ID   JN609291; SV 1; linear; genomic DNA; STD; VRL; 1189 BP.
XX
AC   JN609291;
XX
DT   01-FEB-2012 (Rel. 111, Created)
DT   01-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-4265 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1189
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1189
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1189
RA   Castro R.;
RT   ;
RL   Submitted (23-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la Investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; ce6759e51b6998fd5096783c6fceb2a9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1189
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Sechium edule"
FT                   /isolate="07-4265"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /clone="Cha4265"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..391
FT                   /gene="AV1"
FT   CDS             <1..388
FT                   /codon_start=2
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6U628"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6U628"
FT                   /protein_id="AEY94442.1"
FT                   /translation="LRHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLR
FT                   DRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMA
FT                   CTHASNPVYATLKIRIYFYDSITN"
FT   gene            complement(385..783)
FT                   /gene="AC3"
FT   CDS             complement(385..783)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H2DFC9"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC9"
FT                   /protein_id="AEY94445.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIHRVEAPLDTRTRIY
FT                   HIEVRFNHNLRRQLALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKFKLY"
FT   gene            complement(530..919)
FT                   /gene="AC2"
FT   CDS             complement(530..919)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H2DFD0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFD0"
FT                   /protein_id="AEY94444.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPVRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTPSRGPVGHQNQDIPHRSPVQPQPTPTV
FT                   GSPQGIPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(861..>1189)
FT                   /gene="AC1"
FT   CDS             complement(861..>1189)
FT                   /codon_start=3
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="UniProtKB/TrEMBL:H6U631"
FT                   /protein_id="AEY94443.1"
FT                   /translation="HLDFNSKVYSNDVEYNVIDDITPHYLKLKHWKELIGAQRDWQSNC
FT                   KYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYKST
FT                   AQDS"
XX
SQ   Sequence 1189 BP; 311 A; 251 C; 283 G; 344 T; 0 other;
     gctgagacac accaacagcg tcatgttctg gttggtccga gataggagac catatggtac        60
     ccctatggat ttcgggcagg tgttcaacat gtatgacaac gagcccagta cagccactgt       120
     aaagaacgat ctgcgtgatc gttaccaagt tatgcacagg ttctcggcta aggttacagg       180
     tggacagtat gccagcaacg agcaggcgtt ggttaggcga ttttggaagg tgaacaacta       240
     cgttgtctac aaccatcagg aagctggcaa atacgagaat catactgaga acgccctctt       300
     attgtatatg gcatgtacgc atgcatctaa ccctgtgtac gcgacattga aaattcgaat       360
     ctatttctat gattcgataa caaattaata aagtttgaat tttatttcat gatgctcaag       420
     tacataattt acataggatt tgtccgtcgc aaagcgaaca gctcgaatta cattgtttat       480
     gcctatggcc cctagtctat gtaaatacaa catgacgcga aatttgaatc tatttaaata       540
     tgtcgtccca gaagctgtca tcgaagtcgt ccagacttgg aaatgaagga atgccttgtg       600
     gagagccaac tgtcggcgta ggttgtggtt gaaccggact tcgatgtggt atatcctggt       660
     tctggtgtcc aacggggcct cgactcggtg tatcctgaaa aataggggat ttggaacctc       720
     ccaaataaaa acggaattct ctgcctgacg cacagtgatg ctctccccgg tgcgtgaatc       780
     cattatttgc gcagttgatg tggaggaaga tagagcagcc gcagtttagg tctattcgtc       840
     gtctgcgaac aggtctcttt ttagctatcc tgtgctgtgc ttttatagag gggagcgtgg       900
     aggatgacga attgagcatt tttttgtgtc cacgctctca aaggtgcatt ttcctctttg       960
     ttgaggaaag ctatatagct gctaccttcc cctggattgc acagcacaat tgatggtatc      1020
     ccgcctttaa tttgaactgg ctttccgtat ttacagttgg actgccagtc cctttgggcc      1080
     ccaataagct ctttccagtg tttcaacttt agataatggg gcgtgatatc atcaatgacg      1140
     ttatactcca catcgtttga atagaccttt gaattgaaat caaggtgac                  1189
//