ID   JN592719; SV 1; linear; genomic DNA; STD; VRL; 1173 BP.
XX
AC   JN592719;
XX
DT   25-JAN-2012 (Rel. 111, Created)
DT   25-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-3201 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1173
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1173
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1173
RA   Castro R.;
RT   ;
RL   Submitted (17-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; 799fd49edc0ffa95341922b352280fac.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1173
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum"
FT                   /isolate="07-3201"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..378
FT                   /gene="AV1"
FT   CDS             <1..375
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H2DFC0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC0"
FT                   /protein_id="AEY68331.1"
FT                   /translation="NSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQ
FT                   VMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHA
FT                   SNPVYATLKFRIYFYDSITN"
FT   gene            complement(372..770)
FT                   /gene="AC3"
FT   CDS             complement(372..770)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H2DFB7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFB7"
FT                   /protein_id="AEY68334.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIQRVEAPLDTRTRIY
FT                   HIEVRFNHNLRRALALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKYKLY"
FT   gene            complement(517..906)
FT                   /gene="AC2"
FT   CDS             complement(517..906)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H2DFC2"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC2"
FT                   /protein_id="AEY68333.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPVRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTTSRGPVGHQNQDIPHRSAVQPQPTPSV
FT                   GSPQGIPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(848..>1173)
FT                   /gene="AC1"
FT   CDS             complement(848..>1173)
FT                   /codon_start=3
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC3"
FT                   /protein_id="AEY68332.1"
FT                   /translation="LDFNSKVFPNDVEYNVIDDITPHYLKLKHWKELIGAQRDWQSNCK
FT                   YGKPVQIKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYKSTA
FT                   QDS"
XX
SQ   Sequence 1173 BP; 305 A; 248 C; 277 G; 343 T; 0 other;
     aacagcgtca tgttctggtt ggtccgagat aggagaccat atggtacacc tatggatttc        60
     ggccaggtgt tcaacatgta tgacaacgag cccagtacag ccactgtaaa gaacgatctg       120
     cgtgatcgtt accaagttat gcacaggttc tcggctaagg tgacaggtgg acagtatgcc       180
     agcaacgagc aggcgttggt taggcgattt tggaaggtga acaactacgt tgtctacaac       240
     catcaggaag ctggcaaata cgagaatcat actgagaacg ccctcttatt gtatatggca       300
     tgtacgcatg catctaaccc tgtgtacgcg acattgaaat ttcgaatcta tttctatgat       360
     tcgataacaa attaataaag tttgtatttt atttcatgat gctcaagtac ataatttaca       420
     taggatttgt ccgtcgcaaa gcgaacagct cgaattacat tgtttatgcc tatggcccct       480
     agtctatgta aatacaacat gacgcgaaat ttgaatctat ttaaatatgt cgtcccagaa       540
     gctgtcatcg aagtcgtcca gacttggaaa tgaaggaatg ccttgtggag agccaacgct       600
     cggcgtaggt tgtggttgaa ccgcacttcg atgtggtata tcctggttct ggtgtccaac       660
     ggggcctcga ctcgttgtat cctgaaaaat aggggatttg gaacctccca aataaaaacg       720
     gaattctctg cctgacgcac agtgatgctc tccccggtgc gtgaatccat tatttgcgca       780
     gttgatgtgg aggaagatag agcagccgca gtttaggtct attcgtcgtc tgcgaacagg       840
     tctcttttta gctatcctgt gctgtgcttt tatagagggg agcgtggagg atgacgaatt       900
     gagcattttt ttgtgtccac gctctcaaag gtgcattttc ctctttgttt aggaaagcta       960
     tatagctgct accttcccct ggattgcaca gcacaattga tggtatcccg cctttaattt      1020
     gaactggctt tccgtattta cagttggact gccagtccct ctgggcccca ataagctctt      1080
     tccagtgttt caactttaga taatggggcg tgatatcatc aatgacgtta tactccacat      1140
     cgtttggaaa gacctttgaa ttgaaatcaa ggt                                   1173
//