ID   JN416776; SV 1; linear; genomic RNA; STD; VRL; 1951 BP.
XX
AC   JN416776;
XX
DT   28-SEP-2011 (Rel. 110, Created)
DT   04-MAY-2012 (Rel. 112, Last updated, Version 3)
XX
DE   Prunus necrotic ringspot virus isolate Pch12 segment RNA3, complete
DE   sequence.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1951
RX   PUBMED; 22327390.
RA   Cui H., Hong N., Wang G., Wang A.;
RT   "Molecular characterization of two prunus necrotic ringspot virus isolates
RT   from Canada";
RL   Arch. Virol. 157(5):999-1001(2012).
XX
RN   [2]
RP   1-1951
RA   Cui H., Hong N., Wang G., Wang A.;
RT   ;
RL   Submitted (02-AUG-2011) to the INSDC.
RL   Southern Crp Protection and Food Research Centre, Agriculture and Agri-Food
RL   Canada, 1391 Sandford Street, London, Ontario N5V 4T3, Canada
XX
DR   MD5; 38a8bca6b55feb26f37eff8295260233.
DR   EuropePMC; PMC5316922; 27565765.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1951
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="peach"
FT                   /isolate="Pch12"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collected_by="Hongguang Cui"
FT                   /collection_date="May-2011"
FT                   /identified_by="Hongguang Cui"
FT                   /db_xref="taxon:37733"
FT   5'UTR           1..175
FT   CDS             176..1027
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:B2KN98"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:B2KN98"
FT                   /protein_id="AEP04412.1"
FT                   /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMKALPTK
FT                   GCHILHLVNLPKSNILRLASKEQKGFLSRQADKVKKKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC
FT                   DIAPENIEVKRLGDSRKVLTIQPKAPIVEEIKDDVEPLGSNGENHMEEKTVTVKVGSSG
FT                   SA"
FT   CDS             1103..1783
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B2KND0"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:B2KND0"
FT                   /protein_id="AEP04413.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNDALVPLRAQQRAANNPNRNRNP
FT                   NRVSSGIGPAVRPQPVVKTTWTVRGPNVPPRIPKGYVAHNHREVTTTEAVKYLSIDFTT
FT                   TLPQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVDQPDGPNALSRKGFLKDQPRGWQ
FT                   FEPPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDED
FT                   LLEI"
FT   3'UTR           1784..1951
XX
SQ   Sequence 1951 BP; 520 A; 393 C; 510 G; 528 T; 0 other;
     gtttttacaa attgaaatcg taacatccag taattggttg atttctcttt tacttgacta        60
     ggtaccattg aaacgaatta aaagtcctat ttctctagta acatcccctt tgtgggttta       120
     gagattgttg gttgtctatt cgtaattcca cttgttggtt gaatagtgtt tcagtatggc       180
     cggtgtcagt aaaaacccct ccactagtga tttttcagta gtggagtgtt ctatggacga       240
     aatgagccag atatcagagg atttgcacaa acttatgctg tccgatgaga tgaaggcgtt       300
     accaacgaaa ggttgtcata tcctgcattt ggttaacctc ccgaaatcca atatattgag       360
     attagcgagt aaggagcaga aaggtttcct ctcgcgacag gccgataaag taaagaagaa       420
     aatttacaga tgtgtaggcc gagtattcct cgtttatgta ccgattattc aggcaacgac       480
     ctcgggtctg ataaccctta agttgcaaaa ctccgataca ggagagattt cagacgtcgt       540
     gacagacgtc gaagccaacc gcgcctttgt tattatggac agatggggaa gatccctggt       600
     ggaatcagca gatttaaatc tgttgtattc catttcatgt ccggacgtcc gacctggagc       660
     cagagtggga gagatgatgg ctttttggga cgagaggatg tcaaggcagc agacttactt       720
     ggagaaaggg aatcctattt tattcccgat tgccgagaca aaaccttcga aatatcttaa       780
     tgataagaag gtgttgatgt ctatggtccg aagtaggata ttggcaggta cagaagggtg       840
     cgatatagct cccgagaata tagaagtcaa acgattaggg gatagtagga aggttttgac       900
     cattcaaccg aaagccccga ttgtagagga aattaaggac gatgttgaac cgttaggttc       960
     gaatggtgaa aatcatatgg aagagaagac cgtgaccgtt aaggtcggta gttctggaag      1020
     tgcttgagtg actatgtcac gagcgtgcgc tttgcgcgag cgtttttctt tcttttcttc      1080
     cgaacatctt tttcatttga taatggtttg ccgaatttgc aatcataccc acgctggtgg      1140
     atgccgttct tgcaagaagt gccatccgaa tgatgctctg gtcccactca gggctcaaca      1200
     aagggctgcg aataacccga ataggaatag gaacccgaat agggtttcga gcggtatagg      1260
     acctgcggtc cgaccgcaac cggtcgtgaa gaccacttgg accgtgaggg gtccgaatgt      1320
     gcctccccga attcccaagg gttatgtggc acataatcac cgagaggtga cgacgacaga      1380
     ggcagtgaag tacttgagca ttgacttcac gaccactctc cctcagttga tgggtcagaa      1440
     tttgacctta ttaaccgtta tagtccgaat gaactctatg agttcgaatg gttggattgg      1500
     gatggtggag gactataagg tggatcaacc tgatggtccg aatgccctgt ctaggaaggg      1560
     gttcttaaag gaccaaccga gaggttggca gttcgaacct ccctccgatt tagatttcga      1620
     cacttttgcg cgtacgcatc gtgtcgtcat cgaattcaag accgaagtgc ccgctggggc      1680
     caaggtcttg gttagggatt tgtacgtagt ggtaagtgac ttaccacgag tgcaaattcc      1740
     gaccgatgtc ttgctggtcg atgaagacct gcttgagatc tagagtgaga taagcacact      1800
     cgaatgtctc cgaatggaaa gttcgtacca ccgatagtgg atattgcgaa atagatttct      1860
     gaaagtcgct tcccggcttt catgcttgga aatcttacct gcgttagcag atgcccacaa      1920
     cgtgaagttg tggatgcccc gttagggaag c                                     1951
//