ID JN381828; SV 1; circular; genomic DNA; STD; VRL; 2625 BP. XX AC JN381828; XX DT 21-MAR-2012 (Rel. 112, Created) DT 05-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Tomato rugose yellow leaf curl virus isolate U5 clone 4 segment DNA_B, DE complete sequence. XX KW . XX OS Tomato rugose yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2625 RX PUBMED; 22383056. RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., RA Teresa Federici M., Vincelli P., Navas-Castillo J., Moriones E.; RT "Diverse population of a new bipartite begomovirus infecting tomato crops RT in Uruguay"; RL Arch. Virol. 157(6):1137-1142(2012). XX RN [2] RP 1-2625 RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., Federici M.T., RA Vincelli P., Navas-Castillo J., Moriones E.; RT ; RL Submitted (20-JUL-2011) to the INSDC. RL Virology, Inst. Hortofruticultura Subtropical y Mediterranea 'La Mayora' RL (IHSM-CSIC), Algarrobo Costa s/n., Algarrobo Costa, Malaga 29760, Spain XX DR MD5; 4cda72d74a84b453e681f79c5db60a4d. XX FH Key Location/Qualifiers FH FT source 1..2625 FT /organism="Tomato rugose yellow leaf curl virus" FT /segment="DNA_B" FT /host="tomato" FT /isolate="U5" FT /mol_type="genomic DNA" FT /country="Uruguay:Salto Grande" FT /collection_date="2009" FT /identified_by="B. Marquez-Martin" FT /clone="4" FT /db_xref="taxon:1162280" FT gene 486..1256 FT /gene="BV1" FT CDS 486..1256 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /db_xref="GOA:H8ZPR6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H8ZPR6" FT /protein_id="AFD62709.1" FT /translation="MYTIRYRRGKSYTQGRGYSRYPLLKRSYYIKRTDWKRRSSKVTHA FT DEDKKMSSQRLHENQFGAGFAMAHNTAMSTYITFPTLGRTEPNRSRSYIKLKRLRYKGT FT VKIERVHADVNMDVPAPKIEGVFSLVVVVDRKPHLNETGSLHSFDEIFGARINSHGNLA FT IAPAFKDRYYIRHVLKRVLSVEKDSLMVDLEGSMSLSNRRFNCWSTFKDLDRDSCNGVY FT ANISKNALLVYYCWMSDNASNASTFVSYDLDYVG" FT gene complement(1359..2240) FT /gene="BC1" FT CDS complement(1359..2240) FT /codon_start=1 FT /gene="BC1" FT /product="MP" FT /db_xref="GOA:H8ZPQ8" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H8ZPQ8" FT /protein_id="AFD62710.1" FT /translation="MESQLVHPPHAFNYIESQRDEYQLSHDQTEIKLQFPSTTSQLSAR FT LSRSCMKIDHSVIEYRQQVPINATGTVIVELHDTRLTHNESLQASWTFPIRCSIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQGTHFAKIKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTEKDIDFSHVGYGKWERKLIRSASTTRFGLPGPIEIRPGESWATRSSIGHTQSDAE FT SDAGDAVHPYRHLNRLGTTVLDPGDSASIVGAHRAQSNITMSLAQLNDIVRSTVQECIN FT TNCIPSQPKSLK" XX SQ Sequence 2625 BP; 682 A; 475 C; 636 G; 832 T; 0 other; actggatggc cgcccgattt tggtgtccta acttgtggtg gccccacgcg ctttggcaga 60 tgagtttacc aaagtgcccc tggtgtcccg tggagtttac caaattgtcc ttggtgtccc 120 gaaaatagtt gagcgcattt ttgacgtccg cgaaatgtgt ggaatgtacg tttgggttcc 180 gtggactggg tcaacaagaa attcaaatta aagtggatct atgtttgtct agccaatcat 240 ttcgcgagtg ggaagtctct ttattttttg caacagtggt tgttataatg tgtcggataa 300 tagctgatcg tcacttcgta ctgtaataat tgtgtgtgtg gcactattgg ccatatttac 360 gtggaccaat tgaacatgtg gcacggtgtc taattattgg atattatcta gtatgaattg 420 tgtatatata cacgatattg attgatgtgt aaattatatc tagttatatt tcctacaatt 480 tgaacatgta tactattaga tatagacgtg gtaagtccta tactcaagga cgaggttatt 540 cacgctatcc tttgttgaag cgttcgtact atattaaacg gacggattgg aagcgtcgat 600 ctagtaaagt gacccatgct gatgaagata agaagatgtc atcccagcgg ctacatgaga 660 atcagttcgg tgctggattt gctatggctc ataatacagc gatgtccaca tacatcacct 720 tcccaacact tggtaggacc gaacctaacc gttccaggtc atacatcaag ttgaaacgct 780 tacgttacaa gggtactgtg aagattgaac gtgttcatgc tgatgtgaac atggacgttc 840 cagctccaaa aattgaagga gtcttttctt tggttgtggt ggttgatcga aaaccgcatt 900 tgaacgaaac tggtagtttg cattcattcg acgaaatatt cggtgcaagg attaatagtc 960 atggtaattt agccatagct cctgcgttta aagatcgtta ttacatacgt catgtgctaa 1020 aacgagtgct gtcagtggag aaggatagtc tgatggtcga tctggaagga agcatgtcat 1080 tatccaacag gcgtttcaac tgctggtcta cgtttaagga tttggatagg gattcatgta 1140 atggggttta tgccaatata agcaaaaacg ccctcttagt ttattactgt tggatgtcgg 1200 ataacgcgtc gaatgcatcg acatttgtat catatgatct tgattatgtt ggttgaataa 1260 attgtattgt tgagtgtcta atttgtatat gctgttttgc gagtaactaa aatttgataa 1320 ataagtactc gtgcatactg atatgttaac aactagtttt atttcaacga tttgggttgt 1380 gatggaatac agttggtgtt gatacattct tggactgtcg accggacaat gtcgtttaac 1440 tgggctaatg acattgtgat gttggactgt gccctatgag cacccactat agaagccgag 1500 tctcccgggt ctaagacggt ggttcctaac ctattgagat gtctatatgg gtgtaccgcg 1560 tcccctgcgt ccgattctgc atctgattgg gtatgtccga tgctgctcct tgtagcccaa 1620 gactcaccgg gccttatttc tattgggcct ggaagtccaa atcttgttgt ggatgcggat 1680 ctgatcaatt tcctctccca tttcccataa cccacgtggg agaaatcgat gtccttctcc 1740 gtgaattgtt tggacaagat cttgaccgtc ggtgctcgga aaggaatatc aacggagtgt 1800 ttagccgtgg ataacttgag cttccccttt attttcgcga aatgagtccc ttgatgtacg 1860 ttggtgtcgc aaaccctata atatagtttc catggaattg ggtctttgag tgagaagaat 1920 gaggatgaga aataatggag atctatactg caccggatcg gaaatgtcca cgacgcttgt 1980 aatgattcgt tgtgtgtgag cctcgtgtca tggagctcta ctatcactgt ccctgtagcg 2040 ttgattggta cttgctgcct gtattctatg acgctatggt cgatcttcat acagctgcga 2100 cttagtctgg cacttagttg agatgtcgtg gacggaaact gcaacttaat ctccgtttgg 2160 tcatgcgata actggtattc atcacgctga gattctatat aattaaaggc atgtggtgga 2220 tgcactaact gagattccat tggtaaatct ggccgcgcag cggaaacgtc tgtgaagttt 2280 gtttgacgaa gagacgattg acgaagagaa aattctagga aactgaattg aagatgagaa 2340 attgatatgg aacaaactga agatggaaaa agttaaacga attgtgtgtt atgttgtggt 2400 aagggatctg atgaagtaga gtgtgtggta ttgttaataa tatgtgtggc agtcctctta 2460 aatagacttt aaatgttgtt atggaggaca ccagcatcaa ataatggagg acaccggtat 2520 ggctctcaac ttctctccta tttgttggtg tcctggtgtc ccttttaaac cctcttgaat 2580 cctcttgaat tctatagggg tataagcggc catccatata atatt 2625 //