ID JN564749; SV 1; circular; genomic DNA; STD; VRL; 2540 BP. XX AC JN564749; XX DT 08-JAN-2012 (Rel. 111, Created) DT 01-JUN-2012 (Rel. 113, Last updated, Version 3) XX DE Tomato dwarf leaf virus isolate AR:Pichanal:397 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato dwarf leaf virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2540 RX DOI; 10.1007/s00705-012-1355-2. RX PUBMED; 22718220. RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT "Tomato dwarf leaf virus, a New World begomovirus infecting tomato in RT Argentina"; RL Arch. Virol. 157(10):1975-1980(2012). XX RN [2] RP 1-2540 RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT ; RL Submitted (08-AUG-2011) to the INSDC. RL Instituto de Patologia Vegetal, INTA-CIAP, Camino 60 Cuadras Km 5 1/2, RL Cordoba, Cordoba X5020ICA, Argentina XX DR MD5; 1b24f51e7b5f4d4155490390c8157f98. XX FH Key Location/Qualifiers FH FT source 1..2540 FT /organism="Tomato dwarf leaf virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="AR:Pichanal:397" FT /mol_type="genomic DNA" FT /country="Argentina" FT /collection_date="2008" FT /db_xref="taxon:1195378" FT gene 143..829 FT /gene="AV1" FT CDS 143..829 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:H2D710" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H2D710" FT /protein_id="AEX10553.1" FT /translation="MPKRDAPWRLMAGTTKVSRSTNYSPGGANSKRDAWVNRPMYRKPR FT IYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRYQVLHKFYAKVTGGQYASNEQALVKRFWRVNNYVVYNHQEAGKYENHTENALFIVY FT GMYTCL" FT gene complement(884..1282) FT /gene="AC3" FT CDS complement(884..1282) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:H2D711" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H2D711" FT /protein_id="AEX10554.1" FT /translation="MDLRTGEFITAPQAANGVFIWEITNPLYFKIIDVEDPSYTTTRIY FT HVQIRFNHSLRRALGLHKAFLNFQVWTTSVTASGMTYLSRFKYLVLLYVNQLGVISLNN FT VIRAVRYATDRYYVNYVLENHDIKFKLY" FT gene complement(1029..1418) FT /gene="AC2" FT CDS complement(1029..1418) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /note="TrAP" FT /db_xref="GOA:H2D712" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H2D712" FT /protein_id="AEX10555.1" FT /translation="MLNSSSSTPPSIKAQHRAAKRRATRRRRIDLNCGCTIYVHIGCCN FT HGFTHRGIHHCASSSEWRLYLGDYKSPVFQDNRRGGPVIHNNQDIPRPDTVQPQPAEST FT GSPQGISQFPSLDDISDSFWDDIFK" FT gene complement(1360..2418) FT /gene="AC1" FT CDS complement(1360..2418) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /note="Rep" FT /db_xref="GOA:H2D713" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2D713" FT /protein_id="AEX10551.1" FT /translation="MPSAPKRFRISSKNYFITYPHCSLSKEEALSQLQKINTPTNKKYI FT KICRELHENGEPHLHVLIQFEGKFVCTNQRLFDMVSPTRSTHFHPNIQGAKSSSDVKSY FT IDKDGDTLEWGEFQIDGRSARGGCQSANDAAAEALNAPSKETAMQIIREKLPEKYLFQF FT HNLNSNLDRIFSKAPEPWVPPFRLSSFTNVPDEMQEWADAYFGMDSAARPERPISIIIE FT GDSRTGKTMWARALGPHNYLSGHLDFNSKVYSNTVQYNVIDDVSPHYLKMKHWKELIGA FT QRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKQENASLKAWTLHNAKFIFL FT NSPLYQSTAQSS" FT gene complement(2001..2264) FT /gene="AC4" FT CDS complement(2001..2264) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H2D714" FT /protein_id="AEX10552.1" FT /translation="MKMGNLISMCLFSSKESSSARISDSSTWYPQQDQHISIRTFRELN FT HRLTSSPTSTRTGILSNGENFRSTDEVLEEVASQLMTLPQRL" XX SQ Sequence 2540 BP; 679 A; 508 C; 571 G; 782 T; 0 other; accggatggc cgcgcgattt tttgtagtgg tccccgcacg actgaccaat cagatttcgt 60 cctgaaagcc tagatatttt gaaatactta ggcgctaagt tctataaatt gaataacttc 120 tttttacagg ctttaattca aaatgcctaa gcgtgatgcc ccatggcgtt taatggcggg 180 gaccactaag gtttcccgct ccaccaatta ttcacctggt ggggctaatt ccaagcgtga 240 tgcttgggtt aataggccca tgtataggaa gcctcgaata tatcgtacgt tgagagggcc 300 tgatgttccc aaagggtgtg aaggcccatg caaggtccag tcttatgaac agcgacatga 360 catctctcat gttggcaagg tcatgtgtat ttccgatatt acccgtggta atggtataac 420 tcaccgtgtt ggtaagcgtt tttgtgttaa gtctgtgtac attttaggga agatatggat 480 ggatgagaat atcaagttga agaaccacac caacagcgtc atgttctggt tagttagaga 540 tcgtagaccg tatgggacac ctatggattt tggtcaagtg tttaatatgt ttgacaatga 600 gcctagcact gctactgtta agaacgatct ccgtgaccgt tatcaagttc tacacaagtt 660 ctacgctaag gtgaccggtg gtcagtatgc gagcaacgag caagctctcg tgaagcgttt 720 ctggagggtt aacaactatg tggtctacaa ccatcaggaa gctggcaaat atgagaatca 780 cactgagaac gctctgttta ttgtatatgg catgtacaca tgcctctaat cccgtgtatg 840 ctacattgaa aattcggatc tatttttatg attcgataac aaattaataa agtttgaatt 900 ttatatcatg attttcaagt acataattta cataatatct gtctgttgca taacgaacag 960 ctctaattac attattaaga gaaattacac ctaattgatt tacatacaat aagactaaat 1020 atttgaatct acttaaatat gtcatcccag aagctgtcac tgatgtcgtc cagacttgga 1080 aattgagaaa tgccttgtgg agacccagtg ctctccgcag gctgtggttg aaccgtatct 1140 ggacgtggta tatcctggtt gttgtgtatg acgggtcctc cacgtcgatt atcttgaaat 1200 acaggggatt tgtaatctcc caaataaaga cgccattcgc tgcttgaggc gcagtgatga 1260 attccccggt gcgtaaatcc atggttgcag caaccgatgt gtacgtaaat agtgcagcca 1320 cagtttaggt ctatgcgtct tcgtctagtt gctctccgtt tagctgctct gtgctgtgct 1380 ttgatagagg ggggagttga ggaagatgaa tttagcatta tgaagagtcc acgccttcag 1440 agatgcattt tcttgtttgt ctaggaagtc tttataacta gccccctctc ctggattgca 1500 cagcacgatt gatgggatcc ctcctttaat ttgaacaggc tttccgtatt tacagttgga 1560 ctgccagtcc ctttgggccc caatcaactc tttccaatgt ttcatcttta gataatgcgg 1620 actgacatca tcaatgacgt tatattgaac agtatttgaa tatactttag aattaaaatc 1680 aagatgtccg ctcaaataat tatgtgggcc tagtgcacga gcccacatcg tcttccctgt 1740 tcgactatct ccttcaatga taatactaat aggtctttct ggccgcgcag cggaatccat 1800 accaaaataa gcatcagccc attcttgcat ctcgtcaggg acattagtga atgaggagag 1860 tcgaaacgga ggaacccacg gctccggagc cttactgaaa attctatcta aattagaatt 1920 taaattatga aattgaaata agtatttctc tgggagtttc tcccttatta tttgcatagc 1980 cgtttcttta gatggggcgt tcagagcctc tgcggcagcg tcattagctg actggcaacc 2040 tcctctagca cttcgtccgt cgatctgaaa ttctccccat tcgagagtat ccccgtcctt 2100 gtcgatgtag gacttgacgt cagacgatga tttagctccc tgaatgttcg gatggaaatg 2160 tgttgatctt gttggggata ccatgtcgaa gagtcgctga ttcgtgcaga cgaactttcc 2220 ttcgaactga ataagcacat ggagatgagg ttccccattt tcatggagtt ctctacagat 2280 tttaatgtat ttcttgtttg ttggagtatt tattttctgt aattgagaaa gagcttcttc 2340 ttttgagaga gaacaatgag gatatgtgat gaagtaattc tttgaagaaa tgcgaaagcg 2400 ttttggagca gatggcattt ttgaaataat aagggtgtca ccaattgagc tctcgcttca 2460 aaagtctgat aaattggtga cattggtgac aatatataga agttcctaga gggcacgtgg 2520 cggccatccg ttataatatt 2540 //