ID   JN652790; SV 1; linear; genomic RNA; STD; VRL; 2199 BP.
XX
AC   JN652790;
XX
DT   05-FEB-2012 (Rel. 111, Created)
DT   14-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Cowpea severe mosaic virus isolate Queimadas-PB polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cowpea severe mosaic virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus.
XX
RN   [1]
RP   1-2199
RX   PUBMED; 23007993.
RA   Abreu E.E.M., Tinoco M.L.P., Andrade E.C., Aragao F.J.L.;
RT   "Diversity among isolates of cowpea severe mosaic virus  infecting cowpeas
RT   in northeastern Brazil";
RL   Genet. Mol. Res. 11(3):3146-3153(2012).
XX
RN   [2]
RP   1-2199
RA   Aragao F.J.L., Abreu E.F.;
RT   ;
RL   Submitted (07-SEP-2011) to the INSDC.
RL   LTG1, Embrapa Recursos Geneticos e Biotecnologia, PqEB W5 Norte, Brasilia,
RL   DF 70770-900, Brazil
XX
DR   MD5; 6faf908c6724daf29ed210de048de608.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2199
FT                   /organism="Cowpea severe mosaic virus"
FT                   /segment="1"
FT                   /host="Vigna unguiculata"
FT                   /isolate="Queimadas-PB"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="Jun-2011"
FT                   /db_xref="taxon:12261"
FT   CDS             <1..>2199
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:H6UK89"
FT                   /db_xref="InterPro:IPR000199"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:H6UK89"
FT                   /protein_id="AEZ06616.1"
FT                   /translation="IYEIKSWFHDSYHTDATFTTYGDLLAYCKNKWQEHNTEQEANLKQ
FT                   LGANRESVAFEQFRSILDLAVFVNQDSENFKKRLETPDGRCHFLSCYDTEGTLKHYTID
FT                   ASGDVQEMENVDPTLDKLLLDKTNKMVMAAYRMIKYHKDTNLVIKTQLADLVNPTKYTK
FT                   EYQFNGIIGSPLFSAQVLPSVKALPLWQRMVLYTVGQNLGRTTTSWYEGVKDKCMMALS
FT                   KAYATEIKDWPVALKIVVGVVLATVAGKTFWRFYSSMADAGNGGHFVGAVASAFAGSQA
FT                   AVAQSRKPNRFDVAQYRYRNIPLRKRNWAEGQMSLDQSTMLIMEKCKANFVFSNISCQI
FT                   VMLPGRQFIGYKHVFSSLNNPMYVDIYTANKKYKLYYKPENRIYFDGDSELMLYKDASL
FT                   EDIPASCWDLFCFDAEKSLPRGSFPAEILSSKLDRTTNQHIPEWADISARTVNQKLDVE
FT                   FGEYQTIFYSYLQYDVPTKAEDCGSLIIATIDGRKKIVGVHTAGRANRSGFASYIPKVE
FT                   IPVQAQAAEKFFDFLEKEQHVTEGIGKVGTLKKGVWIPLPTKTNLVETPKEWHLGTEKT
FT                   KEPSILSSTDLRLGDKQYDPFVGGIQKYAEPMGVLDDEILRHVATDMVEEWFDCVDPEV
FT                   DTFEEVDLQVAINGLEGMEYMERVPMATSEGFPHILTRKSGEKGKGRFVYGDGEIFDLI
FT                   PGTSVHEAYHTLEATCADSVPALVGIECPKDEKLPLRK"
XX
SQ   Sequence 2199 BP; 694 A; 387 C; 531 G; 587 T; 0 other;
     gatatatgaa atcaaatctt ggtttcatga ttcttatcat acagatgcca ctttcaccac        60
     atatggtgat ttgttggctt actgtaagaa taagtggcaa gaacacaata cagagcaaga       120
     agccaatttg aagcagcttg gtgcaaatag ggagagtgtt gctttcgagc aatttcgttc       180
     tattttggat ctggctgttt ttgtgaacca agattctgaa aacttcaaaa aacgtcttga       240
     aacaccagat gggaggtgcc attttttgtc atgttatgat actgagggca ctctcaaaca       300
     ttacactatt gatgcttctg gggatgtgca ggaaatggaa aatgtggatc ctactttgga       360
     caagcttcta ttggacaaga ccaacaaaat ggtgatggct gcgtacagaa tgattaagta       420
     tcacaaggat accaacttag tcatcaagac acagctagct gatttggtaa atccaacaaa       480
     gtataccaag gaataccaat tcaatggtat tataggatcg cccctcttta gtgcacaagt       540
     tcttccaagt gtgaaagccc tacccttgtg gcagagaatg gttctatata cggtgggtca       600
     aaacttagga aggacaacaa caagctggta tgaaggtgtc aaggacaagt gcatgatggc       660
     actatcaaag gcctacgcaa cagagataaa ggattggcca gttgcactca agatagttgt       720
     tggtgttgtt ttggcaactg ttgcaggcaa aactttttgg cgtttctact cttccatggc       780
     agatgctgga aacggaggac attttgttgg agcagtagct tctgcatttg caggtagtca       840
     agctgctgtt gcacagagta ggaagccaaa caggtttgat gttgctcagt acagatacag       900
     aaacattcca ctccggaaga gaaactgggc agaaggacaa atgagcctag atcaatcaac       960
     aatgttgatc atggaaaagt gcaaggcaaa ttttgtgttt agcaacatta gctgccaaat      1020
     tgtcatgttg ccaggtagac agttcattgg ttacaaacat gttttcagta gtctgaataa      1080
     tcccatgtat gtggatattt atacagcaaa caaaaagtac aagctctact acaagcccga      1140
     aaatagaatc tactttgatg gagatagtga gcttatgctg tataaggatg ccagtcttga      1200
     agatattccc gcaagttgct gggatctctt ctgttttgat gctgaaaaaa gtttgccaag      1260
     agggagcttt ccagctgaga ttctgtctag taaactagat agaacaacca accaacacat      1320
     accagaatgg gctgacattt ctgctcgcac tgtgaatcag aaactagatg ttgaatttgg      1380
     agaatatcag accattttct attcttatct gcaatatgat gtccccacaa aagcagagga      1440
     ctgtggttct ctcatcattg caactattga tggaagaaag aaaattgtgg gtgtgcatac      1500
     tgcaggaaga gcaaacagaa gtggttttgc cagttacatt ccaaaagttg agattccagt      1560
     gcaggcgcaa gctgctgaga aatttttcga ctttttggaa aaagaacaac atgtcacaga      1620
     aggtatagga aaggttggaa cactgaaaaa aggagtgtgg atacccttgc caacaaaaac      1680
     caaccttgtg gaaacaccaa aggagtggca tttgggtaca gaaaagacca aggagcccag      1740
     cattctcagt agcactgatc tgagattggg agacaagcaa tatgatccct ttgttggagg      1800
     aatacagaaa tatgctgaac ctatgggggt gttggatgat gagatcctca ggcatgtggc      1860
     cactgatatg gttgaagaat ggtttgattg tgtggatcct gaggttgata cttttgaaga      1920
     ggtggacctg caagtagcaa ttaatggcct tgaagggatg gagtacatgg aaagagttcc      1980
     tatggccaca tcggaaggtt ttccccacat tctcacaagg aagagtggtg aaaaaggaaa      2040
     aggaagattt gtgtatggag atggtgaaat ttttgatttg ataccaggaa cttctgtgca      2100
     cgaagcttac cacacactag aggcaacatg tgccgatagt gtacctgctc tggttggtat      2160
     tgaatgtccc aaagatgaga aattaccact gagaaagat                             2199
//