ID JN572081; SV 1; linear; viral cRNA; STD; VRL; 4540 BP. XX AC JN572081; XX DT 07-FEB-2012 (Rel. 111, Created) DT 18-APR-2012 (Rel. 112, Last updated, Version 3) XX DE Wyeomyia virus strain original polyprotein gene, complete cds. XX KW . XX OS Orthobunyavirus wyeomyiae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-4540 RX PUBMED; 22278828. RA Chowdhary R., Street C., Travassos da Rosa A., Nunes M., Tee K.K., RA Hutchison S.K., Vasconcelos P.F., Tesh R., Lipkin W.I., Briese T.; RT "Genetic characterization of the Wyeomyia group of orthobunyaviruses and RT their phylogenetic relationships"; RL J. Gen. Virol. 93(5):1023-1034(2012). XX RN [2] RP 1-4540 RA Chowdhary R., Briese T.; RT ; RL Submitted (10-AUG-2011) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 West 168th RL Street, New York, NY 10032, USA XX DR MD5; 7f482ad1f4297d11069380cb7e8bda41. DR EuropePMC; PMC3838119; 24067954. XX CC GenBank Accession Numbers JN572080-JN572082 represent sequences CC from the 3 segments of Wyeomyia virus strain original. XX FH Key Location/Qualifiers FH FT source 1..4540 FT /organism="Orthobunyavirus wyeomyiae" FT /segment="M" FT /strain="original" FT /mol_type="viral cRNA" FT /country="Colombia" FT /collection_date="1940" FT /db_xref="taxon:3052456" FT CDS 21..4274 FT /codon_start=1 FT /product="polyprotein" FT /note="contains G2, NSm, and G1" FT /db_xref="GOA:H6U340" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR005168" FT /db_xref="InterPro:IPR014413" FT /db_xref="InterPro:IPR026400" FT /db_xref="UniProtKB/TrEMBL:H6U340" FT /protein_id="AEZ35274.1" FT /translation="MEAFYFLMFIMVSNATPVFQRCFTGGQLIVEKKSQTSVSEFCLKD FT DVSILKSVIDYEKENNTIVGHNKIYRQWVVADWKLCHPIKTEGGSISVIEVDKDLTIKS FT NAYVCTTDCTITIDKENAQVIFQTARLNHFEVTGTTMSTGWFKTKASVSLDQTCEHIKV FT SCGKKSLQFHACFRQHMACVRFLHRSLLPGSMANSICQNIELIIILVLTLCIFIILNII FT AKTYICYLMLPLYIPFAYFYGWLYNKSCKICTNCGLAYHPFTNCGSICVCGTVFQTSDR FT MRMHREGGMCKGYKSLIMARILCKAKTSSLCISIITSLLILSFVTPIEGSEAKLYSLSD FT LPDAYTKEIQRLENKIHNIFIISIINISITFVLFLVAVFSHLVVNKIVNRKVFLCKECD FT MYHSLTKIRYNGDFCNKCGTCTCGTQEDPNYTTMHKVTEQCLSEFKRNTQKKMMVLFIF FT LVLIENSICIASAEEKCFKEKSFTTDCIGPLITIKPCSKTTMVEVGKKLVTEKQIANED FT IEKLKLIPNGPMQAWEMIDNQETYGQTFLMEYAFLKRECSYFEEFEHNSGVNQILWKTI FT AKTEHFDICAIRPNQRFCKCMLESVYCKDTNWDFANEINDTYTGKPTFYRHDIVLFTKI FT FKAAFHGTTARIYDILMGKQNKTELTKLFKSLQKRFPYNNLMVGFLKFGELLIGLPLLG FT TIPKATLGRTTTQRADRTYIQLGNAKIGEPNPNCKDLKIIHCISPRFNVPVGSVVKCGE FT SDIKIYDFHTPVYKSTSDERTWCKYDKHCFHNWMPIDNERLTSLKSLNCWYSDPSENQD FT IYSVDKKSCRMSNKGVCTIAANQYPVLQCDDNVVYYTDHKSSADTQGDIGEYCFSQNCA FT HTRYPINTDTGILCTWEYNTVKPQYLQKISLKTLEEYKRALQDKLSHSLELYHFQPTAN FT FPHIKPTYKYITAGGVESTDGIEGAYILTELPAVSGSTVGLNVIAKDETNLMDLIIFIK FT SATIKATYNHIYDTGPTININVKHDELCTGSCPSTIPHAEQWLTFSQERTSKWGCEEFG FT CLAIGEGCVYGSCQDVIKKEMRVYRKATDEINEVVVCIIFTNKDYCTKLNALEPQITSM FT IDLQLEGLDTKTLPNILSLKNHKLYSGQINDLGSFSQMCGNVQQVNKTIYGAGQVKFDY FT LCHGAKRKDIIVRKCYNNNYGSCNLLNEEKALIVEDNYNTINILHTRHNLGTLKIKVTL FT GDIRYKLFTSKLELEVDAKCVGCIGCFSNFDCEFKIESTIDTTCPVVGPCPFFHNNIFI FT SSTSNRYSMKMICKDKPDQNSELTICGKKYPLLIDTVKKDEKIEINVGDQTSYIQEKDN FT QCKTWLCKVWDEGIGVIFEPLKRLLGSYFNIAIIVGCVLVALAIAIYILLPMLMKLRDI FT LKENEEAYKREMKLK" XX SQ Sequence 4540 BP; 1743 A; 657 C; 805 G; 1335 T; 0 other; actgtttaga acactacaaa atggaggctt tttacttctt gatgtttatt atggtcagta 60 atgcaacacc tgtttttcag agatgtttta ctggtgggca gttaattgta gaaaagaaat 120 cacagacatc agtatctgaa ttctgcttga aagatgatgt ttcaatattg aaatcagtta 180 ttgactatga aaaggaaaat aatacaattg tcggacataa taaaatatat aggcagtggg 240 tagttgcaga ttggaaattg tgtcatccaa ttaagacaga aggtggaagt ataagtgtta 300 tagaagttga taaggattta actataaagt caaatgctta tgtctgcaca actgattgca 360 caataactat agacaaagaa aatgcacaag tgattttcca aactgctaga ttgaatcact 420 ttgaagttac tgggacaact atgagcacag gatggttcaa aactaaagca tcagtttcat 480 tagaccagac atgtgaacat ataaaagtat cttgtggaaa aaaatctcta caattccatg 540 cttgtttccg acaacatatg gcttgtgtta ggttcttaca tagaagtttg cttccagggt 600 ctatggccaa ttccatatgt caaaatatag aattgataat tatactagtt ttgacattat 660 gtatatttat aatattaaat ataattgcaa aaacatatat atgttattta atgcttcccc 720 tatatattcc atttgcatat ttctacggtt ggctctataa taaaagttgc aagatttgca 780 caaactgcgg cttggcatac caccctttca caaattgtgg atcaatttgt gtatgtggta 840 ctgtgttcca aacatcagat agaatgcgga tgcatagaga aggaggaatg tgcaaaggtt 900 acaaatccct aattatggct agaatcttat gtaaagcaaa aacatcatct ttgtgcatct 960 caatcattac atcattgtta atactgtcat ttgttacccc gattgaagga tcagaagcca 1020 aattatatag cttgtcagat ttgccagatg cttacacaaa agaaattcaa aggttggaaa 1080 ataaaataca taacatattc ataatttcca taataaatat atcaataaca tttgtactct 1140 tcctagttgc agttttctca catttagtag ttaataaaat tgtaaataga aaagtctttt 1200 tatgtaaaga atgtgatatg tatcattctc taactaaaat aagatacaat ggagattttt 1260 gcaacaaatg tggaacatgc acatgtggga cacaagaaga ccccaactat acaacaatgc 1320 ataaggttac agagcaatgt ctgtctgagt ttaagagaaa tacacagaaa aaaatgatgg 1380 ttttatttat ctttttagtt ttaatagaga attcgatttg tatagcatca gctgaagaga 1440 agtgttttaa agaaaaaagt tttacaacag attgcattgg cccactgatc actataaagc 1500 catgctcaaa aacaactatg gtagaagtag gcaaaaaact agttacagaa aaacaaatag 1560 ctaatgaaga tatagaaaag cttaaattaa taccaaatgg tccaatgcaa gcttgggaga 1620 tgattgataa tcaagaaact tatggccaaa catttttgat ggaatatgca tttcttaaaa 1680 gggaatgttc ttattttgaa gaatttgaac ataacagtgg ggtaaaccaa atactatgga 1740 agacaatagc aaaaacagaa cattttgata tttgtgctat aagaccaaat caaagattct 1800 gcaaatgcat gctagaatct gtctactgta aagatacaaa ctgggacttt gcaaatgaga 1860 taaatgacac atatactggg aaacctactt tttatagaca tgacattgtt ttgtttacaa 1920 aaatatttaa ggcggctttc catggtacta cagcaaggat ttatgatata ctgatgggaa 1980 agcagaacaa gacagaactt acaaaactct ttaaaagctt acaaaaaaga tttccatata 2040 ataatttaat ggtagggttt ttaaaatttg gagaattgct tataggttta cctctgctgg 2100 gtacaatccc caaggctacg ttggggagaa caacaacaca acgagcagac agaacttata 2160 tacagttagg taacgctaaa ataggagaac caaatcctaa ttgtaaggat cttaagataa 2220 tacattgtat aagtccacgt tttaatgttc ctgttgggag tgttgtgaaa tgtggtgaaa 2280 gtgatatcaa aatatatgat ttccatactc ctgtttacaa atccacatca gatgagagaa 2340 catggtgtaa atatgataag cattgtttcc ataattggat gcccattgat aatgaaaggt 2400 taacatcatt gaagagttta aattgctggt atagtgatcc aagtgaaaat caagatatat 2460 attctgtaga taaaaagtct tgcagaatgt caaacaaagg tgtatgtaca atagctgcaa 2520 atcaatatcc agtattgcaa tgtgatgaca atgttgtgta ttatacagac cataagtcta 2580 gtgcagatac acaaggggat attggggaat attgtttttc acaaaattgt gctcatacta 2640 gatatcccat taacacagac acagggatat tatgtacttg ggaatataac actgtaaaac 2700 cgcaatattt acagaaaata tctttaaaaa cgctagaaga atataaaagg gcattacaag 2760 acaaattaag tcatagttta gaactttatc atttccagcc cactgcaaac tttccccaca 2820 ttaaaccaac ttataaatat atcactgctg gtggagttga aagcactgat ggtatagaag 2880 gggcttatat tttgactgaa cttccagcag tctcaggatc cacagtaggc ctaaatgtta 2940 tagctaaaga tgaaacaaat ctaatggacc taataatatt tattaaaagt gccactataa 3000 aagcaactta taatcatata tatgacacag gaccaactat aaatataaat gttaaacatg 3060 atgaattatg tactggatct tgtccaagca ctatccctca tgcagaacag tggctaactt 3120 tttcacaaga gagaactagc aaatggggat gtgaggaatt tggttgctta gctattggag 3180 aaggatgtgt atatggatca tgccaagatg tcattaaaaa agaaatgaga gtatatagga 3240 aagctacaga tgaaattaat gaagttgttg tatgtattat attcacaaat aaagattact 3300 gtacaaaatt gaatgctttg gaaccacaaa taacatcaat gatagatctg cagttagaag 3360 gtttagatac aaaaacatta ccaaatatct tgtctcttaa gaaccataag ctgtatagtg 3420 gccaaatcaa tgatttagga tcatttagcc aaatgtgtgg gaatgtccaa caagttaata 3480 aaacaattta tggtgcagga caagtgaaat ttgattactt atgtcacgga gctaaaagga 3540 aagatattat tgttagaaaa tgttataata acaattacgg atcttgcaac ttgctaaatg 3600 aagaaaaagc attaattgtt gaagataatt ataatacaat taacatactt cacacaaggc 3660 ataatctagg gacattgaag ataaaagtga ctcttggaga tattaggtat aaactcttta 3720 caagtaaatt ggaattagaa gtggacgcaa agtgtgtagg ctgtattgga tgctttagta 3780 atttcgattg tgaattcaaa attgaaagca caatagacac aacatgccct gttgttggac 3840 cgtgcccatt ttttcataat aatattttca tcagctctac aagcaacaga tattctatga 3900 agatgatttg taaagataaa ccagatcaaa attcagagct caccatctgt gggaaaaaat 3960 atccattgtt aattgacaca gtgaaaaaag atgaaaaaat tgagataaat gttggagacc 4020 agactagtta tatacaagaa aaagacaatc agtgtaagac ctggctgtgc aaggtctggg 4080 acgaagggat aggagtaata tttgaaccat taaaaagatt acttggaagc tactttaaca 4140 ttgcaataat agtaggctgt gtcttagttg cactagccat tgccatatat atattattac 4200 caatgctgat gaagcttaga gatatactta aagaaaatga agaggcatat aagcgtgaaa 4260 tgaaattaaa gtagccaaat tagttttcat ttaagaataa atatgttcca ataataaaca 4320 aagtaagtca aacaaccaaa ataatgaata aacaaacaaa atcaacaaaa ataaaataag 4380 aacaaagtca aatacaaaat aaaacaaaaa caacaacaaa accaaataaa tcagtaattg 4440 gcatcccatt gccaactaca acagcagttg aggtagcaat gcacaattaa atcattaata 4500 tattatactg tagatatcta tagattggta gcacactact 4540 //