ID   JN642676; SV 1; linear; genomic RNA; STD; VRL; 2220 BP.
XX
AC   JN642676;
XX
DT   05-DEC-2011 (Rel. 111, Created)
DT   05-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Petunia-Lucknow segment RNA3, complete
DE   sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2220
RA   Gautam K.K., Raj S.K., Snehi S.K.;
RT   "Molecular identification of Cucumber mosaic virus associated with mosaic
RT   disease of Petunia in India";
RL   Unpublished.
XX
RN   [2]
RP   1-2220
RA   Gautam K.K., Raj S.K., Snehi S.K.;
RT   ;
RL   Submitted (03-SEP-2011) to the INSDC.
RL   Plant Molecular Virology, National Botanical Research Institute, Rana
RL   Pratap Marg, Lucknow, U.P. 226001, India
XX
DR   MD5; e85fcbc50b7e6dd7847c2135c0c7c69b.
DR   EuropePMC; PMC4188193; 25674612.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2220
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Petunia hybrida"
FT                   /lab_host="Nicotiana tabacum cv. White Burley"
FT                   /isolate="Petunia-Lucknow"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Lucknow, U.P."
FT                   /collected_by="K.K. Gautam"
FT                   /collection_date="Feb-2011"
FT                   /db_xref="taxon:12305"
FT   CDS             122..961
FT                   /codon_start=1
FT                   /product="movement protein 3a"
FT                   /note="movement of the virus in infected plants"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:G1CDF8"
FT                   /protein_id="AEU17154.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHELPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEHTKPSAVARLLK
FT                   SQLNNIESSQYVLTDSKINQNARSESEELNVESPSVAIGSSSASRSETFRPQVVNGL"
FT   CDS             1262..1918
FT                   /codon_start=1
FT                   /product="coat protein 3b"
FT                   /note="encapsidation; cell-to-cell movement and aphid
FT                   transmission"
FT                   /db_xref="GOA:G1CDF7"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:G1CDF7"
FT                   /protein_id="AEU17155.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADATFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVSAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSVMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSAVLPL"
XX
SQ   Sequence 2220 BP; 512 A; 518 C; 533 G; 657 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgctg        60
     tccgcacatt tgagtcgtgc tgtccgcaca tttttatttc agtgtgttag attcccgagg       120
     tatggctttc caaggtacca gcaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgatcttcag aagatattat ttagccctga agccattaag aaaatggctg ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgcgata tcagtccggc ccctcgttcc       300
     cgaagtaacc catggtcgta ttgtttcttt ctttaagtct ggatatgatg tcggtgaatt       360
     gtgctctaaa ggatatatga gcgttcctca agtgttatgc gctgttactc gaacagtttc       420
     tactgacgct gagggatctt tgagaattta cctggctgat ctaggcgaca aggagctatc       480
     tcctatagat ggacaatgcg tttcattaca taaccatgag cttcccgctt tagtgtcttt       540
     ccagccgacg tatgactgtc ctatggaaac tgttgggaat cgtaagcggt gttttgctgt       600
     tgtcatcgaa agacatggtt atattgggta taccggcacc acagcaagcg tgtgtagtaa       660
     ttggcaagca cgattttctt ctaagaataa taactacact catatcgctg ctgggaagac       720
     tctagtactg ccattcaaca gattagctga gcacacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaata acatagaatc ttcgcaatac gttttaacgg attcgaagat       840
     taatcaaaat gcgcgcagtg agtccgagga attgaatgtt gaaagccctt ccgtcgcaat       900
     cggaagttct tccgcgtccc gctccgaaac ctttagaccg caggtggtta acggtcttta       960
     gtgttttcgt tgcatattag attatgtgtg tgtgagagtc tgcacatatt actatatcta      1020
     tagtgctctg tgagagttga cacaatacac atctgagacg agatgccgtg ttgagaagaa      1080
     agcacttctg gtacaaataa ccccacatta ttgctgtgag gttcaattcc tcttgctctc      1140
     ggaggggttc tttttatttt tcagagatgc ttctccacga ggtggcgttt cgtctactta      1200
     ttctaagagt atggtgctgt gtgatttctc tcttgtgttg tagtttgagt cgagtcgagt      1260
     catggacaaa tctgaatcaa ccagtgccgg tcgtaatcgt cgacgtcgtc cgcgtcgcgg      1320
     ttcccgctcc gcttcctcct ctgcggatgc tacatttaga gtcctgtcgc aacagctttc      1380
     gcgacttaat aagacgttag cagctggtcg tcctactatt aaccacccaa cctttgtggg      1440
     tagtgaacgt tgtaaacctg gatacacgtt cacctcgatc accctaaagc caccgaaaat      1500
     agacaaaggg tcttattatg gcaaaaggtt gttacttcct gattcagtca ctgagttcga      1560
     taagaagctt gtttcgcgca ttcaaattcg agttaatcct ttgccgaaat ttgattctac      1620
     cgtgtgggta acggtccgta aagttcctgc ctcctctgac ctgtccgttt ccgccatctc      1680
     tgctatgttc gcggacggag cctcaccggt actggtttat cagtatgctg catctggcgt      1740
     tcaagccaac aacaaattgt tgtatgatct ctcagtgatg cgcgctgata ttggtgacat      1800
     gagaaagtac gccgtgctcg tgtattcaaa agacgatgcg ctcgagacgg atgaattagt      1860
     acttcatgtt gacatcgagc accaacgcat tcccacttct gcggtgctcc cactttgaat      1920
     ccgtgttttc ccagaatcct ccctccggtc ctgtggcggg agctgagttg gtagtgttgc      1980
     tataaactgt ctgaagtcac taaacgctct gcggtgaacg ggttgtccat ccagcttacg      2040
     gctaaaatgg tcagtcgtgg agaaatccac gccagtagac ttacaagtct ctgaggtgcc      2100
     tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtactt ctagcacaag      2160
     atgctagttt cagggtacgg gcatcccccc actttagtgg gggtctccaa aaggagacca      2220
//