ID JN411688; SV 1; circular; genomic DNA; STD; VRL; 2601 BP. XX AC JN411688; XX DT 18-OCT-2011 (Rel. 110, Created) DT 02-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE Sida yellow mottle virus strain Cuba:Sancti Spiritus159-1:2009 segment DE DNA-B, complete sequence. XX KW . XX OS Sida yellow mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2601 RX DOI; 10.1007/s00705-011-1123-8. RX PUBMED; 21964921. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Begomoviruses infecting weeds in Cuba: increased host range and a novel RT virus infecting Sida rhombifolia"; RL Arch. Virol. 157(1):141-146(2012). XX RN [2] RP 1-2601 RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT ; RL Submitted (31-JUL-2011) to the INSDC. RL Fruticultura Subtropical y Fitopatologia, Instituto de Hortofruticultura RL Subtropical y Mediterranea 'La Mayora', Estacion Experimental La Mayora, RL Algarrobo-Costa, Malaga 29750, Spain XX DR MD5; 56a1e0c28f7b01423fb38a680867b650. XX FH Key Location/Qualifiers FH FT source 1..2601 FT /organism="Sida yellow mottle virus" FT /segment="DNA-B" FT /host="Sida rhombifolia" FT /strain="Cuba:Sancti Spiritus159-1:2009" FT /isolate="159-1" FT /mol_type="genomic DNA" FT /country="Cuba" FT /collected_by="E. Fiallo-Olive" FT /collection_date="May-2009" FT /db_xref="taxon:1093958" FT gene 404..1174 FT /gene="BV1" FT CDS 404..1174 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shutting protein" FT /db_xref="GOA:G5CV26" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:G5CV26" FT /protein_id="AEQ38980.1" FT /translation="MYPVKSKRGSFYYQRRFTSRNTVYNRSASTKRHDGKRRGGNSAKP FT NDEPKMSAQRIHENQYGPGYVMAHNSAVSSFITYPSLGKSDSSRSRSYIKLKRLRFKGT FT VKIERVQSEVNMDGSAPKVEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARINSHGNLS FT IAPSLKDRFYIRHVFKRVLSVEKDTLMVDVEGSTSLSNRRYNCWSTFKDLECDSCKGVY FT ANVSKNALLIYYCWMSDTPAKASSFVSFDLDYIG" FT gene complement(1236..2117) FT /gene="BC1" FT CDS complement(1236..2117) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:G5CV27" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:G5CV27" FT /protein_id="AEQ38981.1" FT /translation="MDSQLVNPPSAFNYIESHRDEYQLSHDLTDIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQALWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVGYGKWERKPIRCASMSRLGLRGPIEIRPGESWASRSTIGTAQSDAD FT SEVDNELHPYRHLNRLGTSVLDPGESASIVGAQRAESNITMSMGQLNELVRTTVQECIN FT SNCQPSQAKSLK" XX SQ Sequence 2601 BP; 645 A; 574 C; 634 G; 748 T; 0 other; accggatggc cgcgctttgg tgtccccccc cccctcccgt ggtggcgcac tctcacgctc 60 ccctccctgg tgccgtgctc acacgcgctc tctcattggt gcgggtcctt caccttccgt 120 cttttcgact gtcctttaat ttgaattaaa ggaaatggct ttctcgcgcg acttgctttt 180 attatttgaa ttattgtcgc gagattagtg agtatggccc attgtacctg gtgaaggacg 240 tggctaactt tggaccaagc tgctgagttt atttccgagt gatggtgaat taacagtcta 300 tatagtgggc tgatcaggta tgtattgttt attgtactca gctgccctcc cacgtttaca 360 tcgtcagcta taattgtgtt taatcctcaa ttattgtttg atcatgtatc ctgttaagag 420 taaacgtggt tctttttatt accagcgacg atttacgtca cgtaacactg tgtataaccg 480 ctcagcgtct accaagagac atgatgggaa acgtcgagga ggtaattctg ctaagcccaa 540 cgatgagccc aagatgtcag cccaacgcat acatgagaat cagtatgggc caggttatgt 600 tatggcccat aattcagctg tctcgtcgtt catcacttat cccagcttgg gcaagtcgga 660 ctccagccga agcaggtcct atatcaagtt gaaacgtctc cgttttaaag ggactgtgaa 720 gatcgaacgg gtacaatcgg aagtgaacat ggacggttcc gctccgaagg tcgaaggagt 780 attctcgctt gttgttgttg ttgatcgtaa accacacttg ggtccctctg gatgtctgca 840 tacattcgac gagctattcg gggcaaggat caacagtcat ggcaacctca gcattgcccc 900 atctctgaag gaccgattct acataagaca cgtgttcaaa cgtgtactgt cggttgagaa 960 ggacacgctc atggtggatg tggaagggtc cacatcactc tctaacaggc gatacaactg 1020 ttggtccacg tttaaagacc ttgaatgtga ttcatgcaag ggagtctatg ccaacgtcag 1080 caagaacgcc ttgttaattt attattgctg gatgtctgat acgcctgcaa aggcatcctc 1140 atttgtatct ttcgatcttg attatatcgg ttaactcaat aaattgtgtt tatctaaaga 1200 tgattatcgt aatatgtgaa atggaaagat aacatttatt tcaatgattt ggcctgagaa 1260 ggctgacaat tactattgat acattcttgg accgttgtcc gaacaagctc gttcaactgg 1320 cccattgaca ttgtaatgtt ggactccgct ctctgggctc ccacgatgga ggcagactct 1380 ccaggatcca ggacgctggt ccccagcctg tttagatgtc tgtatggatg gagttcgtta 1440 tccacctccg agtccgcatc tgactgggcc gtgcctattg tactcctgga agcccatgat 1500 tcacctggcc tgatctcaat tgggccacgt aacccaagtc tggacatgga cgcacatctg 1560 atgggcttcc tttcccattt cccataaccc acatgggaaa agtccacatc tttgtccgtg 1620 aactgtttgg acaagatctt cactgttggt gcccggaacg ggatgtcgac ggagtgtttc 1680 gctgtggaca atttcagctt ccctttgaac ttggcgaagt gggtccgctg atgaacattc 1740 gtatcgcaca ccctgtagta caacttccat ggaattgggt cctttaacga gaagaacgaa 1800 gccgagaagt agtggagatc tatgttgcat ctgatcggaa atgtccataa cgcctgtaac 1860 gactcgttgt ccgtcatcct tttgtcgtgg atctccacaa ttaccgtccc tgtggcgttg 1920 atcggcacct gttgcctata ttcaatgacg cagtggtcga tcttcatgca gctacggctg 1980 agcctagctg tcaactgaga cgccgtggaa gggaattgca atattatatc agttaggtca 2040 tgggaaagct gatactcgtc ccggtgagat tctatgtaat tgaaggcact tggaggatta 2100 actaactgag aatccatatg aagaagagag gccgcgcagc ggaaccgatt gctgaggttg 2160 aatcgggaag aagatgaaca accgatgaac aagaagaaca agttatgaac aggtactgtg 2220 atctcgaaga aggtaaagtg tttcttttct ttctgtgttt gagaatgctc gttgatctta 2280 atcttatgct tacgaatatg gaagacgaga aagttgttca ggaattatgt ttttgagaaa 2340 gaaaagaggg ttgattaaga gatagtagat ttctggaaat gaaagaggtt gtttatgaac 2400 ccagagcgtc tgggttgatg ggtatttaaa ttgggaaagt gttcatcaac cgatggcatt 2460 attgtaataa gagggggtac cccaattgga gtctctccaa acttgctcta tcaattgggg 2520 tctggggtct catttatact aggagcctct atagaactct caatctggtt cgcacacgtg 2580 gcggccatcc gctataatat t 2601 //