ID JN387045; SV 1; circular; genomic DNA; STD; VRL; 2755 BP. XX AC JN387045; XX DT 13-DEC-2011 (Rel. 111, Created) DT 13-DEC-2011 (Rel. 111, Last updated, Version 1) XX DE Tobacco curly shoot virus isolate To-Ag-1 segment A, complete sequence. XX KW . XX OS Tobacco curly shoot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2755 RA Shilpi S., Mandal B.; RT "Characterization of Tobacco curly shoot virus infecting tomato in India"; RL Unpublished. XX RN [2] RP 1-2755 RA Shilpi S., Mandal B.; RT ; RL Submitted (22-JUL-2011) to the INSDC. RL Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New RL Delhi, Delhi 110012, India XX DR MD5; 4ddd2196808fcf21104f9384b25547a7. XX FH Key Location/Qualifiers FH FT source 1..2755 FT /organism="Tobacco curly shoot virus" FT /segment="A" FT /host="tomato" FT /isolate="To-Ag-1" FT /mol_type="genomic DNA" FT /country="India:Agartala, Tripura" FT /isolation_source="leaves showing curling symptoms" FT /collection_date="Feb-2010" FT /db_xref="taxon:180526" FT gene 143..499 FT /gene="AV2" FT CDS 143..499 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /note="pre-coat protein" FT /db_xref="GOA:G9HRV2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G9HRV2" FT /protein_id="AEV54098.1" FT /translation="MWDPLVNEFPESVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHTRFEGTPPSQLRQPISEPCCCPHCPRHQIKSMGEQAHEQ FT KAQDVQDVQNSRCP" FT gene 303..1073 FT /gene="AV1" FT CDS 303..1073 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:G9HRV3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G9HRV3" FT /protein_id="AEV54099.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYLSRAAAPIVRVTKSRAWA FT NRPMNRKPRMYRMYRTPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFWRGFYMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1070..1474) FT /gene="C3" FT CDS complement(1070..1474) FT /codon_start=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:G9HRV4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G9HRV4" FT /protein_id="AEV54100.1" FT /translation="MDSRTGELITAAQAENGVYIWEIQNPLYFKILEHQNRPFLMKEDI FT MTIQIQFNYNLRKALGVHKCFLVYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN FT VIRAVDHVLWNLLEHIVYVQQTYSIKFNIY" FT gene complement(1215..1619) FT /gene="C2" FT CDS complement(1215..1619) FT /codon_start=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:G9HRV5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G9HRV5" FT /protein_id="AEV54101.1" FT /translation="MRSSSPSKAHSTQVPIKVQHKLAKKGNRRRRVDLPCGCSYFIALA FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPLFQDIRAPEPSISHERRHNDNPNTIQLQP FT AESSGSAQVFSSLPNLDDFTASDWSFLKGL" FT gene complement(1522..2607) FT /gene="C1" FT CDS complement(1522..2607) FT /codon_start=1 FT /gene="C1" FT /product="C1" FT /db_xref="GOA:G9HRV6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G9HRV6" FT /protein_id="AEV54102.1" FT /translation="MPQPKKFLINAKNYFLTYPQCSLTKEEALSQISALSTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFH FT KLNSNLDRIFTPPTEEYISPFLSSSFDQVPEELEEWAVENVVSAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNEAWYNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKIWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGEQASSC" FT gene complement(2157..2579) FT /gene="C4" FT CDS complement(2157..2579) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G9HRV7" FT /protein_id="AEV54103.1" FT /translation="MPRIISSLIHNAPLLKKRHFPKSQPYQPRLINYSYVFAGNYTKMG FT LLTCMSSSSSKANSNAKTTDSSISHPQADQHISIRTFRELKAQQMLKHTWKKTETCLIM FT EFSRSMEDQLEEVANLPTTHMPRQSIQGPKQRPSIY" XX SQ Sequence 2755 BP; 757 A; 543 C; 612 G; 843 T; 0 other; accggatggc cgcgattttt tttaaagtgg tcccccctgc gcactactca tgacatgccc 60 accaatcaaa atcgtctctc aaagcttaat tgtttcctgg tcccctctat aaacttggtc 120 cccaagttgc ccacattaca aaatgtggga tcctttagtg aacgagtttc ccgaatccgt 180 tcacggcttt cggtgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc 240 tcctgacaca ttagggtacg atttaattag ggatttaatt tcagtaatta gggccagaaa 300 ttatgtcgaa gcgaccagca gatataatca tttccacacc cgcttcgaag gtacgccgcc 360 gtctcaactt cgacagccca tatctgagcc gtgctgctgc ccccattgtc cgcgtcacca 420 aatcaagagc atgggcgaac aggcccatga acagaaagcc caggatgtac aggatgtaca 480 gaactccaga tgtccctaga ggatgtgaag gcccatgtaa ggttcagtcg tttgagtcca 540 gacatgatat tcagcatata ggtaaagtca tgtgtgtcag tgatgttacg cgtggaactg 600 ggctgaccca tcgagtgggt aaaagatttt gtgttaaatc cgtttatgtc ttgggtaaga 660 tctggatgga tgagaatatt aagaccaaaa accacactaa cagtgttatg ttttttttag 720 ttagggatcg taggcctgtg gataaacctc aagatttttg gagaggtttt tacatgtttg 780 ataatgagcc cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc 840 gcaaatggca tgcaactgtt acgggtggac aatatgcgtc gaaggaacaa gcccttgtga 900 agaagtttgt tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg 960 agaatcattc tgagaatgcg ttaatgttgt atatggcatg tactcatgcc tctaacccag 1020 tgtatgctac tttgaaaata cggatctatt tctatgattc cgtaacaaat taataaatat 1080 tgaattttat tgaataagtt tgttgtacat atacaatgtg ttctaataga ttccataata 1140 catgatcaac tgcacgaatt acattattaa tactgataac tcctaagtta tttaaatatt 1200 ttaaaacttg agtcttaaag acccttaaga aacgaccagt ctgaggctgt gaagtcatcc 1260 agattcggta gactagaaaa cacttgtgca ctcccagagc tttccgcagg ttgtagttga 1320 attgtatttg gattgtcatt atgtcttctt tcatgagaaa tggacggttc tggtgctcta 1380 atatcttgaa ataaagggga ttttgaatct cccagatata cacgccattc tctgcttgag 1440 ctgcagtgat gagttcccct gtgcgtgaat ccatgatcgt gacaggctaa tgcgatgaaa 1500 tatgaacaac cacaagggag atcaacacga cgacgcctgt tccccttctt ggctagcttg 1560 tgctgcactt tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt 1620 ttttaaagcc caaattttaa gtgctgtatt tttctcttca tccaagaatt ctttatagct 1680 agagttgggt cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg 1740 cttcccgtat tttgtattgc tttgccagtc cctttgggcc cccatgaatt ccttaaagtg 1800 ctttaggtag tggggatcga cgtcatcaat gatattatac caggcctcat tattgtacac 1860 cttagggctt aggtctagat gaccacacaa ataattatgt ggtcccaacg atctggccca 1920 catggtcttg cccgttctac tatcaccttc aattactata ctcatgggtc tcaatggccg 1980 cgcagcggca ctgacgacat tctcgacagc ccattcctca agttcttctg gaacttgatc 2040 gaaagaagaa gataaaaaag gagaaatgta ttcctctgtc ggaggagtaa aaatcctatc 2100 taaattagaa tttaatttat gaaactgtaa tacaaaatct ttaggagctt tctcctttaa 2160 tatattgagg gccgctgctt tggaccctga attgattgcc tcggcatatg cgtcgttggc 2220 agattggcaa cctcctctag ctgatcttcc atcgatctgg aaaactccat gatcaagcac 2280 gtctccgtct ttttccatgt atgctttaac atctgttgag cttttagctc cctgaatgtt 2340 cggatggaaa tgtgctgatc tgcttgggga tgtgagatcg aagaatctgt tgttttggca 2400 tttgaatttg ccttcgaact ggatgaggac atgcaggtga ggagacccat cttcgtgtag 2460 ttccctgcaa atacgtatga ataatttatt agtcggggtt gatagggctg agatttggga 2520 aagtgcctct tctttagtaa gggagcattg tggataagtg aggaaataat tcttggcatt 2580 tattaaaaat ttttttggct gaggcatatt gactggtcaa tcgggtcctc tcaaacttgg 2640 ctatgcaatc ggggaatggg tccttattta tagttgagga cctaaatggc atattcgtaa 2700 atatggaaat gcaattcaaa attcaaaatc caaaagcggc catccgtata atatt 2755 //