ID   JN387065; SV 1; linear; genomic RNA; STD; VRL; 1573 BP.
XX
AC   JN387065;
XX
DT   20-FEB-2013 (Rel. 115, Created)
DT   20-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Chilli ringspot virus isolate YZ1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1573
RA   Zhang Y.-L., Wang J.-H., Xiong Z.-G., Shao S.-Y., Liu Z.-X., Gong D.;
RT   "First report of Chilli ringspot virus in China";
RL   Unpublished.
XX
RN   [2]
RP   1-1573
RA   Zhang Y.-L., Wang J.-H., Xiong Z.-G., Shao S.-Y., Liu Z.-X., Gong D.;
RT   ;
RL   Submitted (20-JUL-2011) to the INSDC.
RL   Institute of Tropical Bioscience and Biotechnology, Chinese Academy of
RL   Tropical Agricultural Science, 4 Xueyuan Road, Haikou, Hainan 571101, P.R.
RL   China
XX
DR   MD5; 371f1e77aa7e68981b265022a2339ed6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1573
FT                   /organism="Chilli ringspot virus"
FT                   /host="Capsicum chinense"
FT                   /isolate="YZ1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hainan, Yingzhou"
FT                   /collection_date="01-Oct-2009"
FT                   /PCR_primers="fwd_name: chirsv-f, fwd_seq:
FT                   cgtagacaacacactcatggt, rev_name: chirsv-r, rev_seq:
FT                   gttttcccagtcacgac"
FT                   /db_xref="taxon:414528"
FT   CDS             <1..1390
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:M1F401"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:M1F401"
FT                   /protein_id="AFJ19353.1"
FT                   /translation="IITMHYAVRRAGLNYQEFCDNVKFVANGDDLIMAVKPCKEFLLDT
FT                   LQNTFSELGLTYDFTSRTRNKEDLCFMSHNGVMRDGIYIPKLEKERIVSILEWDRASEP
FT                   QNRLEAICASMIEAWGYDELLYQIRLFYAWVLEQAPYRELAKQGKAPYISEGALKKLYT
FT                   GEDSDFQVYLRSLIQNQWKDEDTTVYHQADTQAVDAGKSTQSAEKKSANPASASKAIAE
FT                   TPRDRDVNVGTAGTFSVPRLKGISSKLNLPMINKKAVINLDHLLKYTPDQVALSNTSAL
FT                   NSQFASWYEGVKTDYGLNDSQMEIVLNGLMVWCIENGTSPNLNGMWVMMDGDEQVEYPI
FT                   KPLLDHARPTLRQIMAHFSNLAEAYIEKRNAEKPYMPRYGLQRNLTDMTLARYAFDFYE
FT                   INSKTPARAREAHIQMKAAAVMHAKNNMFGLDGNVSTKEENTERHTATDVNRDMHHLMG
FT                   VRGV"
FT   mat_peptide     <1..574
FT                   /product="NIb"
FT   mat_peptide     575..1387
FT                   /product="CP"
FT   3'UTR           1391..1573
XX
SQ   Sequence 1573 BP; 490 A; 310 C; 368 G; 405 T; 0 other;
     gataataaca atgcactatg cagtgcggag agcaggccta aactaccaag aattttgtga        60
     taatgtgaag tttgtcgcca atggagatga tttaatcatg gcagtgaagc cttgtaaaga       120
     gtttttgcta gacacactac agaacacatt ttctgaactc ggcttgacat atgattttac       180
     aagtcgcaca aggaataaag aggatttgtg tttcatgtcg cacaatggag tgatgcgcga       240
     cggcatttat atccctaagc tcgaaaaaga acgaattgtg tcaattctgg agtgggatag       300
     agcatctgag ccacagaatc gtttagaggc catctgtgca tcgatgatcg aagcttgggg       360
     ttatgacgaa cttttgtatc aaatccgtct gttctatgct tgggtgctcg agcaggcgcc       420
     ctaccgagaa cttgcaaaac aagggaaggc accatacata tcagaagggg ctctcaaaaa       480
     gttgtataca ggagaggatt cagactttca ggtttacctt cgctctctca ttcaaaacca       540
     atggaaggac gaggatacga ctgtttatca tcaagctgac acacaagccg tggatgctgg       600
     gaagagtaca cagagcgcag agaaaaagtc agcaaatcca gcctcagcga gtaaggcaat       660
     agcggaaaca ccacgagaca gagatgtcaa tgtcggtaca gctggcacat tttctgttcc       720
     tcgactcaaa ggcatctcat ccaagttaaa tctaccaatg ataaacaaaa aggctgtgat       780
     aaacttggat cacctgctca agtacacacc ggatcaagtg gcactttcaa acacaagtgc       840
     gctcaactcg caatttgctt cgtggtatga gggtgttaaa actgattatg gcctaaatga       900
     ctcacaaatg gaaatagttt tgaatggtct aatggtttgg tgtatcgaga atggaacatc       960
     accaaatcta aatggaatgt gggtcatgat ggatggtgat gaacaagttg agtatccgat      1020
     caaacctctc ctggatcacg ctaggccgac ccttaggcaa atcatggcac atttcagtaa      1080
     cttggcagaa gcttatatag aaaagcgtaa tgcagagaaa ccatatatgc caaggtatgg      1140
     tttgcagcgc aatttgactg acatgactct agctcggtat gcatttgact tctatgagat      1200
     taactcaaaa acaccagcta gagcgagaga agctcacatc caaatgaagg ccgcagctgt      1260
     tatgcacgca aagaacaata tgtttggtct ggatggaaat gtcagcacta aagaggaaaa      1320
     cacagagcga cacacagcca cagatgtgaa ccgtgacatg catcacttga tgggagtcag      1380
     aggagtgtag agctctttta ctatatatct atctgcatat ataatatagt atttagtttt      1440
     cctttctgaa ccagttgtct tgacattata gtgtggcgta ccacgaagtg tcattaccac      1500
     ctggattttt ctacgatctg ccattgttgt aagtgatgtt ttacatcgtt caatgttggg      1560
     tagtggcaaa agg                                                         1573
//