ID JN416772; SV 1; linear; genomic RNA; STD; VRL; 2591 BP. XX AC JN416772; XX DT 28-SEP-2011 (Rel. 110, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 3) XX DE Prunus necrotic ringspot virus isolate Chr3 segment RNA2, complete DE sequence. XX KW . XX OS Prunus necrotic ringspot virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2591 RX PUBMED; 22327390. RA Cui H., Hong N., Wang G., Wang A.; RT "Molecular characterization of two prunus necrotic ringspot virus isolates RT from Canada"; RL Arch. Virol. 157(5):999-1001(2012). XX RN [2] RP 1-2591 RA Cui H., Hong N., Wang G., Wang A.; RT ; RL Submitted (02-AUG-2011) to the INSDC. RL Southern Crp Protection and Food Research Centre, Agriculture and Agri-Food RL Canada, 1391 Sandford Street, London, Ontario N5V 4T3, Canada XX DR MD5; 1d15fb7590db9220ad511d65b5f697c7. XX FH Key Location/Qualifiers FH FT source 1..2591 FT /organism="Prunus necrotic ringspot virus" FT /segment="RNA2" FT /host="cherry" FT /isolate="Chr3" FT /mol_type="genomic RNA" FT /country="Canada" FT /collected_by="Hongguang Cui" FT /collection_date="May-2011" FT /identified_by="Hongguang Cui" FT /db_xref="taxon:37733" FT 5'UTR 1..26 FT CDS 27..2426 FT /codon_start=1 FT /product="replicase P2" FT /db_xref="GOA:G5CZ64" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:G5CZ64" FT /protein_id="AEP04407.1" FT /translation="MNPLNQLLSHGCSAISSALHGDVAYTQISDECFDSHFTQISTEHF FT LTTSARKLFEAYMVTMFLKKHMSYVFENFIGSEMGPYVQTRWRIIFDLDEVEEEYVYKP FT DFYHYDIYDYEMGVDIPASIMDDIPFCEDAEAVTCRNCGSFDEIETVYQAATSSDESCA FT NVCDVDAPHDTIKWSDEPDLTVDDPSKLHDLDDEVPQLQLETVGRVVQSVEPLVPDINS FT FETNQLHLVKEVVLDRFESILECHEKVLARNDWKSLAMYVPTDEIPSVSDILEIPVNHT FT QPEFIQMAIDEMLPGVSDLDDRFFQEIVETSDINLEIDRASIDMSVFNDWTPKSGRLNG FT LFQTGNISKRVPTFREASLAIKKRNLNVPDLQQVLHEDDEARFIANKFINTVIDPNKLA FT QFPGYISEGEMGYFNKYLSGKTVPDDAFVDPCALVSMDKYRHMIKTQLKPVEDTSQLFE FT RPLAATITYHDKGKVMSTSPIFLMMCNRLLLCLNDKISIPSGKHHQLFSLDPFAFEMTK FT EFKEIDFSKFDKSQQRLHHLIQFHIFTALGAPKDFLDMWFGSHEISHIRDGPCGIGFSV FT NYQRRTGDACTYLGNTIITLSALAYMYDLLDPNVTFVIASGDDSLIGSIKPLDRSEEFK FT FVTLFNFEAKFPHNQPFVCSKFLCLLPTVSGGKKVLAVPNALKLNIKLGVKDLAPCVFD FT AWYKSWLDLIWYFDNYLVVSTMKDYISHRYLRRRTCYQEGAMLAYRTIFSSKEKCLKSL FT FGITSKDLEAMLPMSKNGRGSNRAECSKNNKTFRPPKSTRCRNSAN" FT 3'UTR 2427..2591 XX SQ Sequence 2591 BP; 717 A; 479 C; 620 G; 775 T; 0 other; gtttttgtac tcgtggttga gttacaatga atcctctaaa tcagctattg tcacatgggt 60 gttctgctat ttcctcagct ttacatggag atgttgctta cacccagatt tctgatgagt 120 gttttgattc tcatttcact cagatttcca ccgaacactt tcttactact tccgctagga 180 aattgtttga agcgtacatg gtgacgatgt ttcttaagaa gcatatgagt tatgtcttcg 240 agaactttat aggatccgag atgggtccgt atgttcagac cagatggcgg atcatttttg 300 atctggacga ggtcgaagaa gaatatgtct acaaacccga cttctatcat tacgatattt 360 atgattacga aatgggtgtg gatatacctg catcgataat ggacgatatt ccattctgtg 420 aagatgcaga agcagtgacg tgtcgcaatt gtggtagttt cgatgagata gaaacggtgt 480 accaagctgc gacgtcttct gacgagtcat gtgccaacgt ttgtgatgtt gatgcccctc 540 acgataccat caagtggtct gacgaacctg acttgacggt agatgaccca tcgaagttgc 600 acgatttgga cgatgaagtt ccgcagttgc aattagagac tgttggtcgg gtagtgcagt 660 ccgtggagcc tttggtcccg gacattaact cgttcgagac gaatcagttg cacttagtga 720 aggaagtggt attggacaga tttgagtcca tacttgaatg tcacgaaaag gtattggcta 780 gaaacgattg gaagtctcta gctatgtatg taccgactga tgagattcca tcagttagtg 840 acatattgga aattccggta aaccacacgc aaccggagtt cattcaaatg gcaatagatg 900 agatgttgcc aggagtttca gatcttgatg ataggttttt ccaagaaata gttgaaacgt 960 ctgacattaa tctggagata gacagagcgt ctatcgatat gtcagtgttc aacgactgga 1020 ctccgaagtc gggtagactg aatggactgt tccaaacagg taatatctcg aaaagagtac 1080 cgactttccg cgaagcgtct ctcgctataa agaagcggaa tttgaatgtc cctgatttgc 1140 agcaagtttt gcatgaggac gatgaagcta gatttatagc taataagttc ataaacaccg 1200 ttatcgatcc gaataaattg gctcagtttc cagggtatat atccgaaggt gaaatgggtt 1260 atttcaataa gtatctgtca gggaaaaccg tacccgatga tgcttttgtg gatccatgtg 1320 cgttggtctc gatggacaag tatcgacata tgattaagac acaacttaaa cctgtcgaag 1380 atacgtctca attgttcgag agacctttag cggcaactat cacttatcat gacaaaggaa 1440 aggttatgtc aacatcaccg atattcctga tgatgtgtaa tcgtttgctg ctgtgtttga 1500 acgataagat ttctattcct tcgggaaaac atcatcagtt gttctcgttg gatccctttg 1560 cgtttgaaat gacgaaagag tttaaagaga ttgatttctc gaaattcgat aagtctcagc 1620 aaaggttaca tcacctgatt caatttcaca ttttcaccgc tttaggtgct ccgaaagatt 1680 tcctcgatat gtggtttgga tcacacgaga tatcgcacat ccgtgatgga ccttgtggta 1740 tcggatttag tgtgaattac cagaggcgta cgggagatgc atgcacgtat ttgggtaata 1800 ctatcattac tctgtctgcc ctggcgtaca tgtatgactt gctggatccg aacgtgacgt 1860 ttgtcatagc ttcaggagac gatagtctta taggttcaat taaacctctg gaccgatcgg 1920 aagagtttaa atttgtcacg ttgttcaatt ttgaagcgaa atttccacat aaccaacctt 1980 ttgtgtgcag taaattttta tgtttactgc ctactgtgag tgggggaaag aaggttctgg 2040 cagttccgaa cgctttaaag ttgaatataa aactaggtgt taaggatcta gcaccatgtg 2100 tttttgatgc ttggtataaa tcctggttgg atttaatttg gtacttcgac aattacctgg 2160 ttgtgtcgac catgaaagac tatatcagcc ataggtattt aagaagacgg acatgttacc 2220 aagaaggtgc gatgttggct tataggacga tattctcgag taaagagaaa tgtttgaagt 2280 ccttgtttgg tatcacctcc aaagatctgg aagcgatgtt gcccatgagt aagaatggga 2340 gaggctctaa tagagccgag tgttcaaaga ataacaaaac atttagacct ccgaagagta 2400 ctagatgtag gaattctgcg aactagaacg agttgaacgc gttcgaattt cctcgaatag 2460 agaagaatcg taccaccgtg tgggtttgcg attagttcct agagagttgc ttccggctct 2520 cgagttcata ggtacttacc tgctttgcag atgcctacga cgtgaagtcg tagatgcccc 2580 gatagggaag c 2591 //