ID JN400241; SV 1; linear; genomic RNA; STD; VRL; 2984 BP. XX AC JN400241; XX DT 30-AUG-2011 (Rel. 109, Created) DT 24-FEB-2012 (Rel. 111, Last updated, Version 3) XX DE Phytophthora infestans RNA virus 4 isolate FLa2005, complete genome. XX KW . XX OS Phytophthora infestans RNA virus 4 OC Viruses; Riboviria; Narnaviridae; unclassified Narnaviridae. XX RN [1] RP 1-2984 RX DOI; 10.1007/s00705-011-1126-5. RX PUBMED; 21971871. RA Cai G., Myers K., Fry W.E., Hillman B.I.; RT "A member of the virus family Narnaviridae from the plant pathogenic RT oomycete Phytophthora infestans"; RL Arch. Virol. 157(1):165-169(2012). XX RN [2] RP 1-2984 RA Cai G., Myers K., Fry W.E., Hillman B.I.; RT "A member of the virus family Narnaviridae from the plant pathogenic RT oomycete Phytophthora infestans"; RL Unpublished. XX RN [3] RP 1-2984 RA Cai G., Myers K., Fry W.E., Hillman B.I.; RT ; RL Submitted (27-JUL-2011) to the INSDC. RL Plant Biology and Pathology, Rutgers University, 59 Dudley Rd, New RL Brunswick, NJ 08901, USA XX DR MD5; 82b2c8a3f3df59fe7a2e10ab7d3d52e4. XX FH Key Location/Qualifiers FH FT source 1..2984 FT /organism="Phytophthora infestans RNA virus 4" FT /host="Phytophthora infestans" FT /isolate="FLa2005" FT /mol_type="genomic RNA" FT /country="USA:Florida" FT /isolation_source="infected tomato" FT /collection_date="2005" FT /db_xref="taxon:1077832" FT CDS 43..2931 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:G3LIT8" FT /db_xref="UniProtKB/TrEMBL:G3LIT8" FT /protein_id="AEM89291.1" FT /translation="MQEDLILVQPDTDWVGGVNRSWRSLLPVLNGVEYILPRGSLVGLK FT LHGRSTLPQSWERGDRYHSDLLKRDLMIRLTRDLGLSGRHADRLVNRPAIHLKRIEEFI FT SGLVDSFWLGDPRTFALGSPDFKTFRTIVRKIFAVGTSNLGMLMTNWKEWTNWFTHSVC FT ETELREEAKLSNHNMFHRLARLSVVQKALSGDVPLMELGSIVAHLTSTRQMPYMGLPTE FT VKAKADFIEIISTPFHVEPSHHRQMVQCAARMGRLCMSLRNGVPVSDRSSHFSATSSGE FT LDHSLTRGGQAQALKDAIDKWLIPASGSTYMEDTPFGVAEHREGVPLWKTLFVDQETQL FT ELIFSDFGDSLDWIKDVPGRVYGLDDYTGRQILYVAWKEMEDIPHIRASTVPELGNKAR FT IVTLSAFWLNVLQAPLSHIMKEVLKYHPSCFASFTRGDQAWHAASGLGRLNPRSVAGYS FT VLSSDLKNATNAQHIALTRDMLRAFIYSSGLVVSEAYVNLVLDTICPRLVELDGEFTLS FT CRGIMMGEAIAKPSLTLLNLVVEELAFLKYENKLVLLNTDKAAPSRRWRCYHVGGDDHL FT AVGPDQYLDLITHNHELSGSIISPDKHGKSRKMVKYCERVLLVQNLQYNTPDRKPFEHG FT LIVDSIKVRLLEKGQSTLIAKDNKNVAVGKSQQLVKSLDWLPKQLYSKGFIRSIQHLFI FT KRMGSLLPNRNRDEEAFHSVCLPKILGGYGLGLAEDLLTHLSKSKPEIQQTVSAVLYGI FT ETRRARNILSRLNTTISDRSIQGTKWYEDEMVQQFREYPDMVGAIDGREMRRRFPASTY FT QESKAHAASAGWLPIDQLARRVTRGHLFGELMSGGAKRQNVFKTRNWIQEFTRLRKRLE FT EEVGYLPLPEYADLEVKTLRNALGAMTTDLFIDSRQVTSFDKGVGDDSFDFFDGELLRT FT YEAHQPNLVVGLQFIGLDSTCNAFTRRVRRRY" XX SQ Sequence 2984 BP; 799 A; 687 C; 748 G; 750 T; 0 other; ttcctgcata attttttttc cacgaaagtg gaaagcacgt ttatgcagga agacctcatc 60 ctagtccagc cggataccga ctgggttggt ggggtcaacc gatcatggag aagcttgtta 120 ccggtcctca acggggtaga atatattcta cctcgcggat cgctagtagg cttaaaactc 180 cacggtcgtt ccacacttcc acaatcgtgg gagcggggcg atcgttatca ttcggatctc 240 cttaagaggg atctgatgat aaggctaacg agggaccttg gtctctcggg acgccatgcg 300 gatcgtttgg tcaatagacc ggcgatccac ttgaagcgga ttgaagagtt catatctgga 360 ctcgtcgata gcttctggtt aggagatcct aggacattcg ccttgggatc tcccgacttt 420 aaaaccttcc gaacaatagt ccggaaaatc tttgccgtag gcacttccaa tttgggaatg 480 cttatgacta attggaagga atggaccaat tggttcactc attccgtatg tgagacagaa 540 ttgcgtgagg aagcgaagct ttctaatcac aatatgtttc acagactggc gagactttct 600 gtcgtacaga aggccttgtc aggagatgtg ccactgatgg agcttggctc catcgtcgca 660 catcttacct caacgcggca aatgccatat atgggattac cgactgaggt aaaggcgaag 720 gctgatttca ttgaaatcat ttctacgcct ttccacgttg aaccttctca ccatcgtcag 780 atggttcaat gtgctgcccg aatgggtagg ctctgtatga gtctacgcaa tggggttccg 840 gtgagcgata gaagtagtca cttctccgct acatcgtcag gtgaacttga ccactcccta 900 accagggggg gacaagcaca agcgctgaaa gatgccatcg ataaatggct gattccagct 960 tccggtagca cttacatgga ggatactcca tttggtgtcg ccgaacacag agagggtgtt 1020 ccattatgga aaactctttt tgtggaccaa gagactcagc tagagctgat tttctcggac 1080 ttcggggatt cccttgactg gatcaaggat gtcccaggaa gagtatacgg tcttgacgac 1140 tacacaggtc gccagatcct atacgtagct tggaaggaaa tggaagatat tccacatatc 1200 cgagcttcta cggtgcctga gttaggaaac aaggcccgta tcgtgacact ttcagccttt 1260 tggctgaatg tgttacaagc gcctctttca cacataatga aggaggtgct caagtaccat 1320 cctagttgct tcgcgagttt cactcgcggc gaccaggcat ggcacgcagc cagcggactg 1380 ggtaggttaa atccccgctc cgtcgccggt tacagtgtgc tttcttcaga tttgaagaac 1440 gccactaatg ctcagcatat tgcgctaacg cgtgatatgc tgcgcgcatt catatattct 1500 tcgggacttg tagtctcgga ggcctatgtg aatttagtct tggacacaat atgccctaga 1560 ctagtcgaac tagatgggga atttacactc tcgtgtagag gaatcatgat gggggaggct 1620 attgccaaac cctcactgac tctccttaat ctagtcgtcg aagagctagc ttttctcaaa 1680 tatgagaata agctggttct tcttaacacc gacaaagctg cgccatcgcg tagatggcgg 1740 tgttatcatg ttggagggga tgaccatctc gcggtgggtc ccgaccaata tctagaccta 1800 atcactcata atcatgagtt atcaggttct atcatctccc cggacaaaca tggtaagtcc 1860 aggaagatgg tgaaatactg tgaacgcgta ctattagtac agaatttaca gtataatacc 1920 ccagatagaa aacctttcga gcatggcttg attgtggatt ctattaaggt aaggcttctc 1980 gagaagggtc aatcgactct gatcgcgaag gataacaaga atgtcgcggt tggtaaatcg 2040 caacaacttg ttaaatctct tgactggttg ccaaagcaac tttattccaa gggattcatc 2100 cgttcgatac aacatttgtt tatcaagcgg atggggagtt tattaccaaa tcgcaatcgc 2160 gatgaggaag cattccattc cgtgtgtctc cctaagatat tgggaggtta cggactcggc 2220 ttggctgagg atctattgac ccacctatcc aagtcgaaac ccgaaataca gcagacagta 2280 tccgctgtac tctacgggat cgagaccaga cgagcaagaa atatcctgtc ccgcctgaac 2340 acgacaatct ccgaccgctc aattcaagga acgaagtggt acgaagacga aatggtacaa 2400 caattcaggg aataccccga catggtaggt gccattgacg gtagggagat gcgcagaaga 2460 tttcctgcgt caacctatca agaatcgaaa gcccacgccg cgtcagcggg ttggcttccg 2520 atagatcagc tagcccgaag agtgacccgt ggtcacctat ttggtgagct gatgagtggc 2580 ggtgcgaaaa gacaaaatgt cttcaagacc cgcaactgga tccaagagtt cacgcgattg 2640 cgcaaacgcc tggaggaaga ggttgggtat ttaccgttac cggaatacgc cgacctagaa 2700 gtcaagaccc tcaggaatgc cctgggagcg atgacaacag acttgttcat tgactctcgc 2760 caagttacaa gttttgacaa aggagtagga gacgatagct tcgacttctt tgatggtgaa 2820 ctacttagga cttatgaagc ccatcaaccc aacctagtgg tcgggctgca gttcatcggt 2880 ttagatagta cctgtaatgc ttttacccgt agggtgaggc gtagatacta atctaaaaat 2940 taaaacgtgc attcgactat agtcgaaaaa aaggaaaaaa gaaa 2984 //