ID   JN609290; SV 1; linear; genomic DNA; STD; VRL; 1127 BP.
XX
AC   JN609290;
XX
DT   01-FEB-2012 (Rel. 111, Created)
DT   01-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-3182 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1127
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1127
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1127
RA   Castro R.;
RT   ;
RL   Submitted (23-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la Investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; e909d2c6481908d3b9f1baa147b2ed09.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1127
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Cucurbita pepo"
FT                   /isolate="07-3182"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /clone="Es182"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..354
FT                   /gene="AV1"
FT   CDS             <1..351
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6U624"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6U624"
FT                   /protein_id="AEY94438.1"
FT                   /translation="RDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQVMHRFSAK
FT                   VTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATL
FT                   KIRIYFYDSITN"
FT   gene            complement(348..746)
FT                   /gene="AC3"
FT   CDS             complement(348..746)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H6U625"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H6U625"
FT                   /protein_id="AEY94441.1"
FT                   /translation="MDSRTGESITARQAENFLFIWEVPNPLFFRIHRVEASLDTRTRIY
FT                   HIEVRFNHNLRRSLALHKHILHFQVWTTSMTASGTIYLNRFKFRVMLYLHRLGAIRINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKFKLY"
FT   gene            complement(493..882)
FT                   /gene="AC2"
FT   CDS             complement(493..882)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H6U626"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H6U626"
FT                   /protein_id="AEY94440.1"
FT                   /translation="MLNSSSSTLPSIKAQHSIAKKRPVRRRRIDLNCGCSIFFHINCAN
FT                   NGFTHRGEHHCSSGGEFPFYLGGPKSPIFQDTPSRGLVGHQNQDIPHRSPVQPQPTTEL
FT                   GSPQAYPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(824..>1127)
FT                   /gene="AC1"
FT   CDS             complement(824..>1127)
FT                   /codon_start=2
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="UniProtKB/TrEMBL:H6U627"
FT                   /protein_id="AEY94439.1"
FT                   /translation="YSNDVEYNVIDDITPHYLKLKHWKELMGAQRDWQSNCKYGKPVQI
FT                   KGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYKSTAQHS"
XX
SQ   Sequence 1127 BP; 296 A; 235 C; 269 G; 327 T; 0 other;
     cgagatagga gaccatatgg tacccctatg gatttcgggc aggtgttcaa catgtatgac        60
     aacgagccca gtacagccac tgtaaagaac gatctgcgtg atcgttacca agttatgcac       120
     aggttctcgg ctaaggttac aggtggacag tatgccagca acgagcaggc gttggttagg       180
     cgattttgga aggtgaacaa ctacgttgtc tacaaccatc aggaagctgg caaatacgag       240
     aatcatactg agaacgccct cttattgtat atggcatgta cgcatgcatc taaccctgtg       300
     tacgcgacat tgaaaattcg aatctatttc tatgattcga taacaaatta ataaagtttg       360
     aattttattt catgatgctc aagtacataa tttacatagg atttgtccgt cgcaaagcga       420
     acagctcgaa ttacattgtt tatgcgtatg gcccctagtc tatgtaaata caacatgacg       480
     cgaaatttga atctatttaa atatatcgtc ccagaagctg tcatcgaagt cgtccagact       540
     tggaaatgaa ggatatgctt gtggagagcc aagctccgtc gtaggttgtg gttgaaccgg       600
     acttcgatgt ggtatatcct ggttctggtg tccaacgagg cctcgactcg gtgtatcctg       660
     aaaaataggg gatttgggac ctcccaaata aaaaggaaat tctccgcctg acgagcagtg       720
     atgctctccc cggtgcgtga atccattatt tgcgcagttg atgtggaaga agatagagca       780
     gccgcagttt aggtctattc gtcgtctgcg aacaggtctc tttttagcta tgctgtgctg       840
     tgcttttata gaggggagcg tggaggatga cgaattgagc atttttttgt gtccacgctc       900
     tcaaaggtgc attttcctct ttgttgagga aagctatata gctgctacct tcccctggat       960
     tgcacagcac aattgatggt atcccgcctt taatttgaac tggctttccg tatttacagt      1020
     tggactgcca gtccctttgg gcccccataa gctctttcca gtgtttcaac tttagataat      1080
     ggggcgtgat atcatcaatg acgttatact ccacatcgtt ggaatag                    1127
//