ID JN651150; SV 1; linear; genomic RNA; STD; VRL; 2588 BP. XX AC JN651150; XX DT 19-OCT-2011 (Rel. 110, Created) DT 24-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Blueberry necrotic ring blotch virus segment RNA3, complete sequence. XX KW . XX OS Blueberry necrotic ring blotch virus OC Viruses; Riboviria; Kitaviridae; Blunervirus. XX RN [1] RP 1-2588 RX DOI; 10.1099/vir.0.050393-0. RX PUBMED; 23486668. RA Quito-Avila D.F., Brannen P.M., Cline W.O., Harmon P.F., Martin R.R.; RT "Genetic characterization of Blueberry necrotic ring blotch virus, a novel RT RNA virus with unique genetic features"; RL J. Gen. Virol. 94(Pt 6):1426-1434(2013). XX RN [2] RP 1-2588 RA Martin R.R., Quito-Avila D.F., Cline W.O., Harmon P.F., Brannen P.M.; RT ; RL Submitted (06-SEP-2011) to the INSDC. RL Plant Pathology, USDA-ARS, Horticultural Crops Research Unit, Oregon State RL University, 3420NW Orchard, Corvallis, OR 97330, USA XX DR MD5; c5099f15c2fb3c0e57bf64c7dfa55c8b. DR EuropePMC; PMC5663686; 29163564. XX CC GenBank Accession Numbers JN651148-JN651151 represent sequences CC from the 4 segments of Blueberry necrotic ring blotch virus. XX FH Key Location/Qualifiers FH FT source 1..2588 FT /organism="Blueberry necrotic ring blotch virus" FT /segment="RNA3" FT /strain="Georgia" FT /mol_type="genomic RNA" FT /collection_date="2009" FT /db_xref="taxon:1094249" FT CDS 49..228 FT /codon_start=1 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:G5DFC8" FT /protein_id="AEQ55301.1" FT /translation="MAYVDRVVVTTVTPSASVHRTVYSVHVNSVVSSVDTRIGDIFPSP FT ERYTRYTISKGARW" FT CDS 418..1218 FT /codon_start=1 FT /product="hypothetical protein" FT /db_xref="GOA:G5DFC9" FT /db_xref="UniProtKB/TrEMBL:G5DFC9" FT /protein_id="AEQ55302.1" FT /translation="MDLNTVINCILLTSSFFSPVEVRKCPEFTLESKRVSHHFFRNNLY FT LYKPKLPRLLTYKFTPYCEICARKISDYEYDDDILILPLGNLCRNCKSIPPSDDTFGPV FT YNFSFVVPTPSQHCPASSEVYNVTSDGSYILLHRNTAFSKEFRYTISKCHDPYILLHIT FT ELGFVDEILDRITSSIGTIFRTIVTELTHIFGGPIHAVLVTIPHAFLSLVHYISSVIEY FT LLFDVGLANALLITIAFWFKFPWMQATLCALLVIYVTKLNVLFH" FT CDS 1237..1845 FT /codon_start=1 FT /product="p24" FT /db_xref="GOA:G5DFD0" FT /db_xref="InterPro:IPR032441" FT /db_xref="UniProtKB/TrEMBL:G5DFD0" FT /protein_id="AEQ55303.1" FT /translation="MSTRSKYVRSPAPIPRARPVRRMPLSPNSHVSVGTDIYDTFLRSF FT SNPSFLLSCVISGLVVLTHVENIHDGPFGPYLQEHSQNAYVYWVVQNVPKVLGLLTFIP FT VAMTAPRKLTTFVVILAVVSVIVLPPFPVLVYLGASACMHIYLHARLSTTRLFVVALSG FT VVVYYGYKNKDTFVLELPTGTGSDTFSRIVYSAKGTTKN" FT CDS 1659..2438 FT /codon_start=1 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:G5DFD1" FT /protein_id="AEQ55304.1" FT /translation="MHAYISTRTFKYYQVVRCRPLWRGSVLWVQKQRHICFGTPHWYRF FT GHFLTHSVLCERHHQKLNDFGIYKMTVQADLVKYIALQLVVTSGVLWQQSADSGVELGP FT RPKFIPPVSMPANYAELISNLESVFHVAEGHPELVPQYVPQPLSAPVPPVVPPAAPPTV FT APVHSSHPAPAVANPTHAPTHTAPALSRGKRDVSRIVAGVADSVGDVLRPATNLLPGAN FT LVVGAADAIECIASLEDCEGHSELVPCEFCDTEDPLV" XX SQ Sequence 2588 BP; 589 A; 630 C; 523 G; 846 T; 0 other; cacaaatgtc aaattaattc ttgggctcgt cccgcttgac tgccatttat ggcctacgtt 60 gaccgtgtag ttgtcacaac ggttacgcct agtgcgtccg tccaccgaac ggtatattcg 120 gtacacgtta acagcgtggt atcttcagtt gacactcgca ttggagatat tttcccgtca 180 cccgaacggt atactcggta cactattagc aaaggtgcta ggtggtgacg atttattcgt 240 catactatcc cggtttacta tttctttaca ataaatgatc cacctttcga cctgagtgtg 300 ggtcttttag tgtgattgtc agttgttcag ttctagtcgt acgttaggta cggtaaacta 360 agagtccttc ttaaattacc tccaccttac ctaacagtat taaataaact aatcactatg 420 gacttaaata ctgttatcaa ttgtatcttg ctgacgtcta gctttttctc accggttgaa 480 gtgcgcaaat gccctgaatt tacactcgaa tctaagaggg tgtctcatca tttctttcgc 540 aataatttgt atctatacaa acctaagtta cctcggttgt tgacgtataa gtttactcct 600 tattgcgaaa tttgcgcgcg gaaaatcagt gattacgagt atgacgatga tatattgatt 660 ttacccctgg gtaatctttg tcgtaattgc aaatctatac cacccagtga tgatactttt 720 ggtccagtct ataatttttc ttttgttgtc cccacacctt cgcaacattg tcctgcttct 780 agtgaagttt ataacgttac ttcagacggt tcctacattt tattacaccg taacacagcg 840 ttttcaaagg agtttagata caccattagc aagtgccacg acccttatat tctgttacat 900 attactgaat tgggttttgt cgatgagatt ctggacagaa ttactagttc cattggcacg 960 atttttcgaa ctatcgtcac agagttaact catatctttg gtggaccgat ccatgcggtg 1020 ttggttacca taccacacgc attcctttca ttagtccact acatttcatc cgttattgag 1080 tacctcctgt ttgacgtagg tctagctaat gctcttttga tcacaattgc gttttggttt 1140 aaatttccat ggatgcaagc aacattgtgc gccctgttgg tcatctacgt gaccaaacta 1200 aacgttctct ttcattaacc aaattcctga aacaccatgt caactcgtag caagtacgtt 1260 cgttcacccg ctcctatccc acgggcgcgt cctgttagac gcatgcccct gtcacctaat 1320 tcacatgtga gcgtgggaac cgatatctac gatacttttc tacgtagctt ctctaatcca 1380 tccttcttgt tgtcatgtgt tatctcgggt ttggttgtgc tcactcatgt cgaaaacatt 1440 cacgacggac cctttggtcc ttatttgcag gagcactcgc agaacgctta tgtttattgg 1500 gtcgttcaga acgtgcctaa ggtcctcggt cttctcactt ttataccggt tgctatgact 1560 gcacctcgaa agttgactac atttgtggtt attcttgccg tcgtcagtgt tatagtgctt 1620 ccaccatttc cggtattagt ctatctcggt gcctctgcat gcatgcatat atatctacac 1680 gcacgtttaa gtactaccag gttgttcgtt gtcgccctct ctggcgtggt agtgtattat 1740 gggtacaaaa acaaagacac atttgttttg gaactcccca ctggtacagg ttcggacact 1800 ttctcacgca tagtgtactc tgcgaaaggc accaccaaaa actaaacgac ttcggtatat 1860 acaaaatgac tgttcaggct gacttagtga agtacatcgc tctccaatta gtggtgacgt 1920 ccggtgtttt gtggcagcag tctgctgatt ctggtgtaga gctaggtcca agacccaagt 1980 tcatccctcc agtctcgatg cctgctaact acgccgaact tatctctaac ttggagtctg 2040 tgtttcatgt agctgaaggc caccctgaat tggttccgca gtatgtaccg cagcctctca 2100 gtgccccagt tccacctgtt gttccacccg ccgccccacc aacagttgct ccggttcact 2160 ctagtcatcc agcacctgcg gttgctaacc ctacccacgc tcccactcac accgcccctg 2220 ctctgtccag aggtaaacgt gatgtgtctc gaatcgtggc cggtgttgct gattccgtcg 2280 gtgacgtgct tagacccgcc acgaatttgc tgcctggtgc taacttagtt gttggtgcgg 2340 ccgacgctat cgaatgtatt gcttcgcttg aggattgcga gggtcactct gagctggtcc 2400 cttgcgaatt ctgcgacaca gaagatcctt tggtataata aacatctctt tacttttacg 2460 tgtagactag taaagtagta tttcttttct ttcgtcattt aactcggagt gacgtagtgt 2520 ttagtttagt tactttatta gttttggtgt ttcatgcgtt ctacacgaac gtataatttc 2580 attatccg 2588 //