ID JN419002; SV 1; circular; genomic DNA; STD; VRL; 2675 BP. XX AC JN419002; XX DT 20-MAR-2012 (Rel. 112, Created) DT 20-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Centrosema yellow spot virus isolate BR:Car1:09 segment DNA-A, complete DE sequence. XX KW . XX OS Centrosema yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2675 RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P., RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.; RT "Species diversity, phylogeny and genetic variability of begomovirus RT populations infecting leguminous weeds in northeastern Brazil"; RL Plant Pathol. 0:0(2011). XX RN [2] RP 1-2675 RA Silva S.J.C., Castillo-Urquiza G.P., Hora B.T.Jr., Assuncao I.P., RA Lima G.S.A., Pio-Ribeiro G., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (31-JUL-2011) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; c89fa1874e5aa0dafb6c0f35a138cf3a. XX FH Key Location/Qualifiers FH FT source 1..2675 FT /organism="Centrosema yellow spot virus" FT /segment="DNA-A" FT /host="Centrosema brasilianum" FT /isolate="BR:Car1:09" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="06-Nov-2009" FT /db_xref="taxon:1129032" FT CDS 222..986 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:H8ZQM9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H8ZQM9" FT /protein_id="AFD54476.1" FT /translation="MSKRDGSWRSMAGISKVSRSLNFSPRGGIGPMGPKYNRASAWVNR FT PMYRKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDIAHTGKVLCISDVTRGSGITHRVG FT KRFCVKSVYILGKIWMDDNIKLKNHTNNVMFWLVRDRRPYGTPMDFGQVFNLYDNEPST FT ATVKNDLRDRFQVMHKFNATVTGGQYAAKEQALVKRFWKVNNHVTYNHQEAAKYENHTE FT NALLLYMACTHASNPVYATLKIRIYFYDSISN" FT CDS complement(983..1381) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:H8ZQN0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H8ZQN0" FT /protein_id="AFD54477.1" FT /translation="MDSRTGELITAPQAENGAYIWEITNPLYFKITRVEDPIYTNTRVY FT HIQIRFNHNLRRALDLHKAFLNFQVWTTSQTVSGTTYLNRFKHFVLLYLDRLGVISINN FT VIRAVRFATNRSYVSAVLENHSIKFKLY" FT CDS complement(1128..1541) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:H8ZQN1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H8ZQN1" FT /protein_id="AFD54478.1" FT /translation="MRNSSSSTPPSIKPQHRAAKRRATRRRRIDLDCGCTVYIHINCRN FT SISSLSINHGFTHRGTHHCASGREWRVYLGDNKSPLFQDNQGRRPHIHQHQSLPHPDTV FT QPQPAESVGSPQGIPQFPSLDDFTDSFWDDLFK" FT CDS complement(1462..2541) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:H8ZQN2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H8ZQN2" FT /protein_id="AFD54475.1" FT /translation="MPSAPKRFRLQAKNIFLTYPQCSISKEAALSQLQTLSLPSNKKYI FT KICRELHEDGQPHLHVLIQLEGKAQITNQRLFDLVSPTRSAHFHPNIQGAKSSSDVKSY FT IDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEAINAPSKQAAMQIIREKLPEKFLFQY FT HNLSSNLDRIFSKAPNPWVPPFPLSSFTNVPQDMQEWADDYFGRGAAARPERPISIIVE FT GDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEAEYNVIDDVTPQYLKLKHWKELIGA FT QKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKYFLDKEENASLRAWTLHNAKFIFL FT DSPLYQTTTQSSQAQGNSS" FT CDS complement(2124..2381) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8ZQN3" FT /protein_id="AFD54479.1" FT /translation="MGNLISTCLSNSKAKHRSQIRDCSTWYPQPGQHISIQTFRELNHR FT PTSSPTSTRTEILSNGVNSRSTADLLEEVSRLLTTLPQRQ" XX SQ Sequence 2675 BP; 652 A; 564 C; 667 G; 792 T; 0 other; accggatggc cgcgcgattt tttgtggccc ccccccccgc tcgcgccagt tgcggcgcgt 60 tgtcggcttt gccgtgtggg tccacaatca atgagggagc gtcctgaaag cttggttatt 120 taaaatgact tggagggtaa gttagtaatt ttgtataaat taggacccca catagtggtc 180 tcgtcagtgt ttgggcgaga ctccccacac tttaattcag aatgtctaag cgggatggct 240 cgtggcgctc gatggcggga atctccaagg ttagccgctc tctcaatttc tcacctcgtg 300 gaggtattgg gcctatgggg cccaaatata atagagcctc tgcttgggtt aataggccca 360 tgtataggaa gcccagaata tataggatgt atagatcgcc cgatgttccc aaagggtgtg 420 aagggccgtg caaggtccag tcttatgaac agcgccacga tatcgcccat actgggaagg 480 tgctgtgcat ttccgacgtg actcgtggta gcggtattac tcaccgtgtc ggtaagcgct 540 tctgtgtgaa gtccgtgtat attttaggta agatatggat ggatgacaac atcaagttga 600 agaaccacac caacaatgtc atgttctggc tggttagaga tcggagacca tatggtactc 660 ctatggattt cggtcaggtg ttcaaccttt atgacaatga gcccagtacc gccaccgtga 720 agaatgatct ccgcgatcgt tttcaagtga tgcacaagtt caacgctacg gtcacgggtg 780 gtcagtatgc tgcgaaggag caggctttgg tgaagcgttt ttggaaggtg aacaaccatg 840 tgacgtataa ccaccaggaa gctgcgaagt acgagaatca cactgagaac gccctattat 900 tgtatatggc atgtacacat gcctctaacc ccgtgtatgc aacccttaag attcggatct 960 atttttatga ttcgatttct aattaataaa gtttaaattt tattgaatga ttttcgagta 1020 cagcacttac atatgatctg tttgttgcga agcgaacagc tctaattaca ttgttaatgg 1080 aaataacgcc taatctatct aaatacaata acacaaaatg tttaaatcta tttaaataag 1140 tcgtcccaga aactgtctgt gaagtcgtcc agacttggaa attgaggaat gccttgtgga 1200 gatccaacgc tctccgcagg ttgtggttga accgtatctg gatgtggtag actctggtgt 1260 tggtgtatat ggggtcttct accctggtta tcttgaaata gaggggattt gttatctccc 1320 agatatacgc gccattctct gcctgaggcg cagtgatgag ttcccctgtg cgtgaatcca 1380 tggttaatcg ataagcttga tatcgaattc ctgcagttga tgtggatgta tacggtgcac 1440 ccgcagtcga ggtctatgcg tctacgacga gttgccctgc gcttggctgc tctgtgttgt 1500 ggtttgatag aggggggagt cgaggaagat gaatttcgca ttatggagtg tccacgctct 1560 tagagatgca ttttcctctt tgtcgaggaa atatttataa ctggccccct ctcctggatt 1620 acatagcaca attgatggga tacctccttt aatttgaact ggcttcccgt atttgcagtt 1680 gctttgccag tctttctggg ccccaatgag ctctttccag tgctttagct ttagatattg 1740 cggagtgaca tcatcaatga cgttatattc cgcttcattt gaataaaccc tagaattgaa 1800 atccagatgt ccactcaaat aattatgtgg gcccaatgca cgagcccaca tcgtcttccc 1860 cgttcgacta tcaccctcga cgatgatact aataggtctc tccggccgcg cagcggcacc 1920 tcttccaaaa taatcatcag cccattcttg catatcttgt gggacgttag tgaatgagga 1980 gagtggaaac ggaggaaccc atggattcgg agccttacta aatatcctgt ccagattact 2040 ggacagattg tgatactgga agagaaactt ctccggaagt ttctctcgga ttatttgcat 2100 cgcagcttgt ttgctgggtg catttattgc ctctgcggca gcgtcgttag cagtctgctg 2160 acctcctcta gcagatctgc cgtcgatctg gaattcaccc cattcgagag tatctccgtc 2220 cttgtcgatg taggacttga cgtcggacga tgatttagct ccctgaatgt ttggatggaa 2280 atgtgctgac ctggttgggg ataccaagtc gaacaatctc tgatttgtga tctgtgcttt 2340 gccttcgagt tggataagca cgtggagatg aggttgccca tcttcgtgta actctcggca 2400 gattttgatg tatttcttat ttgatggaag agatagggtt tgtaattggg aaagtgctgc 2460 ttctttcgaa atagagcact gtggatatgt gagaaatata tttttggctt gaagcctaaa 2520 tcttttagga gctgatggca ttttatgtaa ataagagtgt gtactctaat tgagctctct 2580 ctcaaaaatg catatgaatt ggagtattgg agtgcaatat atagtagaag ttcctaaggg 2640 ctcaggaaca cgtggcggcc atccgttata atatt 2675 //