ID   JN416773; SV 1; linear; genomic RNA; STD; VRL; 1943 BP.
XX
AC   JN416773;
XX
DT   28-SEP-2011 (Rel. 110, Created)
DT   04-MAY-2012 (Rel. 112, Last updated, Version 3)
XX
DE   Prunus necrotic ringspot virus isolate Chr3 segment RNA3, complete
DE   sequence.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-1943
RX   PUBMED; 22327390.
RA   Cui H., Hong N., Wang G., Wang A.;
RT   "Molecular characterization of two prunus necrotic ringspot virus isolates
RT   from Canada";
RL   Arch. Virol. 157(5):999-1001(2012).
XX
RN   [2]
RP   1-1943
RA   Cui H., Hong N., Wang G., Wang A.;
RT   ;
RL   Submitted (02-AUG-2011) to the INSDC.
RL   Southern Crp Protection and Food Research Centre, Agriculture and Agri-Food
RL   Canada, 1391 Sandford Street, London, Ontario N5V 4T3, Canada
XX
DR   MD5; 8ccdc297d85e937d9f5f3f2728a2258d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1943
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="cherry"
FT                   /isolate="Chr3"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collected_by="Hongguang Cui"
FT                   /collection_date="May-2011"
FT                   /identified_by="Hongguang Cui"
FT                   /db_xref="taxon:37733"
FT   5'UTR           1..173
FT   CDS             174..1025
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:O71130"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:O71130"
FT                   /protein_id="AEP04408.1"
FT                   /translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMRALPTK
FT                   GCHILHLVNLPKSNVLRLASKEQKGFLSRQADKVKNKIYRCVGRVFLVYVPIIQATTSG
FT                   LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYSISCPDVRPGAR
FT                   VGEMMAFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC
FT                   DIAPENIEVKRLGDNRKVLTIQPKAPIVEEVKDEDEPTGSNGENHMEEKTVTVKVGSSG
FT                   SA"
FT   CDS             1100..1774
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YKE6"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YKE6"
FT                   /protein_id="AEP04409.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNGALVPLRAQQRAANNPNRNPNR
FT                   ASSGTGPVVRPQPVVKTTWTVRGPNVPPRIPKGFVAHNHREVTTTEAVKYLSIDFTTTL
FT                   PQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVEQPDGPNALSRKGFLKDQPRGWQFE
FT                   PPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDEDLL
FT                   EI"
FT   3'UTR           1775..1943
XX
SQ   Sequence 1943 BP; 520 A; 394 C; 506 G; 523 T; 0 other;
     gtttttacaa ttgaaatcgt aacatccagc aattggttga tttctctttt gcttgactag        60
     gtaccattga aacgaattaa aagtcctatt tctctagtaa catccccttg tgggtttaga       120
     gattgttggt tgtctattcg taattccact tgttggttga atagtgtttc agtatggccg       180
     gtgtcagtaa aaacccctcc actagtgatt tttcagtagt ggagtgttct atggacgaaa       240
     tgagccagat atcagaggat ttgcataaac ttatgctatc cgatgagatg agggcgttac       300
     caacgaaagg ttgtcatatc ctacatttag ttaacctccc gaaatccaat gtactaagat       360
     tagcgagtaa ggaacagaaa ggttttctct cgcgacaggc cgacaaagta aagaataaga       420
     tttacagatg tgtaggccga gtattcctcg tttatgtacc gattattcag gcaacgactt       480
     cgggcttaat aacccttaag ttgcagaact ccgatacagg agaaatttca gacgtcgtga       540
     cagacgtcga agccaatcgt gcctttgtta ttatggacag atggggaaga tccctggtag       600
     agtcagcaga cttgaatctg ttgtattcta tttcatgtcc ggacgtccga cctggagcca       660
     gagtgggaga gatgatggct ttttgggatg agaggatgtc gaggcagcag acttacttgg       720
     agaaagggaa tcctatttta ttcccgattg ctgagacaaa accttcgaaa tatcttaatg       780
     ataagaaggt tttgatgtcg atggtccgaa gtaggatatt ggcaggtaca gaagggtgcg       840
     acatagcccc cgagaatata gaagttaaac gattagggga caatagaaag gttttgacca       900
     ttcaaccgaa agccccgatt gtagaggaag ttaaggacga agatgaaccg acaggttcga       960
     atggtgaaaa tcatatggaa gagaagactg tgaccgttaa ggtcggtagt tctggaagtg      1020
     cttgagtgac tgtgtcacga gcgagcgcct ttgcgcgagc gtttttcttt ctttcttccg      1080
     aatttccttt cacctaacaa tggtttgccg aatttgcaat catacccacg ctggtggatg      1140
     ccgttcttgc aagaagtgcc atccgaatgg agctctggtc ccactcaggg ctcaacagag      1200
     ggctgcgaat aacccgaata gaaacccgaa tagggcttcg agtggtactg gaccagtggt      1260
     ccgaccacaa ccggtcgtga agaccacctg gaccgtgaga ggtccgaatg tgcctccccg      1320
     aattcctaag gggtttgtag cacacaatca ccgagaggtg acgacgacag aggcagtgaa      1380
     gtacttgagc atagacttca cgaccactct ccctcagttg atgggtcaga atttgaccct      1440
     actgactgtt atagtccgaa tgaactctat gagttcgaat ggttggattg ggatggtgga      1500
     ggactataag gtggaacaac ctgatggtcc gaatgccctg tctaggaagg ggttcttgaa      1560
     ggaccaaccg agaggttggc agttcgaacc tccttccgat ttagatttcg acacttttgc      1620
     gcgtacgcat cgtgtcgtta tcgaattcaa gaccgaagtg cccgctgggg ccaaggtctt      1680
     ggttagggat ttgtacgtag tggtaagtga tttaccacga gtgcaaattc cgactgatgt      1740
     cttgctggtc gatgaagacc tgcttgagat ctagagtgag ataagcacac tcgatttttc      1800
     tccgaatgga aagttcgcac caccgatagt ggatattgcg aattagattt ctgaaggtcg      1860
     cttcccgact ttcatgcttg gaaatcttac ctgcgttagc agatgcccac aacgtgaagt      1920
     tgtggatgcc ccgttaggga agc                                              1943
//