ID JN579656; SV 1; linear; genomic RNA; STD; VRL; 2357 BP. XX AC JN579656; XX DT 03-SEP-2012 (Rel. 114, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Maize stripe virus isolate Tirupati segment RNA3, complete sequence. XX KW . XX OS Tenuivirus zeae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2357 RA Srinivas K.P., Sreenivasulu P.; RT "Maize stripe virus associated with stripe disease of sorghum"; RL Unpublished. XX RN [2] RP 1-2357 RA Srinivas K.P., Sreenivasulu P.; RT ; RL Submitted (13-AUG-2011) to the INSDC. RL Virology, Sri Venkateswara University, Tirupati, Andhra Pradesh 517502, RL India XX DR MD5; 0b2cf7d0ba3fa0a6ab9864e44b011bf6. XX FH Key Location/Qualifiers FH FT source 1..2357 FT /organism="Tenuivirus zeae" FT /segment="RNA3" FT /host="sorghum" FT /isolate="Tirupati" FT /mol_type="genomic RNA" FT /country="India:Chittoor" FT /db_xref="taxon:3052767" FT 5'UTR 1..66 FT gene 67..660 FT /gene="NS3" FT CDS 67..660 FT /codon_start=1 FT /gene="NS3" FT /product="nonstructural protein 3" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:J7FHC5" FT /protein_id="AFO12484.1" FT /translation="MNFYTSSVGVLQYDHSLLVMNDLTNIHVTCEDINCSAKLLCYIYD FT VYKSRYPSMDEHSFLRLLRGPDDAEILSTFLRTIIWILSHDRNFPDEFRIPATALVSAY FT IKYYSELKPRAPTTNCWTCRMSKNNLPFQVPSIKGFPAEAELYIVPISDHDGKTIEFSG FT MKTLYKSPSKKKHNYVISSDMPPLSARYTVWDGK" FT gene complement(1314..2264) FT /gene="CP" FT CDS complement(1314..2264) FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:J7FI44" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:J7FI44" FT /protein_id="AFO12485.1" FT /translation="MATNKPANLNDLQKAINDISKDALKYLTDNKASVTTFHDQIGYAG FT YDAATLIGILKDKGGATLAQDVVKMIVMRYVRGTGFVKDVTKKTKATAGSEEAAALVAR FT YGLVSSVGSNANAITLGRVAQLFPNVSFEVTKQFSGLKMAIDSSDLSMPGTDSLLWDFV FT PQYITLDSSSAPYCTTKSINHILFSIHMIHAFLVTKKTMPETKKKERGLLKDIDMIKYT FT TGLLVITCQSKNLNEAKKKSGRTKVCDPFYVNEKIKESFLALLASFGKNVVCSYGTQVK FT QFLAEQCSLMKIMVDNSSKTQDEMKTAIVEFFEEE" FT 3'UTR 2265..2357 XX SQ Sequence 2357 BP; 708 A; 474 C; 396 G; 779 T; 0 other; acacaaagtc ctgggtaaaa aatattattt tttatcaatt tatatattac ttctgtccat 60 cgaagcatga acttttacac atcatctgtt ggagtgctac agtatgacca ctctttgttg 120 gtcatgaatg atctcaccaa cattcatgtc acttgtgaag atatcaattg ctctgcaaag 180 cttctctgtt acatatatga tgtctacaag tctaggtacc catctatgga tgagcactct 240 tttttgcgcc tactaagggg tccggatgat gcagagatac ttagtacttt cttaaggacc 300 atcatctgga tactatctca tgatagaaac tttccagatg agtttaggat cccagcaaca 360 gcacttgttt ctgcttatat taaatactat tcagagctga agccaagagc tcctacaact 420 aactgttgga cctgcaggat gtcgaaaaac aatctgcctt tccaagttcc ctcaatcaag 480 ggatttcctg ctgaagcaga gctgtatata gttcctatct ctgatcatga tggaaagaca 540 atagagtttt caggaatgaa gacactatat aaatctccaa gcaagaaaaa acataattat 600 gttatttcat cagacatgcc tcctctcagt gctagataca ctgtctggga tggcaaataa 660 gatgaaaatt gtgaaaattt gtctctaggt atcagcggat aatgtaacta agttacattt 720 tttagataaa aaagtgtgct aggcacacta tccgaataat agtcggatga aggccttaac 780 ctaatttttt tgtttttttt tgtttttttg tttttttgtt tttttgtttt ttcatttttt 840 ttgtttttta tgatatataa acaagcataa cacgacataa ggcatgtttt tattaactac 900 attacataca cgcactaata atagtgaaga taagcacaca agaactaaaa cacaacaaaa 960 gcaatacaaa tatataatag acaatgttca atatattaga aaagcattac catactacta 1020 tgattagagc tcatgaattt tcaacaccat catcactaca tgcacacaca aacatttttt 1080 tggtttttca ttttttggtt tttttgtttt tttgattttt ttgatttttt tgttttttaa 1140 ttttttgatt tttttgtttt ttagttttta tcacacacaa caataataca caccaaacaa 1200 cacacacaaa tagaaaacta caatacatag tcaacgcctc agcttcccaa caactgatca 1260 tccttcccaa caaattttct cagtttatgg tgaaatcacc atagcatgga gagtcactcc 1320 tcttcgaaga actcaacgat tgcagtcttc atctcatctt gagttttgga gctgttgtcc 1380 accatgattt tcatcaagct acactgttct gccaagaact gtttgacttg ggtcccatag 1440 gagcaaacaa cattctttcc gaatgatgca agcagagcca agaaagactc cttgattttt 1500 tcattcacat agaatgggtc acacacctta gttctgccag acttcttttt tgcctcattg 1560 aggttcttag actggcaggt gataactagt agaccagtag tatactttat catgtcaatg 1620 tccttgagca gccctctctc tttcttctta gtctctggca ttgttttctt ggtgaccaag 1680 aaagcatgga tcatatgaat actaaagaga atatgattta tactcttagt agtgcaatat 1740 ggcgcagatg agctatcaag tgtgatatac tgagggacaa aatcccacag cagagagtca 1800 gttcccggca tactaagatc agaagaatca attgccatct taagaccaga gaactgtttg 1860 gtgacttcaa aagatacatt tggaaagagt tgagcaactc ttcccaatgt aatagcattc 1920 gcgttgctac ccacagatga cactagtcca tagcgtgcaa ctaaagctgc tgcctcctca 1980 ctgcctgcag ttgctttagt ctttttagtg acatccttga caaaaccagt tcctctgaca 2040 tatctcatca caatcatctt aaccacatcc tgagcaagag tagctccacc tttgtccttg 2100 agaattccaa ttagagtggc cgcatcatat cctgcatatc caatctgatc atgaaaagtg 2160 gtcacagacg ccttgttgtc agtgagatac ttcaaggcat ctttggaaat atcatttata 2220 gctttctgga gatcattaag atttgcaggc ttgttagtgg ccattgctct caaggggatt 2280 ggtgcaatgg ttatgcttta gacctttctt cagttgatca atacgaaatc gattaaacga 2340 ttacccagac tttgtgt 2357 //