ID   JN592720; SV 1; linear; genomic DNA; STD; VRL; 1187 BP.
XX
AC   JN592720;
XX
DT   25-JAN-2012 (Rel. 111, Created)
DT   25-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-3228 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1187
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1187
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1187
RA   Castro R.;
RT   ;
RL   Submitted (17-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; fb73ab794b4ceba3c2cc1f68ffebc9b4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1187
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum"
FT                   /isolate="07-3228"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..385
FT                   /gene="AV1"
FT   CDS             <1..382
FT                   /codon_start=2
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H2DFC4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC4"
FT                   /protein_id="AEY68335.1"
FT                   /translation="HTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDR
FT                   YQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMACT
FT                   HASNPVYATLKIRIYFYDSITN"
FT   gene            complement(379..777)
FT                   /gene="AC3"
FT   CDS             complement(379..777)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H2DFB7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFB7"
FT                   /protein_id="AEY68338.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIQRVEAPLDTRTRIY
FT                   HIEVRFNHNLRRALALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKYKLY"
FT   gene            complement(524..913)
FT                   /gene="AC2"
FT   CDS             complement(524..913)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H2DFC6"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC6"
FT                   /protein_id="AEY68337.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPVRRRRIDLNCGCSIFFHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTTSRGPVGHQNQDIPHRSPVQPQPTPSV
FT                   GSPQGIPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(855..>1187)
FT                   /gene="AC1"
FT   CDS             complement(855..>1187)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:H2DFC7"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC7"
FT                   /protein_id="AEY68336.1"
FT                   /translation="SGHLDFNSKVYSNDVEYNVIDDITPHYLKLKHWKELIGAQRDWQS
FT                   NCKYGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYK
FT                   STAQDS"
XX
SQ   Sequence 1187 BP; 311 A; 253 C; 279 G; 344 T; 0 other;
     acacaccaac agcgtcatgt tctggttggt ccgagatagg agaccatatg gtacccctat        60
     ggatttcggg caggtgttca acatgtatga caacgagccc agtacagcca ctgtaaagaa       120
     cgatctgcgt gatcgttacc aagttatgca caggttctcg gctaaggtga caggtggaca       180
     gtatgccagc aacgagcagg cgttggttag gcgattttgg aaggtgaaca actacgttgt       240
     ctacaaccat caggaagctg gcaaatacga gaatcatact gagaacgccc tcttattgta       300
     tatggcatgt acgcatgcat ctaaccctgt gtacgcgaca ttgaaaattc gaatctattt       360
     ctatgattcg ataacaaatt aataaagttt gtattttatt tcatgatgct caagtacata       420
     atttacatag gatttgtccg tcgcaaagcg aacagctcga attacattgt ttatgcctat       480
     ggcccctagt ctatgtaaat acaacatgac acgaaatttg aatctattta aatatgtcgt       540
     cccagaagct gtcatcgaag tcgtccagac ttggaaatga aggaatgcct tgtggagagc       600
     caacgctcgg cgtaggttgt ggttgaaccg gacttcgatg tggtatatcc tggttctggt       660
     gtccaacggg gcctcgactc gttgtatcct gaaaaatagg ggatttggaa cctcccaaat       720
     aaaaacggaa ttctctgcct gacgcacagt gatgctctcc ccggtgcgtg aatccattat       780
     ttgcgcagtt gatgtggaag aagatagagc agccgcagtt taggtctatt cgtcgtctgc       840
     gaacaggtct ctttttagct atcctgtgct gtgcttttat agaggggagc gtggaggatg       900
     acgaattgag catttttttg tgtccacgct ctcaaaggtg cattttcctc tttgttgagg       960
     aaagctatat agctgctacc ttcccctgga ttgcacagca caattgatgg tatcccgcct      1020
     ttaatttgaa ctggctttcc gtatttacag ttggactgcc agtccctttg ggccccaata      1080
     agctctttcc agtgtttcaa ctttagataa tggggcgtga tatcatcaat gacgttatac      1140
     tccacatcgt ttgaatagac ctttgaattg aaatcaaggt gaccgct                    1187
//