Dbfetch

Dbfetch

ID   JN256019; SV 1; linear; genomic RNA; STD; VRL; 666 BP.
XX
AC   JN256019;
XX
DT   05-AUG-2012 (Rel. 113, Created)
DT   30-NOV-2012 (Rel. 115, Last updated, Version 4)
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DE   Alfalfa mosaic virus isolate Champaign coat protein (CP) gene, complete
DE   cds.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-666
RX   DOI; .1094/PDIS-08-11-0683-RE.
RX   PUBMED; 30727159.
RA   Khatabi B., He B., Hajimorad M.R.;
RT   "Diagnostic Potential of Polyclonal Antibodies Against Bacterially
RT   Expressed Recombinant Coat Protein of Alfalfa mosaic virus";
RL   Plant Dis. 96(9):1352-1357(2012).
XX
RN   [2]
RP   1-666
RA   Khatabi B., Hajimorad M.R.;
RT   ;
RL   Submitted (15-JUL-2011) to the INSDC.
RL   Entomology and Plant Pathology, The University of Tennessee, 2431 Joe
RL   Johnson Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996,
RL   USA
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DR   MD5; 086c55d06cfccf1ae22fd6c51061fb61.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..666
FT                   /organism="Alfalfa mosaic virus"
FT                   /host="soybean"
FT                   /isolate="Champaign"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12321"
FT   gene            1..666
FT                   /gene="CP"
FT   CDS             1..666
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:I6PDF3"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:I6PDF3"
FT                   /protein_id="AFH14524.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVAKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPHGAFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDLDRH"
XX
SQ   Sequence 666 BP; 156 A; 167 C; 174 G; 169 T; 0 other;
     atgagttctt cacaaaagaa agccggtggg aaagctggta aacctactaa acgttctcag        60
     aactatgctg ctttacgcaa agctcaactg ccgaagcctc cggcgttgaa agtcccggtt       120
     gcaaaaccga cgaatactat actgccacag acgggctgcg tgtggcaaag cctcgggacc       180
     cctctgagtc tgagctcttt taacgggctc ggcgtgagat tcctctacag ttttctgaag       240
     gatttcgcgg gacctcggat cctcgaagag gatctgattt acaggatggt gttttctata       300
     acgccgtccc atgccggtac cttttgtctc actgatgacg tgacgactga ggatggtagg       360
     gccgttgcgc atggtaatcc catgcaagaa tttcctcatg gcgcgtttca tgccaatgag       420
     aagttcgggt ttgagttggt cttcacagct cctacccatg cgggaatgca aaatcaaaat       480
     ttcaagcatt cctatgccgt agccctttgt ttggacttcg atgcgcagcc tgagggatct       540
     aaaaatccct cataccgatt caacgaagtt tgggtcgaga gaaaggcgtt cccgcgagca       600
     gggcccctcc gcagtttgat tactgtgggg ctgctcgacg aagctgacga tcttgatcgt       660
     cattga                                                                  666
//