgatgtg gatccaccac agggtgaccc cttagttgat       360
     gatgaggtgg ttgagtgggt cattccaaaa atgagcccaa acattggaac ttcaccgata       420
     ccggtcatca acgggaagaa gttgtggaag cgaggagtat tgaagagcat acccaaaatg       480
     atgttcaaca cgacttcaac catggcaact caagcccaac tcacctcatg ggtggaggag       540
     gtgaagcaag cgcttgcgct taaaacagac gatgcatgga cggttgtcat cacgaattgg       600
     tgcatttggt gcgctaacaa cggcacatcg tctgaagttg atacgtcgca aactatggag       660
     attcgcgatg gttttgggaa ggttcaggcc atccccattg aggtttttgt gaacccagct       720
     gtcgaaaatg gcggtttacg aaagataatg aggcacttct ctggcataac tcacgagatt       780
     ttaaaggctg gtaagcgaat gacagcctgg ggaaataaga ggggctttac tgagaaatca       840
     atgatcccct acgcttttga ttactatgtt gtcacaaaca caacgcccaa gactgtgcgc       900
     gagcaattgg cgcagtcgaa ggcagcagca attggttcag gtgtgacgag gaagatggtt       960
     cttgatggga acatacaagg gtctcatgcc agttacgaac gccatgtcga tacggacaac      1020
     agcgagtacg agcatggcaa tgatgttgat caaaggccct atcttacttg aattctgcgt      1080
     tcttgaacgc ttgaattcaa ctatttgcat tcgctcttta taagttttct cctaagctta      1140
     tttcctttct ctctctcttg agcgttaagg gt                                    1172
//