ID JN381820; SV 1; circular; genomic DNA; STD; VRL; 2650 BP. XX AC JN381820; XX DT 21-MAR-2012 (Rel. 112, Created) DT 05-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Tomato rugose yellow leaf curl virus isolate U2 clone 2 segment DNA_B, DE complete sequence. XX KW . XX OS Tomato rugose yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2650 RX PUBMED; 22383056. RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., RA Teresa Federici M., Vincelli P., Navas-Castillo J., Moriones E.; RT "Diverse population of a new bipartite begomovirus infecting tomato crops RT in Uruguay"; RL Arch. Virol. 157(6):1137-1142(2012). XX RN [2] RP 1-2650 RA Marquez-Martin B., Maeso D., Martinez-Ayala A., Bernal R., Federici M.T., RA Vincelli P., Navas-Castillo J., Moriones E.; RT ; RL Submitted (20-JUL-2011) to the INSDC. RL Virology, Inst. Hortofruticultura Subtropical y Mediterranea 'La Mayora' RL (IHSM-CSIC), Algarrobo Costa s/n., Algarrobo Costa, Malaga 29760, Spain XX DR MD5; 5e5f826e5ef7705ea2a589996ea1a69e. XX FH Key Location/Qualifiers FH FT source 1..2650 FT /organism="Tomato rugose yellow leaf curl virus" FT /segment="DNA_B" FT /host="tomato" FT /isolate="U2" FT /mol_type="genomic DNA" FT /country="Uruguay:Salto Grande" FT /collection_date="2009" FT /identified_by="B. Marquez-Martin" FT /clone="2" FT /db_xref="taxon:1162280" FT gene 487..1257 FT /gene="BV1" FT CDS 487..1257 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /db_xref="GOA:H8ZPN6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H8ZPN6" FT /protein_id="AFD62681.1" FT /translation="MYTIRYRRGKSSAQGRCYSRYPLSKRSYSVKRTEWKRRPSKVTHA FT DEDKKMSAQRLHENQFGPDFVMADNTALSTFISFPILGKTEPNRTRSYIKLKRLRYKGT FT VKIERVHADVNMEGSTPKTEGVFSLVVVVDRKPHLNESGGLHTFDEIFGARINSHGKLA FT ITPAFKDRYYIRHVLKRVLSVEKDSLMVDLDGSMSLSNRRFNCWSTFRDLERDTCNGVY FT ANISKNALLVYYCWMSDSRSTASTFVSYDLDYVG" FT gene complement(1363..2244) FT /gene="BC1" FT CDS complement(1363..2244) FT /codon_start=1 FT /gene="BC1" FT /product="MP" FT /db_xref="GOA:H8ZPN7" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H8ZPN7" FT /protein_id="AFD62682.1" FT /translation="MESQLVHPPNAFNYIESQRDEYQLSHDQIEIKLQFPSTTSQLSAR FT LSRSCMKIDHSVIEYRQQVPINATGTVIVELHDTRITHNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYKVCDTNVHQGTHFAKIKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTEKDIDFSHVGYGRWERKLIRSASTARVGLPGPIEIRPGESWATRSTIGISQSDAD FT SDIGDAAHPYRHLNRLGTTILDPGESASIVGANSTHSNITMSMAQLNDLVRSTVQECIN FT TNCTPSQPKSLK" XX SQ Sequence 2650 BP; 706 A; 477 C; 642 G; 825 T; 0 other; actggatggc cgcccgattt tggtgtccta gcctttggtg gccccacacg ctttggtgag 60 tgagtttacg taaatgcccc tggtgtctcg ggaaagttcc caaaatgtcc ctggtgtccc 120 caaattagtt gagcgcaatt ttgacgtccg cgaaatgagt ttaattgtct tttgagttcc 180 gctgactggg tcaacttgaa attcaaatta aaggcgaagt attttgtcta gccaatcatt 240 tcgcgagtgg gaagtctctt tatttatgac actgtttgtt gatgtcagtg tgtggaggaa 300 atattgtcgt cgtttgaata tataattatt gtgtttatgt ggcactattg gtcatattac 360 gtggaccaat tgaatatgtg gcacggtgtt taattattgg atattagcta gtatgaattg 420 tgtatatata gtctatattt gttgaggtgt atactatgtt caattatatt tcctgtattt 480 tggaccatgt atactattag atacagacgt ggcaagtcgt cagctcaagg acgatgctat 540 tctcgctatc ccttgtccaa gcgttcttac tctgtgaaac ggactgagtg gaagcgtcgc 600 ccgagcaagg tgactcatgc tgatgaagat aaaaagatgt cagcccagcg gttacatgag 660 aaccagttcg gtcccgactt tgttatggcc gataatacag cgttatcgac cttcatcagc 720 tttcctatcc tgggtaagac cgaacccaac cgaacgaggt catatattaa gttgaagcgc 780 ctacgttaca aaggcactgt gaagattgag cgtgttcatg ctgacgtgaa catggaaggt 840 tcaactccta aaactgaagg agtattttcg ctggttgtgg ttgtggatcg taaaccacat 900 ctgaatgagt ccggaggtct ccatacattt gacgagatat ttggtgcgag gattaatagt 960 catgggaagt tagccataac tcctgcgttt aaagatcgtt attacatacg tcatgtgctg 1020 aaacgtgtgt tgtcagtgga gaaggatagc ctgatggttg atctggatgg cagcatgtca 1080 ttatcgaaca ggcgtttcaa ctgttggtct acgtttaggg atctggaacg tgatacatgt 1140 aatggtgtat atgctaacat aagcaaaaac gccctcttag tgtattattg ttggatgtct 1200 gatagcagat caactgcgtc gacgtttgta tcatatgatc tggattatgt tggttgaata 1260 aatttgtttt ttgagttgtc caattataag aagatgattg gtaattaaaa caaatgtgat 1320 aaacgagcac ttggtgaaac tgatatatta ataaatgagt atttatttta acgacttggg 1380 ctgcgaagga gtacaattgg tgttgataca ttcttgtact gtcgaccgga caaggtcgtt 1440 taattgggcc attgacatgg tgatgttgga atgtgtgcta ttagccccta ctatggacgc 1500 agactctcct ggatctaata tggtagttcc taacctattg agatgtctat atgggtgtgc 1560 tgcgtcccct atgtccgagt ctgcatcaga ctgactaatc cctatggtgc tccttgtagc 1620 ccaagactct ccgggcctta tttctattgg gcctggaagc ccaactcttg ctgtggatgc 1680 ggatcggatc aatttcctct cccatctccc ataacccaca tgggagaaat ctatgtcctt 1740 ctctgtgaac tgcttggaca agatcttgac cgtcggtgcc cggaaaggga tatcaacgga 1800 atgtttagcc gtcgataatt tgagcttccc cttgatcttg gcgaagtgag tcccttgatg 1860 aacattggtg tcgcaaacct tgtaatataa tttccatgga attgggtctt tgagcgagaa 1920 gaatgaggat gagaaataat ggagatctat gttgcaccgg atcggaaatg tccacgacgc 1980 ttgtaaggac tcgttgtgtg taatcctcgt gtcatggagc tcgactatca ctgtccctgt 2040 ggcgttgatt ggtacttgct gcctatattc tatgacgctg tggtcgatct tcatacagct 2100 acgacttagt ctggcactga gttgagacgt cgtggatgga aactgcaact taatctcaat 2160 ttggtcatga gataactgat attcatcacg ctgagattct atataattaa aggcatttgg 2220 gggatgcact aactgagatt ccattggtaa acctggccgc gcagcgtaaa cgtctgggtt 2280 aatgaattga ggaagagaaa atgttatgtc taatgaattg aggaagagat aatgttatgt 2340 ctaacgaatt aacgaaagga aaacgatgag aaattgattt gaagaagaga aattgctatg 2400 aaacagaact gaagatgaaa aaatttaaat gtattgtgtt tatgtagtgg tatgagtatg 2460 aatatgaaag tgtttgtctt tcttaaatag aaaaaaactt gaataatgag gatgtgagga 2520 ggaacgtatg gaggacacca gctctcgctc tcaacttctc tcctatttgc tggtgtcctg 2580 gtgtcccttt taaaccctct tgaatcctct tgaattctta aggggcaaaa gcggccatcc 2640 atataatatt 2650 //