ID JN587268; SV 1; linear; genomic RNA; STD; VRL; 2584 BP. XX AC JN587268; XX DT 13-JUN-2012 (Rel. 113, Created) DT 13-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Bean necrotic mosaic virus isolate TF-SP segment S non-structural silencing DE protein (NSs) and nucleocapsid protein (N) genes, complete cds. XX KW . XX OS Bean necrotic mosaic virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RC Publication Status: Online-Only RP 1-2584 RA Oliveira A.S., Melo F.L., Inoue-Nagata A.K., Nagata T., Kitajima E.W., RA Resende R.O.; RT "Characterization of Bean Necrotic Mosaic Virus: A Member of a Novel RT Evolutionary Lineage within the Genus Tospovirus"; RL PLoS One 7(6):e38634-e38634(2012). XX RN [2] RP 1-2584 RA Oliveira A.S., Inoue-Nagata A.K., Nagata T., Kitajima E.W., Resende R.O.; RT ; RL Submitted (16-AUG-2011) to the INSDC. RL Cell Biology, University of Brasilia, Instituto de Ciencias Biologicas, RL Campus Darcy Ribeiro, Asa Norte, Brasilia, DF 70910-900, Brazil XX DR MD5; f8046397ce15bdaa1cbfaa4517d5e382. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..2584 FT /organism="Bean necrotic mosaic virus" FT /segment="S" FT /host="Phaseolus vulgaris" FT /lab_host="Physalis pubescens" FT /isolate="TF-SP" FT /mol_type="genomic RNA" FT /country="Brazil" FT /collection_date="15-Jul-2006" FT /note="acronym: BeNMV" FT /db_xref="taxon:1033976" FT gene 61..1380 FT /gene="NSs" FT CDS 61..1380 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural silencing protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:I3PCT0" FT /protein_id="AER23987.1" FT /translation="MQTLVNLGKEFGSQVNQKHVIDTYWVKTKFSGSNNFGSNYVQMYS FT DEDIQTGFRFNEPGMEIISDVPDVLQKDSSVEVFSDLGVSFVFDAEKVTIKISHGSVNK FT LGVKHKGHLKVLEFEDPNVIEGTVDRNLVASVPGINNDDIEIKNETINALPSMNMIHLK FT EDSYKITKSPNCFFGKRNMLRRGWIGTGYVTNIHPIGYVLPKATNRCLGTLSLKSMEST FT VEKGVLSSDIAHAELSLGGKCNFHLFSSCKGDLGDVSFMRNVKFFEDKHERVFTIYVKT FT SSDIDNNKSSILVIFKTVCYSESKEGTVSVSSDDKLQGSINLSELPESGFFDHKAKSML FT IVQSLIKIHNEFASKISEKLNKSVIVYTLRSVDSFKKEITEIDSRAMNYLISPEGEVFF FT LSRTFQESLPTNMSSLTYFFDLQTFGWSANYLSGDLVVRK" FT gene complement(1696..2508) FT /gene="N" FT CDS complement(1696..2508) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:I3PCS9" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:I3PCS9" FT /protein_id="AER23986.1" FT /translation="MGSNALKLNAENLKKLLLFNDEVEFEQQSTGFKFVDFCKAHEKDK FT FNPTSALTFLKNRKAIYSLCKASTFNYGVYEIKKGDKATDTDFTFKRLDAFLRVKLLTH FT CTKIWDGTDPNAQTALCSELAKIPIVKAYGLEVSDKQKCYIAIVLGGNLSLLASLPGCE FT VACFALAIFQDLKKNELGIKSDFDTKDQAGRVAAVLDAKNFVFGEPENEKLKKIAGILK FT EMTPTRRGHAALTKYAEQLSIISGVIGVTFEMPGTSKAKESKNHGFMS" XX SQ Sequence 2584 BP; 801 A; 463 C; 474 G; 846 T; 0 other; agagcaatcg gtgcgattaa agaattcaaa gcttaaacaa agtgagacat tatccacacc 60 atgcagactc tcgttaacct aggaaaagag tttggttcgc aagtgaacca gaagcatgtt 120 atagatacct actgggtcaa aactaaattt agtggttcca acaatttcgg atcaaattat 180 gttcagatgt attcagatga agacattcaa acagggttta ggttcaatga acctggaatg 240 gagatcattt ctgatgttcc agacgtactc caaaaggatt ccagtgttga ggtcttttca 300 gatttaggag tttcttttgt gtttgacgca gaaaaagtta ccatcaaaat atctcatggc 360 tctgtcaaca agctgggtgt caagcataaa ggtcatctta aagttttaga gtttgaagat 420 ccaaatgtta ttgaaggcac tgttgacagg aatttggttg catcggtacc aggcataaac 480 aatgatgaca ttgagattaa aaatgaaaca atcaatgcac tgccttccat gaacatgatt 540 catcttaagg aagactctta taaaatcaca aaatcaccta attgcttttt tggcaagcgg 600 aacatgctcc gaagaggttg gattggaaca ggatatgtta ctaacatcca tccgattggt 660 tatgtgttgc ctaaagcaac taacagatgt ttagggacat tatccttaaa atctatggaa 720 agcacggttg aaaaaggtgt tttgagctct gatatagccc atgctgagct gagccttgga 780 gggaaatgca atttccacct attcagcagt tgcaaagggg atttaggtga tgtttcattc 840 atgagaaatg tcaagttctt tgaagacaaa catgaaaggg ttttcacaat ctatgtcaag 900 acttctagtg acatagacaa caataaaagc agcattttgg ttatatttaa aaccgtttgc 960 tactcagaga gcaaagaagg cacagtttct gtgtcttctg atgacaagct gcaaggtagc 1020 atcaacctgt cagagctacc tgagtctggg ttctttgatc acaaagccaa gtctatgtta 1080 attgtacaat ctttaatcaa aatccacaac gagtttgcta gcaaaatttc tgaaaagctg 1140 aacaagagcg ttattgttta cactttgaga tctgttgact ccttcaaaaa ggagatcaca 1200 gagattgatt ctagggcaat gaattattta ataagtcctg aaggagaagt gtttttcctc 1260 tcaagaacat tccaggaatc tttgccgaca aacatgagtt ctttgactta cttttttgat 1320 ttgcaaacct tcgggtggtc agctaattac ctttcaggtg atttggtggt cagaaagtaa 1380 tcttatcaac atatataaag cttaatttac tcaaatttta tttagagctt tcaatgttag 1440 ttttagtaga taaataagta aaaacaaaaa acaacaaaaa aagcataaaa acaaaaaacc 1500 aaaaagagag ggttttccct ccaaattggc ttgaccaact tgtgggagaa taatctcctc 1560 tttttgggtt ttttgatttt ttaattttta tttggttttt tattttattt atttttattt 1620 tatttattta tatactagtt tattatataa ttatatataa ttatatatat taacatcatc 1680 aacattcatg aatgtttagc tcatgaagcc atgatttttg ctttccttag ccttgcttgt 1740 tccaggcatt tcaaatgtca cacctatgac acctgaaata atgctcagtt gctcagcata 1800 tttggttaaa gcagcatgcc ctcttcttgt tggtgtcatc tcctttaaga ttcctgcaat 1860 ctttttcaat ttctcgttct ctggttctcc aaaaacgaaa ttctttgcat ccaacacggc 1920 agcaactcta ccagcttggt ctttagtatc aaaatcactt ttaatgccga gctcattctt 1980 cttaagatct tggaaaatgg ctaaagcaaa gcaagcgact tcacagccag gtaaggaagc 2040 aaggagagag aggttgcctc ctagaactat agctatatag catttttgct tgtcagacac 2100 ttctaagcca taggctttga ctattggtat ttttgccagc tcactacaga gtgcagtttg 2160 agcattggga tcagttccat cccaaatttt ggtgcagtgt gtcagaagtt tcactctcaa 2220 aaaagcatca agccttttga aagtgaaatc cgtatcagtg gctttatcac cttttttgat 2280 ttcatataca ccgtaattaa atgtgcttgc tttgcacagg gaataaattg ctttcctgtt 2340 cttaaggaaa gtcaatgcag atgtagggtt gaatttgtct ttctcatgag ccttgcaaaa 2400 atcaacaaat ttaaaaccag ttgactgttg ctcaaactca acttcatcgt tgaacaaaag 2460 tagtttcttc agattctcag cattcaactt tagtgcatta gatcccatct tgttgtctta 2520 gaaggtcact atgtatataa atttcaattc agattttctt ttcttttctc gcaccgattg 2580 ctct 2584 //