ID   JN591724; SV 1; linear; genomic RNA; STD; VRL; 2357 BP.
XX
AC   JN591724;
XX
DT   23-JAN-2013 (Rel. 115, Created)
DT   28-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Maize stripe virus isolate Kadapa 2 nonstructural protein 3 (NS3) gene,
DE   complete cds; intergenic spacer, complete sequence; and coat protein (CP)
DE   gene, complete cds.
XX
KW   .
XX
OS   Tenuivirus zeae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2357
RA   Srinivas K.P., Sreenivasulu P.;
RT   ;
RL   Submitted (17-AUG-2011) to the INSDC.
RL   Virology, Sri Venkateswara University, Tirupati, Andhra Pradesh 517502,
RL   India
XX
DR   MD5; 2b78df0865b9f72676f2d7d5a7dd3745.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2357
FT                   /organism="Tenuivirus zeae"
FT                   /host="sorghum"
FT                   /isolate="Kadapa 2"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="Jan-2011"
FT                   /db_xref="taxon:3052767"
FT   5'UTR           1..66
FT   gene            67..660
FT                   /gene="NS3"
FT   CDS             67..660
FT                   /codon_start=1
FT                   /gene="NS3"
FT                   /product="nonstructural protein 3"
FT                   /db_xref="InterPro:IPR007974"
FT                   /db_xref="UniProtKB/TrEMBL:K4EQC2"
FT                   /protein_id="AEX91903.1"
FT                   /translation="MNFYTSSVGVLQYDHSLLVMNDLTNIHVTCEDINCSAKLLCYMYD
FT                   VYKSRYPSMDEHSFLRLLRGPDDAEILSTFLRTIIWILSHDRNFPDEFRIPATALVSAY
FT                   IKYYSELKPRAPTTNCWTCRMSKNNLPFQVPSIKGFPAEAELYIVPISDHDGKTIEFSG
FT                   MKTLYKSPSKKKHNYVISSDMPPLSARYTVWDGK"
FT   misc_feature    661..1313
FT                   /note="intergenic spacer"
FT   gene            complement(1314..2264)
FT                   /gene="CP"
FT   CDS             complement(1314..2264)
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:J7FI44"
FT                   /db_xref="InterPro:IPR008864"
FT                   /db_xref="InterPro:IPR009522"
FT                   /db_xref="UniProtKB/TrEMBL:J7FI44"
FT                   /protein_id="AEX91904.1"
FT                   /translation="MATNKPANLNDLQKAINDISKDALKYLTDNKASVTTFHDQIGYAG
FT                   YDAATLIGILKDKGGATLAQDVVKMIVMRYVRGTGFVKDVTKKTKATAGSEEAAALVAR
FT                   YGLVSSVGSNANAITLGRVAQLFPNVSFEVTKQFSGLKMAIDSSDLSMPGTDSLLWDFV
FT                   PQYITLDSSSAPYCTTKSINHILFSIHMIHAFLVTKKTMPETKKKERGLLKDIDMIKYT
FT                   TGLLVITCQSKNLNEAKKKSGRTKVCDPFYVNEKIKESFLALLASFGKNVVCSYGTQVK
FT                   QFLAEQCSLMKIMVDNSSKTQDEMKTAIVEFFEEE"
FT   3'UTR           2265..2357
XX
SQ   Sequence 2357 BP; 706 A; 478 C; 398 G; 775 T; 0 other;
     acacaaagtc ctgggtaaaa aatattattt tttatcaata tatatattac ttctgtccat        60
     cgaagcatga acttttacac atcatctgtt ggagtgctac agtatgacca ctctttgttg       120
     gtcatgaatg atctcaccaa cattcatgtc acttgtgaag atatcaattg ctctgcaaag       180
     cttctctgtt acatgtatga tgtctacaag tctaggtacc catctatgga tgagcactct       240
     tttttgcgcc tactaagggg tccggatgat gcagagatac ttagtacttt cttgaggacc       300
     atcatctgga tactatctca tgatagaaac tttccagatg agtttaggat cccagcaaca       360
     gcacttgttt ctgcttatat taaatactat tcagagctga agccaagagc tcctacaact       420
     aactgctgga cctgcaggat gtcgaaaaac aatctgcctt tccaagttcc ctcaatcaag       480
     ggattccctg ctgaagcaga gctgtatata gttcctatct ctgatcatga tggaaagaca       540
     atagagtttt caggaatgaa gacactatat aaatctccaa gcaagaaaaa acataattat       600
     gttatttcat cagacatgcc tcctctcagt gctagataca ctgtctggga tggcaaataa       660
     gatgaaaatt gtgaaaattt gtctctaggt atcagcggat aatgtaacta agttacattt       720
     tttagataac aaagtgtgct aggcacacta tccgaataat agtcggatga aggccttaac       780
     ctaatttttt tgtttttttt tgtttttttg tttttttgtt tttttgtttt ttcatttttt       840
     tggtttttta tgatatataa acatgcataa cacgacataa ggtatgttat tattaactac       900
     attacataca cgcactaata atagtgaaga taagcacaca agaactaaaa cacaacaaaa       960
     gcaatacaaa tatataatag acatggttca atatattaga aaagcattac catactacta      1020
     tgattagagc tcatgaattt tcaacaccat catcactaca tgcacacaca aacttttttt      1080
     tggtttttca ttttttggtt tttttgtctt tttgactttt ttgatttttt tgttttttaa      1140
     ttttttgatt tttttgtttt ttagtttttg tcacacacaa caataataca caccaaacaa      1200
     cacacacaaa tagaaaacta caatacatag tcaacgcctc agcttcccaa caactgatca      1260
     tccttcccaa caaattttct cagtttatgg tgaaatcacc atagcatgga gagtcactcc      1320
     tcttcgaaga actcaacgat tgcagtcttc atctcatctt gagttttgga gctgttgtcc      1380
     accatgattt tcatcaagct acactgttct gccaagaact gtttgacttg ggtcccatag      1440
     gagcaaacaa cattctttcc gaatgatgca agcagagcca agaaagactc cttgattttt      1500
     tcattcacat agaatgggtc acacacctta gttctgccag acttcttttt tgcctcattg      1560
     aggttcttag actggcaggt gataactagt agaccagtag tatactttat catgtcaatg      1620
     tccttgagca gccctctctc tttcttctta gtctctggca ttgttttctt ggtgaccaag      1680
     aaagcatgga tcatatgaat actaaagaga atatgattta tactcttagt agtgcaatat      1740
     ggtgcagatg agctatcaag tgtaatatac tgagggacaa aatcccacag cagagagtca      1800
     gttcccggca tactaagatc agaagaatca attgccatct taagaccaga gaactgtttg      1860
     gtgacttcaa aagatacatt tggaaagagt tgagcaactc ttcccaatgt aatagcattc      1920
     gcgttgctac ccacagatga cactagtcca tagcgtgcaa ctaaagctgc tgcctcctca      1980
     ctgcccgcag ttgctttagt ctttttagta acatccttga caaaaccagt tcctctgaca      2040
     tatctcatca caatcatctt aaccacatcc tgagcaagag tagctccacc tttgtccttg      2100
     agaattccaa ttagagtagc cgcatcatat cctgcatatc caatctgatc atgaaaagtg      2160
     gtcacagacg ccttgttgtc agtgagatac ttcaaggcat ctttggaaat atcatttata      2220
     gctttctgga gatcattaag atttgcaggc ttgttagtgg ccattgctct caaggggatt      2280
     ggtgcaatgg ttatgcttta gacctttctt cagttgatca atacgaaatc gattaaacga      2340
     ttacccagac tttgtgt                                                     2357
//