ID JN624306; SV 1; circular; genomic DNA; STD; VRL; 2704 BP. XX AC JN624306; XX DT 16-JAN-2012 (Rel. 111, Created) DT 16-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Squash leaf curl China virus isolate SLCCNV-[Pum:IARI] segment DNA-B, DE complete sequence. XX KW . XX OS Squash leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2704 RA Phaneendra C., Mandal B., Rao K.R.S.S., Jain R.K.; RT ; RL Submitted (26-AUG-2011) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New RL Delhi, Delhi 110012, India XX DR MD5; 35c678d2c9becda405c5cc3b37aabbd7. XX FH Key Location/Qualifiers FH FT source 1..2704 FT /organism="Squash leaf curl China virus" FT /segment="DNA-B" FT /host="pumpkin" FT /isolate="SLCCNV-[Pum:IARI]" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="plant showing yellow vein mosaic FT symptoms in the experimental field of IARI" FT /collection_date="Jun-2010" FT /db_xref="taxon:223323" FT CDS 469..1275 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="BV1" FT /db_xref="GOA:H2DL26" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H2DL26" FT /protein_id="AEX55206.1" FT /translation="MAYTTPYTAARRYSSSTNRFSNANKKLKFWKSRKYHGLMRYRNVN FT STGRIPTDLFGDPISRQYTRKEICETQQGSEYVLQNNRYMTSYVTYPAKTRTGTDNRVR FT SYIKLTGLTMSGTFGIRCSDLMTDVDQPTGLYGVVSIVIVRDKSPKIYSTAQPLMPFVD FT LFGSVNSCRGALKVAERHRERFVVLNQSSILINTPHCTAMKKFSVRNCIPRTYSTWVTF FT KDEEEDSSTGLYSNTLRNAILIYYVWLSDVSSQLDMYSNVMLNYIG" FT CDS complement(1329..2174) FT /codon_start=1 FT /product="movement protein" FT /note="BC1" FT /db_xref="GOA:H2DL27" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H2DL27" FT /protein_id="AEX55207.1" FT /translation="MSIRNDNMGLGVGGYIESDRVEYALTNDAAEVTLTFPSMFEQKIS FT QLRNRCMKIDHVLLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSTYFSVKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRAPRIEIQ FT SKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPHLAIGPNESWASRSEIGLG FT SVTSRPYKNLSGLDESAIDPGPSASQVGSITRDEITEIITKTVEQCMKSNVNAPLTKGV FT " XX SQ Sequence 2704 BP; 756 A; 558 C; 516 G; 874 T; 0 other; accgaaaggc cgcgcaattt tttttcctca aatctggccg ttgatttaaa ctaatgcgca 60 acgcgatgaa caacacgtgt cctatgacac atcctttatt aaagtaaagg attgtacgat 120 ttcataatcc gcacatggtg gaacccattg tctagatatg caattctagg aaattgccta 180 agtggtcccg atataaaaag ctgttgttta tattgcgttt gaagtgtggt cccggtatta 240 attcataatg cattcgttac cgttgctcta tcatatctag tgtattttga acggctgaga 300 tcaaaatatg aatttaaccc tcatctcatc gtccgctttg tctacatgtt tgtaatttga 360 tcaaacatgt tttaccgtcc ccattttttt gcaaacattg tactgaatta tatcattata 420 taattcactt tcgtgcatag tcgttgccac ctcttttgtt tgatccaaat ggcttatact 480 acaccttata ctgctgcaag acgatattca tcgtcaacaa acagattttc caacgcaaac 540 aagaaattga aattttggaa gtctcgaaag taccatggtt tgatgcgtta tcggaatgtg 600 aattccacag gcaggatccc gactgacctg ttcggtgatc ctatctccag acaatatact 660 cgtaaggaaa tttgtgaaac tcaacaggga tctgaatatg ttctccagaa caatcgttat 720 atgacatcgt atgtcactta tcctgctaaa acccgaactg gaacggataa cagggtccgt 780 tcgtatatca agctcacagg tcttaccatg tccggaacgt tcggcattcg atgttctgat 840 ttgatgacgg atgtcgatca acccactgga ctctatggcg tcgtgtccat tgttatcgtc 900 cgggataaat caccgaagat ttattcaact gcacaaccac ttatgccatt tgttgattta 960 tttggttcgg ttaattcctg tcgtggagct cttaaggtgg cagaacgcca ccgagaaagg 1020 tttgtggtgc tgaatcaatc ttccatattg ataaacactc ctcattgcac cgcaatgaag 1080 aaattctcag ttcgtaactg catcccgcgc acctactcta cctgggtcac tttcaaggat 1140 gaagaagagg atagttccac cggactatac tcaaacacgc ttcgaaatgc aattctcata 1200 tattatgtgt ggttaagcga tgtatcttct caacttgata tgtacagcaa tgtaatgtta 1260 aattacattg gttagtgcat tcacgatgct gaaaataact tccattaata aattttgcaa 1320 taaatttatc atacgccttt agttagtggg gcgtttacat ttgatttcat acattgttct 1380 accgttttag ttattatttc agttatctcg tccctcgtaa tgcttcccac ttgtgatgcc 1440 gatggaccag gatctattgc ggattcatct aatccgctga ggttcttata tggtctactg 1500 gtaacagaac ccagcccaat ttccgatcta ctagcccacg attcgtttgg accaatcgca 1560 agatgtggga cgcgtaacga tcttgaactg tgacccatta gtcttgatcc atctacaagc 1620 cgtcttgttt gtggtttgga tcccactgac cagaaatcta tgtcgttaac ggtgaattct 1680 ttgctctgta tctctattct tggtgctcgg aattcgacgt cagtcgaatg tttggccgag 1740 gatagtttta atttaccgag catcttacaa aaatgtactc catttactac gttcgtgttc 1800 tccaccctgt attcaactct ccaaggattt ttatccttaa cggagaagta tgttgatgag 1860 tagtagtgca gattgcagtt gcattttatc ggaattgtga attctgcttg ttttgtgtct 1920 ccctctgtca atctcatatc gtgaatttca ataaccacat gcccgactgc attaattggt 1980 acttgactgc gatattcaag tagaacgtga tcaattttca tgcatctgtt tctcaattga 2040 ctgattttct gttcgaacat ggaagggaac gtcagagtga cctccgcagc gtcgtttgtg 2100 agagcgtact ctacgcgatc cgattctatg taccctccaa caccaagacc catgttatca 2160 tttcttatgg acattttggc tgcgcagcag aattggctcc gcaggtgaat aaactataaa 2220 atggatgcta aagaaggttt ggcaaacgaa caaaggacag tttgaaatga aacacaggac 2280 aactgtgttt tcaaggaaca tctaacacct atttataacc gttcaattat tgtgttactt 2340 gctccaaatg agtaagagaa ttgaaatagt gaccgacgat gtatcatatt tattattttg 2400 aacggctgag atcaaaatat gaactacttt tatattggac cattatcata aagcccaatt 2460 tgtcaaaatt ggaaagtgat atatatttct ttgggctatt cagaaaatag cccactaaat 2520 agttatagag catttcatca aaataaggac accgttttaa gcttatttat atggaaagtt 2580 agagagaagt cgcacattct ctctctagac accgaatcgg agtctctcca aaactatggt 2640 atattggggt atggagtctt atatatacta tagagaactt catagcggcc tttcgtttaa 2700 tatt 2704 //