ID JN587269; SV 1; linear; genomic RNA; STD; VRL; 4886 BP. XX AC JN587269; XX DT 13-JUN-2012 (Rel. 113, Created) DT 13-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Bean necrotic mosaic virus isolate TF-SP segment M non-structural movement DE protein (NSm) and Gn/Gc glycoprotein precursor (GPp) genes, complete cds. XX KW . XX OS Bean necrotic mosaic virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RC Publication Status: Online-Only RP 1-4886 RA Oliveira A.S., Melo F.L., Inoue-Nagata A.K., Nagata T., Kitajima E.W., RA Resende R.O.; RT "Characterization of Bean Necrotic Mosaic Virus: A Member of a Novel RT Evolutionary Lineage within the Genus Tospovirus"; RL PLoS One 7(6):e38634-e38634(2012). XX RN [2] RP 1-4886 RA Oliveira A.S., Inoue-Nagata A.K., Nagata T., Kitajima E.W., Resende R.O.; RT ; RL Submitted (16-AUG-2011) to the INSDC. RL Cell Biology, University of Brasilia, Instituto de Ciencias Biologicas, RL Campus Darcy Ribeiro, Asa Norte, Brasilia, DF 70910-900, Brazil XX DR MD5; 6d16ccff8468f81bd9dd0d96302f62a7. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..4886 FT /organism="Bean necrotic mosaic virus" FT /segment="M" FT /host="Phaseolus vulgaris" FT /lab_host="Physalis pubescens" FT /isolate="TF-SP" FT /mol_type="genomic RNA" FT /country="Brazil" FT /collection_date="15-Jul-2006" FT /note="acronym: BeNMV" FT /db_xref="taxon:1033976" FT gene 65..1018 FT /gene="NSm" FT CDS 65..1018 FT /codon_start=1 FT /gene="NSm" FT /product="non-structural movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:I3PCT2" FT /protein_id="AER23989.1" FT /translation="MSKLLSKIIELSQELSQGAAGNKNEFQSYENPIVNKNGKQTLLLG FT NYKEKETDELVKQSLDLTKGGFVRNSAGTSELGVYESGLSLSSDVDLDIAAKMIVDKST FT HISNWKSDVLVGNGNNLIKKKLSLKPNWDSLKQFMMLSRVIVWICPVSPDTSGYIKIGL FT KDQCSEDKEAFVAKGEGKINTPICFYFNLNWSYPKEKNTLEFCPIIIMESDQKYKKGAP FT LASVMYSWCKEFCSSPRYYEKSECYVIPISPAVRFQSAAMIEACKYMIPKGSSGKAIRK FT QIESLGKHLEQAAIDEENEEVSNETESSFPPLKLMT" FT gene complement(1318..4803) FT /gene="GPp" FT CDS complement(1318..4803) FT /codon_start=1 FT /gene="GPp" FT /product="Gn/Gc glycoprotein precursor" FT /db_xref="GOA:I3PCT1" FT /db_xref="InterPro:IPR005167" FT /db_xref="UniProtKB/TrEMBL:I3PCT1" FT /protein_id="AER23988.1" FT /translation="MGFREVFVIICLFCLNLVFLDFSINAHTRGDHELSQEISFEDLSK FT DAVESATLLGVDGKFKSGPLLDKPDIDDQMIPNRGKRTEPSSSSPPSSEQLTCKRINSN FT NCKIVGKTSFNFYYQISDNETTVSCLSSESQDYKSCNPDAMQEFLSADVLPITTMLNKR FT VLSVGSKYFILNSADPSSYPVQDHGSVQLGLGNIYNVRLTGGCNITKVSLANPFYITLS FT STAKKCLCCKKIGSEEVNLMKFSSEKTIELSEDSLDGTHVLLCGDRVSEIPKIDINKRN FT CLVKYKGKRYQQSACVHFNLLRYLIVSIILFFPVSWFLNKTKESMFLWYDILGIVLYPL FT LYALNWIWQYFPLKCSCCGNFSLITHKCYEKCVCNLSKAKKEHAETCQILTGKIFKMKE FT VKAEKREAITPDEIVSLNSEQEKPPVIKSSRFQTFQTIINTKISSETLLLITKILLGFL FT IFSQIPKTMAMSNEQALCVNYCRAQIGCSKFLWKNEETCISRKDLKCNCVIGKELISEE FT AYINGTRYAVSMPNTCMDDTCDVAEGDVENLIVCRLGCKKLRSLKTAKLSKRTFSTGIF FT SQSLSMNQIYSTLRMQDGYIDSLEALSTLGDPPSDKVVQIDDDIPEGILPRQSFVYSSV FT VDGKYRYLMSFDAIQSSGYVYSMKMLKWHPPQELVVYVKEAGVTYTIKPLYHTAPISST FT HTHVYTTCTGNCETCRKEHPLSGYQDYCISPTSNWGCEELGCLAIGEGSTCGYCRNVYD FT LSKMYSINQVLSSHVTVKVCFKGFAGATCQTITDEIPYQNSYYQISLDADLHNDDLGSG FT SRIAIDPNGLIMKGNIANLKDSSTAFGHPQLDKTGKLLFGKANLDLNDFTWSCAVIGSK FT HVDIKKCGYDTYHQYIGLEPISNHYASEISDEKLFVKKDFKVGKINLIVDLPSELFKQP FT AKKPKVSLINSECKGCLSCGSGIKCTLEMTSDSIFAGNINWEHCTSEPEYIAMKKGSNI FT IKVNMFCLKNPSLTKMILEPSGDSDLSLEFETRNVEIIDPETIIDHNDDAFNEEVDYDN FT DTSFKSLWDYLKSPFNWIASFFGDFFEIVRVLLVLACCVFAAICLSKLFEICREYYKQE FT HYKKSVKSDLKDMDEEDPEDPEDILGNLKNQITEDTLYRRNLKPKKSPFDSVMT" XX SQ Sequence 4886 BP; 1524 A; 891 C; 892 G; 1579 T; 0 other; agagcaatcg gcgcattaag aatatccgaa cggaagaatt tcaatttaat taacattgtg 60 caatatgtcg aagctgttgt caaagatcat tgaattgagc caagagctga gtcaaggtgc 120 tgctgggaat aagaatgaat tccaatcata tgagaacccc attgtgaaca aaaatgggaa 180 acagacccta cttcttggaa attacaagga aaaagaaacc gatgagctag ttaaacaaag 240 tttagaccta actaaaggtg gattcgtgag gaattcagct ggaacttctg agttaggtgt 300 atatgagtcc ggattaagcc tctcttctga tgttgatttg gatatcgctg caaaaatgat 360 tgttgataag agcacccata tcagcaattg gaagagtgat gtcctagtcg gcaatggaaa 420 caatctgata aaaaagaagc ttagtctcaa acctaactgg gacagtttga agcaattcat 480 gatgttgtca agggttatcg tgtggatatg ccctgtttct cctgatacat caggctacat 540 caagataggt cttaaagatc aatgttctga agataaggaa gcatttgttg ctaaaggtga 600 aggaaagatc aacacaccta tatgttttta tttcaactta aactggtcat accccaaaga 660 aaagaacact cttgagttct gcccaattat aattatggaa tcggatcaaa agtacaagaa 720 aggagctcct cttgcttctg tgatgtattc ttggtgcaaa gaattctgta gctctcctag 780 atactatgag aaaagtgaat gctacgttat ccccatatct ccagcagtaa gattccaatc 840 ggctgctatg atcgaagctt gcaagtacat gatacctaaa ggttcttctg gtaaagctat 900 aagaaagcaa attgagtctc taggtaaaca tctagagcag gctgcaatag atgaagagaa 960 tgaagaggtt tctaatgaaa ctgaatccag tttccctcct ttgaaactca tgacatgagt 1020 atcaaattta tgttcaaata aatatatctc ttgtaaaaga gaaataaaat aaaataaaat 1080 aaaaataaat aaaaacaaaa aacaaaaaaa caaaaaacaa aataaaaata aaaataaata 1140 aatatatata tatatatata taataatata tatatattta aaagtgtgta tgtttagtaa 1200 ataaggtctt cggaccagtt ttggttaaac caaaattggg tctttcgacc tcttttttgg 1260 tttgttgttt tgtaattttt atgtgtttta tttattattt gctacttgtg aatataatca 1320 agtcataaca gaatcaaaag ggcttttctt aggttttagg tttcttctgt acagggtgtc 1380 ttctgttatt tggtttttaa gattgcctaa aatatcttct gggtcttcag gatcctcttc 1440 atccatgtcc tttaaatcag attttacaga ttttttgtaa tgttcttgtt tatagtattc 1500 tcggcaaatc tcaaacagtt ttgatagaca aatggcggca aaaacgcaac aagcaaggac 1560 aaggagaact cttacaattt caaagaagtc accgaaaaat gatgcaatcc aattaaaagg 1620 actttttaaa taatcccaca gagatttgaa agaagtgtca ttgtcataat ccacttcttc 1680 attgaaagca tcgtcattgt gatcgattat tgtttcaggg tcaataattt ctacattcct 1740 ggtctcaaat tccaaagaca gatcgctgtc tccagaaggt tccagaatca tctttgtcaa 1800 agaagggttt tttaggcaga acatattaac ctttatgatg ttgcttcctt tcttcatagc 1860 tatatactct ggctcggatg tgcaatgctc ccagtttatg tttcctgcaa agatactatc 1920 agatgtcatt tctagagtgc actttatccc agagccacaa cttaagcaac ctttgcactc 1980 agaattaatt aaactgactt taggcttttt ggctggctgt ttaaatagtt ctgaaggcaa 2040 gtctactatt aaattgatct tccctacctt gaaatccttt tttacaaaca gcttttcatc 2100 tgaaatctcg cttgcataat ggttagagat tggttcaagg ccgatatatt ggtggtaggt 2160 gtcatagcca catttcttta tatctacgtg tttactgcct atgacagcac aactccaagt 2220 aaagtcattg agatctagat ttgctttgcc aaacaacagt ttgcctgtct tgtccaattg 2280 tggatggcca aatgctgtgg aagaatcttt caaattggct atgttaccct tcatgattaa 2340 accgttagga tcaattgcaa ttctagagcc tgaacctaag tcatcattgt gcagatctgc 2400 atccaatgaa atctgataat atgaattctg ataagggatt tcgtcggtta tggtttgaca 2460 tgtagcacct gcaaatcctt taaagcacac tttcactgtc acatgagaag ataaaacctg 2520 atttatagag tacattttcg ataaatcata gacatttcta caatacccac atgtagaacc 2580 ttctcctatg gctaagcatc ctaattcctc gcaaccccag ttagatgttg gtgaaataca 2640 gtaatcctga taaccagata atggatgctc ttttcggcat gtttcacaat tgcctgtgca 2700 tgtggtgtaa acatgtgtat gagttgaaga tataggagct gtatgataca gtggtttgat 2760 tgtgtatgtg actcctgctt ctttgacata tacaaccagc tcttgagggg ggtgccattt 2820 tagcatcttc attgaataga cgtaaccaga ggattgtatg gcatcaaatg acatcaaata 2880 tctgtatttg ccatcaacca cagaactata tacgaatgat tgtctaggca atattccttc 2940 aggtatgtca tcgtcaatct ggaccacttt gtctgaagga ggatcgccta gagttgatag 3000 agcctccaaa gaatctatgt atccgtcttg catcctaaga gtagagtata tctgattcat 3060 ggaaagtgat tgagaaaaaa ttccggtgga aaaagtcctt ttgcttaact tggctgtttt 3120 caagcttctg agctttttac atccaagcct gcacacgatc aagttttcaa catcgccttc 3180 agcaacatcg catgtgtcat ccatacaggt atttggcatg gaaacagcat atctagttcc 3240 gttgatgtaa gcttcttcac taatgagttc tttgccaatg acacagttgc attttaaatc 3300 ctttctgctg atgcatgttt cttcattctt ccaaaggaat ttgctgcatc caatttgtgc 3360 tctgcaataa ttgacgcata aagcttgctc attggacatt gccattgtct taggtatttg 3420 agaaaagatc aaaaaaccta aaaggatttt tgtaatgaga agcagcgttt cagaacttat 3480 cttagtgttg attattgttt ggaacgtttg gaatctggat gatttgatta ccggtggctt 3540 ttcctgttct gagttcaatg aaacaatttc atctggtgtt attgcttccc ttttttcagc 3600 tttcacctct ttcatcttaa agattttccc tgtaaggatc tggcatgttt ctgcatgctc 3660 cttttttgct tttgataggt tgcaaacaca cttttcatag catttatgag taattaaaga 3720 gaagttcccg cagcatgagc actttagagg aaaatattgc caaatccagt tcaatgcata 3780 caataaagga tacaatacaa tgcccagaat atcataccac aaaaacattg attctttagt 3840 tttgttaagg aaccaagaaa cagggaaaaa caagataatg gaaactatca agtacctcaa 3900 caaattaaaa tgaacacaag cagactgctg atatctttta cctttatatt tcactagaca 3960 gtttctcttg ttgatgtcaa tttttggtat ttcggagact ctgtctccac acaaaagaac 4020 atgagtacca tctaaactgt cttctgacaa ttcaatggtc ttttcgctgc tgaatttcat 4080 caaattaact tcttcagatc cgatcttttt acagcataaa catttctttg ctgtactgga 4140 caatgttatg taaaaagggt ttgccaggct cactttggta atgttgcaac ctcctgttaa 4200 tctgacatta taaatgtttc ccaaccccag ttgaacactt ccatgatctt gcactggata 4260 agaactaggg tcagctgaat tcagaatgaa gtactttgat cccacagaaa ggactctttt 4320 gttcaacatg gtggttattg gtagcacgtc agcagaaaga aattcttgca tggcatcagg 4380 gttgcatgat ttgtaatctt gagattcact tgacaagcaa gaaacagtag tctcattgtc 4440 agagatttgg tagtaaaagt taaagcttgt tttgcccaca attttgcagt tgtttgagtt 4500 tattctcttg caagttaact gctcagaaga tggagggcta gacgaagatg gttctgttct 4560 tttacctctg ttaggtatca tttgatcatc tatatctggc ttatccagca gaggtccact 4620 cttgaacttt ccatcaactc ctaacaaggt tgcactttcc acagcatctt tagataagtc 4680 ttcaaatgaa atttcctgag acaactcatg gtcacctcta gtgtgtgcat tgatggagaa 4740 atccagaaaa accagattca aacagaataa acaaattatc acaaagacct ctcgaaaacc 4800 catgctcaat aatagaagga ttatgtatct cttatgtaaa tcttatttat tttctaccaa 4860 tttattcttt ttgcgccgat tgctct 4886 //