ID JN572115; SV 1; linear; genomic RNA; STD; VRL; 7391 BP. XX AC JN572115; XX DT 08-NOV-2011 (Rel. 110, Created) DT 27-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Felipivirus A1 strain 073F polyprotein gene, complete cds. XX KW . XX OS felipivirus A1 OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Ensavirinae; Felipivirus; Felipivirus A. XX RN [1] RP 1-7391 RX PUBMED; 22031936. RA Lau S.K., Woo P.C., Yip C.C., Choi G.K., Wu Y., Bai R., Fan R.Y., Lai K.K., RA Chan K.H., Yuen K.Y.; RT "Identification of a Novel Feline Picornavirus from the Domestic Cat"; RL J. Virol. 86(1):395-405(2012). XX RN [2] RP 1-7391 RA Lau S.K.P., Woo P.C.Y., Yip C.C.Y., Choi G.K.Y., Wu Y., Bai R., Fan R.Y.Y., RA Lai K.K.Y., Chan K.H., Yuen K.Y.; RT ; RL Submitted (11-AUG-2011) to the INSDC. RL Microbiology, The University of Hong Kong, University Pathology Building, RL Queen Mary Hospital, Hong Kong, China XX DR MD5; 9cc834deb373ba6d85c6080930434641. DR EuropePMC; PMC3255865; 22031936. DR EuropePMC; PMC4376133; 25726971. XX FH Key Location/Qualifiers FH FT source 1..7391 FT /organism="felipivirus A1" FT /host="Felis catus" FT /strain="073F" FT /mol_type="genomic RNA" FT /country="Hong Kong" FT /collection_date="24-Aug-2007" FT /db_xref="taxon:2847076" FT 5'UTR 1..299 FT CDS 300..7313 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:G8HH17" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="UniProtKB/TrEMBL:G8HH17" FT /protein_id="AET06137.1" FT /translation="MAFKFTSRNPTTEVYRAHGIFHVFHTQGRTCTYTRVTPSALKQRG FT RAYNVGLAMSTNSTGNKPQVAQAGGNVYQINYYGSDYAVAKGEATTQMDPEKFTRPVAD FT ILASKGTALKSPTVEECGFSDRIMQITSGNSTITTQEAVNAVVAYGCWPSFDSGAGEAI FT DKLTDPGPSVDRFYTLDSIEWSTTTQGYYYNLPGCLTNLGMFGQNCAYHYLMRSGFCVH FT IQVNASKFHQGTLMIVAVPECQFPGEPTAEFGTIPDTLRTEFWKQYPRSQLTIFPHQFI FT NLRTNNSSTLILPYVNATPAENALTHSYWTLLLVPLVPLEYSSGATTRIPVTISIAPMC FT SSFSGLRNRIPLAQGIPTFQVPGSEQFVTTLRNPGYPLYPEYQKTPPHHIPGRVTNLME FT VAEVDTLCNLSDTEVLYINATGSAPLGENLGTWDLSLQGNLLSPTYLGRLSRFYTHYRG FT SINLTFMFCGSAMATGKFLISYTPPGGDAPRTRQDAMLATHVVWDVGLQSSCSLVIPYI FT SQSQYRFSNISGNKLSYDGYITLWYQTAVVTPPNCPNQCALVCFASACKDFEMRLPVDS FT AYFQGLGDDLSKVITSVTKDITQPLMEPVTGTVASLPQQLSLQVGDGSALAAPETGVSA FT TTEPEQMMETRVSTVLYSKYETGVEYFMSRYAKFSQIELKRASVYHDKIPLYFNDTRAT FT QRAIRTKYRMFTYVRCDYDVVLLASTNRVDGSGTENQVNTDHEFKLQAMFCPPGSPQPT FT NFDSPEWACPTNPSIYFRLKAAPASFRIPFMGISSAYASFYNGYSTFTPQAAKYGEFPG FT NYLGDLWVRLVADNSRPGSASTVVVNVQAFCRPVNFEGYLPRPIVSLKPNVRVGPSRGR FT VEFVETGVSMEIGVGPFGADARPCNAGPRRSGLIPDRLERTYEKVWLAHHPKGFTFNVV FT PLHSDIVLIPFHLFSTNLMFSHGAVYHFSEYKPVWMSMTYDVAVLKLEKPTFHCSPPIC FT LHGCRSGWLKCVTREICMSMRVQGFDLDTLEVGETEWVGAHTQRGLISSQGPVPYGSCG FT SPVICEHGVCAITTATNRKQSFFTKMSEIPYFQAMEQGPGDWLAGIFENMGGAFGEGLI FT QPIKDKLDDIRANLTPNTIRSDLTKTTITTLVKIICAMVLISKAYDKVETAALVGTMLG FT VDFLSKDPFEWLKERIAGPQEQGWASDLSNWIKEFNAACTAAKGLEWIGQRLSQFVDWV FT KSFFKKEDRRRTHFIKGLEKLPMLMETFDKISTSRGQYSPETVKRVCTAFRELKRGADI FT YGGERNFATGQILSYYKRAMAMLKSMSSGRIEPVAILIHGGPGKGKSLITETMGRQICK FT VMGSSLPYSLPPDPKYFDGYTQQPVVIMDDVGQNPDGEDLKLFCQMVSSTEFQVPMADL FT EDKGLLFTSPYVLATTNCDRLAPPTIAEPKALERRFVFDLDILLEKDYTDRAGRLAADE FT ALTQCSHPATNFKRCCPLICGKAVKLKDRKSGITYSVDDLLTCLYRESARRQRCGDKLD FT ALFQGIEDEIRMLPDAYRQKMKVKHQIHDGDLGFERVQMVPDPEEWFETDWDKMPHILK FT TIDEQVKEGIIQDKPMPNEVADLLRALRGDEKVVKYCQEQGWILPPDLTQIRVERDVKV FT TIEQVATGLSILASIATLASFIYLAYRMFASRQGPYSGESPAPLKAPVPRRVVVTQGPD FT SEFALKLMSTNLLDVLTAKGHFSGLAVCDTWILLPMHSDPGDVVSVEGKEMDVLERVDL FT NNEQGALELTLIRINRPTKFRDIRKFFPPAFSAERDCTLVVNNKNFPRVMLPVGAVTAF FT GFLSLSFLPRYNTCTYRYPTKMGQCGGVVLKAGKIVAMHIGGDGLNGYGAILTRKHFAF FT MEGAIVSTSQAPRPINLNTKTTLRPSVFYDTFKGEKEPAALHVKDRRLEVDLEKAMFSK FT YKGNLDVEFPPELSLAVDQYVEQIRPLIPPDVTDPLSLEDVVYGIDNLEGLDLNTSAGY FT PYVTMGVRKKDLIPERGQPLGALVEALDLHGYGHPYVTYLKDELRPIEKVKLGKTRLIE FT CSSLNDTIRFKTVFGRFMQVYHRNPGTITGCAVGCNPDEHWSQFYHEFKQEPIMAFDYS FT NYDASLHPIWFDALKMIFRKLGYSENDLGLIDHVCFSKHIYKSTLYEVEGGMPSGCSGT FT SILNSIINNLIIKTLVLRTYKGVDLDQMKILAYGDDVIVTYPFQLDASIVAEEGKLFGL FT IMTPPDKTSTFNETTWDTVTFLKRKFVPDHQFPFLIHPVFPMSEIYESIRWTRNPQQTN FT EHVDSLCRLAWHCGEEEYNDFIAKVRTVPVGRALSLPTYRVLRAFWLDLF" FT mat_peptide 300..449 FT /product="L" FT mat_peptide 450..641 FT /product="VP4" FT mat_peptide 642..1361 FT /product="VP2" FT mat_peptide 1362..2039 FT /product="VP3" FT mat_peptide 2040..2954 FT /product="VP1" FT mat_peptide 2955..3554 FT /product="2A" FT mat_peptide 3555..3863 FT /product="2B" FT mat_peptide 3864..4871 FT /product="2C" FT mat_peptide 4872..5312 FT /product="3A" FT mat_peptide 5313..5381 FT /product="3B" FT mat_peptide 5382..5927 FT /product="3C" FT mat_peptide 5928..7310 FT /product="3D" FT 3'UTR 7314..7391 XX SQ Sequence 7391 BP; 1805 A; 1938 C; 1844 G; 1804 T; 0 other; tggccaccgg ggaagaacgg caattgtgca cctcctctac aacccacgcc gaccctgcct 60 aaccatggca ccagtaggag tgggcccctg tagtgggtca aggtgtgcga cagtcagtgg 120 tagagtagac aatcctgacc gggcaatagg actgcattgc atatccttag gtggtattga 180 gaaacctctg ccacccaccg gcgtggatct ctatgggggg ggccccatag actgggtcta 240 tactgcctga tagggtcgcg gctggtcgac cactgactgt ataaccagtt gtactcaaca 300 tggctttcaa atttacctca cgcaacccga ccactgaagt ttaccgagcc catggaatct 360 tccatgtgtt tcacacgcaa ggacgcactt gcacttatac gcgtgtcact ccaagcgctc 420 tcaaacagag ggggcgcgcg tataatgttg gtctggctat gtccaccaat tcgactggaa 480 acaaacccca agttgcacaa gcaggaggga atgtatatca gattaactac tatggttcag 540 actatgcagt tgccaagggt gaggccacca cgcagatgga tccggagaaa ttcaccaggc 600 ccgtcgcgga cattcttgca tccaaaggga cggcgctgaa atctcctacg gtggaagagt 660 gcgggttttc cgaccgtatt atgcagatca cctctggaaa ttcaaccatc accacccagg 720 aggcagtaaa tgcagtggtc gcgtatggtt gttggccatc atttgactca ggagctgggg 780 aggccataga taagttaact gatccaggtc cctctgtgga caggttctac actctggact 840 caattgagtg gagcaccacc acacaaggct actattataa cctgcctggt tgccttacca 900 accttgggat gtttgggcag aattgcgcat accactactt gatgagatct ggcttctgtg 960 tccacatcca agttaatgcc tctaaattcc accagggcac cctcatgatc gttgctgtgc 1020 cggagtgcca gtttccgggc gaaccaactg cagagtttgg taccatacca gacacgcttc 1080 gcacagagtt ttggaagcag tacccgaggt cccagctcac gatattcccc catcagttta 1140 ttaacctccg cactaataac tcctcgaccc tgattctgcc ctacgtcaac gccaccccgg 1200 ccgagaatgc ccttacacat agctattgga ccctacttct agttcccctg gttcctctcg 1260 agtatagttc aggggctaca actcggattc ccgtgactat atcaattgcc cctatgtgct 1320 catcattttc tggcctgagg aaccggatac cccttgctca aggtattcca acattccaag 1380 taccgggatc cgagcaattt gtcactaccc tccgcaatcc tggttaccca ctgtacccgg 1440 agtaccagaa gacaccaccc catcatatac caggtagggt aacaaatttg atggaggtgg 1500 cggaggtgga cactttatgc aatctatcag atactgaggt gttgtacatc aatgcaacag 1560 ggtctgcacc attgggcgag aacctgggca cctgggatct ttcattacag ggtaatttat 1620 tatcccccac ctacctcggt cgcctgtcga gattctatac ccattataga ggctctatca 1680 acttgacttt catgttctgt ggctcagcca tggccacggg aaagttcctc atctcctata 1740 ctcctcccgg gggggacgcc cctcggacgc ggcaggatgc catgctggcc acccatgtcg 1800 tatgggacgt tggtctccag tcaagttgct cattggtgat cccatatata tcccaatccc 1860 aatatagatt ctcgaacata tctgggaata aactgtctta tgatgggtat atcaccctgt 1920 ggtaccagac cgccgttgtc accccaccaa attgtcccaa tcagtgtgcg cttgtttgtt 1980 tcgcttctgc ctgcaaggac tttgagatga gattgcctgt tgattcagcc tatttccaag 2040 gactaggtga tgacctttcg aaggtgataa caagtgtcac gaaggacatc acccaaccac 2100 ttatggagcc ggtaactggt actgtggcgt cactaccaca acagctctca ctgcaggtgg 2160 gtgacggctc ggctctcgca gcacctgaga ctggggtctc ggcgactact gagccggagc 2220 agatgatgga gacgagggtt tcaacagtgc tatacagcaa gtatgagaca ggagtggaat 2280 acttcatgtc tagatatgcc aaatttagcc agattgaatt gaagagggcc tctgtgtacc 2340 atgataagat accactgtac ttcaacgata cgcgggctac tcagcgcgct atcaggacca 2400 agtaccggat gttcacatac gtgcgttgtg actatgatgt tgtccttctt gccagcacca 2460 acagggtgga tgggtctggc acagagaacc aggtaaacac agaccatgag ttcaagttgc 2520 aggccatgtt ctgtccaccc ggctcaccac agcctaccaa ctttgattca cccgagtggg 2580 cctgtcctac aaatccctct atctacttcc gcctcaaggc tgccccagcc tcctttagaa 2640 taccctttat gggcatctcg tccgcttatg cctccttcta caatggttac tccactttca 2700 caccacaagc tgcaaaatat ggcgaatttc cagggaacta cctgggtgat ctgtgggtgc 2760 gccttgttgc tgataattca cgtcctggta gtgcatccac ggtggtggtc aatgtccagg 2820 cattctgccg gccagtcaat tttgagggct acctacctcg ccctatagtt tcactcaagc 2880 ctaatgtcag ggtggggccc tccagggggc gtgttgaatt cgttgagaca ggtgtctcca 2940 tggagattgg ggtcggccct tttggtgctg acgcgcgacc ctgtaatgct ggccctcgca 3000 ggagtggctt aatacctgac cgcctggaac ggacctatga gaaagtttgg ctcgcgcacc 3060 accccaaagg ttttacgttc aatgtcgtcc cgctacatag tgacattgtc ctcataccgt 3120 ttcacctgtt ctcaacaaac ctcatgtttt ctcatggcgc tgtgtaccac ttctccgagt 3180 acaaaccagt gtggatgtcc atgacttatg acgttgcagt cttgaagcta gagaaaccta 3240 ccttccattg tagccccccc atctgtctac atggttgtag atcaggatgg ctcaagtgtg 3300 tgactaggga gatatgcatg tccatgcggg tccagggctt cgacctggac actctggagg 3360 ttggagaaac tgaatgggtg ggtgcccaca cccaacgggg cctaatctcc tcgcaggggc 3420 ccgtgcccta tggttcctgt gggtcccctg tgatatgtga gcatggagta tgcgctataa 3480 ccacagcgac caacaggaaa cagtccttct ttaccaagat gtctgagata ccgtattttc 3540 aggcgatgga gcagggccct ggtgattggc tagcgggcat ctttgaaaat atggggggtg 3600 cttttggtga ggggctcata caaccaatta aggacaaact ggatgacatc cgggccaacc 3660 tcacgcccaa taccatacgg agtgacctta ccaagaccac gatcaccacc cttgtaaaga 3720 ttatctgcgc catggtcctc atatccaagg cctacgacaa ggtggagacc gcagcccttg 3780 tgggtacaat gttaggcgtt gatttcctct ctaaagaccc atttgagtgg ctaaaagaaa 3840 ggatcgcggg accccaggaa cagggctggg catcagatct ctccaactgg atcaaagagt 3900 tcaacgccgc gtgcaccgct gcaaagggtt tggagtggat tggccagagg cttagccagt 3960 ttgtggactg ggttaaatcc ttctttaaga aagaggatag gagacggacc cacttcatca 4020 agggcctgga gaagctaccc atgcttatgg agacctttga taagatttcc acctcccgtg 4080 gacagtacag tccggaaacc gtcaagcgtg tttgcaccgc tttccgtgag ttgaagcgtg 4140 gggctgacat ttatggtggt gagaggaatt tcgccaccgg acagatcctt tcctactaca 4200 agagggccat ggcaatgctt aagtctatgt cgtcggggcg gatagaacca gtggccattc 4260 tcatccacgg agggcctgga aagggtaagt cactcatcac agagaccatg ggccgccaaa 4320 tttgcaaagt aatgggctct tctctcccgt attccctccc ccccgaccca aagtattttg 4380 atgggtacac ccagcagcca gttgtgatta tggacgatgt tggacagaac cctgatgggg 4440 aagatctcaa actcttctgt cagatggtat ccagcacgga atttcaggtc cccatggcag 4500 atctggagga taaaggcctt ttattcacct ctccatacgt tcttgcaacg acaaattgtg 4560 atcgtctggc ccccccaaca atcgccgagc ctaaggccct tgagcggagg ttcgtttttg 4620 acctggatat tctcctggag aaggactaca ctgaccgtgc gggccgtctt gcggctgatg 4680 aggccctcac tcaatgttcc catcctgcga ccaacttcaa gaggtgctgc ccacttatat 4740 gtggaaaggc cgtgaaactg aaagatcgga agtcaggtat cacctactcc gttgatgacc 4800 ttctcacctg cctctatagg gagtcagcgc gtcgtcagag gtgtggggat aagctagacg 4860 ctcttttcca gggtattgaa gatgaaatca ggatgctgcc agacgcttac agacaaaaga 4920 tgaaggtaaa acatcagatc catgatggtg acctagggtt tgagcgtgta cagatggtcc 4980 ctgacccaga ggagtggttc gaaactgatt gggataagat gcctcatatc ctgaagacga 5040 tcgacgagca ggtgaaggag gggatcatcc aggataaacc catgcctaat gaagtggctg 5100 atctgcttag ggccttacgt ggtgatgaaa aggttgtcaa gtactgtcag gaacaagggt 5160 ggatccttcc tcctgatcta acccagatca gagtggagcg agatgtcaag gtcaccatag 5220 aacaggtggc aacgggacta tcaatcctag cgagtatcgc aaccctcgcc tccttcatat 5280 atttagccta taggatgttt gcctctaggc agggtcctta ttcaggagaa tcacccgccc 5340 ccctcaaggc accagttccc cgtagggttg tggtaaccca aggtcctgac tctgagtttg 5400 ccttgaagct catgtccacc aacctgctcg atgttcttac cgccaaggga cacttctctg 5460 ggctcgcagt gtgtgacact tggatattac ttcccatgca ttcagatccc ggtgatgtag 5520 tttcggtgga aggcaaggaa atggacgtgc tagagagagt ggacctgaac aatgagcaag 5580 gtgctctcga actcaccttg atcagaatca accgtcccac caaattcaga gatattagga 5640 aattcttccc ccctgccttt tcagcggaga gagactgcac acttgttgtg aataacaaga 5700 acttccctag ggtgatgctc cccgtgggtg cagtcacggc cttcggcttc ctgtctctct 5760 cctttctccc acggtataac acctgcacct accgctaccc cacgaagatg gggcagtgtg 5820 ggggtgtagt gctcaaagcc gggaagatag tggccatgca tataggaggg gatggcctaa 5880 atggctacgg tgccatactc acacgcaagc acttcgcgtt tatggagggg gccattgtgt 5940 ccacatctca ggccccaagg cctatcaacc tcaacacaaa gaccacccta aggccgtccg 6000 tgttctacga cacctttaaa ggggagaaag aacctgcagc cctacatgtc aaggacagac 6060 gcctcgaggt agaccttgag aaggccatgt tctcaaagta caagggcaac cttgacgttg 6120 agttcccacc agagctgtcc ctggctgtgg accaatacgt tgagcagatc agaccattga 6180 tacccccgga tgtgactgac cccctatcct tggaggacgt tgtttatggc attgacaacc 6240 tcgagggact tgatttgaac acgtcagctg ggtatcccta tgtcaccatg ggtgtgagga 6300 agaaggatct catccctgag cgaggccaac ccctaggcgc attggtagaa gccctagacc 6360 tacatggcta tggacaccca tatgtgacct acctaaagga tgagctacgc cctatagaga 6420 aggtgaaact agggaagacc cggttgatcg agtgtagcag cctcaacgat acaatcagat 6480 tcaagacagt ctttggtaga ttcatgcaag tttaccaccg taaccctgga accatcaccg 6540 gctgtgcggt tggctgtaac ccagatgagc attggtcaca gttctaccat gagtttaaac 6600 aggagccaat tatggcattc gattatagta actatgatgc atccctccac cccatttggt 6660 ttgacgcgct caagatgata ttccggaaat tggggtattc agagaacgat ttgggattga 6720 ttgatcatgt gtgcttttcg aagcatattt acaaatctac tctatatgag gtggagggtg 6780 gcatgccatc ggggtgttct ggcacgtcca tcttgaattc gataatcaac aacctcatta 6840 tcaagaccct ggtacttagg acttacaaag gtgtggatct ggaccaaatg aagatcctag 6900 cctacgggga tgacgttata gtgacctacc ccttccagct ggatgcatcg atagtggcag 6960 aggaagggaa actctttggt ctcatcatga ctcctccaga caagacctcc accttcaatg 7020 agaccacttg ggacaccgtc acatttctca aaaggaagtt tgtaccagac caccaattcc 7080 ccttcttaat ccatcccgtt tttcctatgt ctgaaatata tgagtcgata cgctggactc 7140 gcaaccctca gcaaaccaat gaacatgtgg attcgctttg tcgtttagcc tggcattgtg 7200 gagaagagga atataatgac ttcattgcca aggtgcgcac tgtacctgta gggagggctt 7260 tgtcattgcc cacctaccgc gtgctgcgcg cattttggct tgatctattt tgatccccat 7320 caatactcaa ctaccagtcc aatcataggc taatactgat agttgaagac atttaattga 7380 gattggcaat t 7391 //