ID   JN592721; SV 1; linear; genomic DNA; STD; VRL; 1170 BP.
XX
AC   JN592721;
XX
DT   25-JAN-2012 (Rel. 111, Created)
DT   25-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-3150 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1170
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1170
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1170
RA   Castro R.;
RT   ;
RL   Submitted (17-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; eeec5ec38e36b65118cf1adb2ba9f5d8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1170
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Cucurbita moschata"
FT                   /isolate="07-3150"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..368
FT                   /gene="AV1"
FT   CDS             <1..365
FT                   /codon_start=3
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H2DFC8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC8"
FT                   /protein_id="AEY68339.1"
FT                   /translation="FWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQVMHR
FT                   FSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPV
FT                   YATLKIRIYFYDSITN"
FT   gene            complement(362..760)
FT                   /gene="AC3"
FT   CDS             complement(362..760)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H2DFC9"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC9"
FT                   /protein_id="AEY68342.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIHRVEAPLDTRTRIY
FT                   HIEVRFNHNLRRQLALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKFKLY"
FT   gene            complement(507..896)
FT                   /gene="AC2"
FT   CDS             complement(507..896)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H2DFD0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFD0"
FT                   /protein_id="AEY68341.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPVRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTPSRGPVGHQNQDIPHRSPVQPQPTPTV
FT                   GSPQGIPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(838..>1170)
FT                   /gene="AC1"
FT   CDS             complement(838..>1170)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H2DFD1"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFD1"
FT                   /protein_id="AEY68340.1"
FT                   /translation="AGHLDFNSKVYSNDVEYNVIDDITPHYLKLKHWKELIGAQRDWQS
FT                   NCKYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYK
FT                   STAQDS"
XX
SQ   Sequence 1170 BP; 303 A; 245 C; 279 G; 343 T; 0 other;
     tgttctggtt ggtccgagat aggagaccat atggtacccc tatggatttc gggcaggtgt        60
     tcaacatgta tgacaacgag cccagtacag ccactgtaaa gaacgatctg cgtgatcgtt       120
     accaagttat gcacaggttc tcggctaagg ttacaggtgg acagtatgcc agcaacgagc       180
     aggcgttggt taggcgattt tggaaggtga acaactacgt tgtctacaac catcaggaag       240
     ctggcaaata cgagaatcat actgagaacg ccctcttatt gtatatggca tgtacgcatg       300
     catctaaccc tgtgtacgcg acattgaaaa ttcgaatcta tttctatgat tcgataacaa       360
     attaataaag tttgaatttt atttcatgat gctcaagtac ataatttaca taggatttgt       420
     ccgtcgcaaa gcgaacagct cgaattacat tgtttatgcc tatggcccct agtctatgta       480
     aatacaacat gacgcgaaat ttgaatctat ttaaatatgt cgtcccagaa gctgtcatcg       540
     aagtcgtcca gacttggaaa tgaaggaatg ccttgtggag agccaactgt cggcgtaggt       600
     tgtggttgaa ccggacttcg atgtggtata tcctggttct ggtgtccaac ggggcctcga       660
     ctcggtgtat cctgaaaaat aggggatttg gaacctccca aataaaaacg gaattctctg       720
     cctgacgcac agtgatgctc tccccggtgc gtgaatccat tatttgcgca gttgatgtgg       780
     aggaagatag agcagccgca gtttaggtct attcgtcgtc tgcgaacagg tctcttttta       840
     gctatcctgt gctgtgcttt tatagagggg agcgtggagg atgacgaatt gagcattttt       900
     ttgtgtccac gctctcaaag gtgcattttc ctctttgttg aggaaagcta tatagctgct       960
     accttcccct ggattgcaca gcacaattga tggtatcccg cctttaattt gaactggctt      1020
     tccgtattta cagttggact gccagtccct ttgggcccca ataagctctt tccagtgttt      1080
     caactttaga taatggggcg tgatatcatc aatgacgtta tactccacat cgtttgaata      1140
     gacctttgaa ttgaaatcaa ggtgacctgc                                       1170
//