ID   JN250593; SV 1; circular; genomic DNA; STD; VRL; 1111 BP.
XX
AC   JN250593;
XX
DT   12-DEC-2011 (Rel. 111, Created)
DT   12-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Banana bunchy top virus isolate Kandy segment DNA1, complete sequence.
XX
KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; Nanoviridae; Babuvirus.
XX
RN   [1]
RP   1-1111
RA   Wickramaarachchi W.A.R.T., Rangaswamy K.T., Shankarappa K.S.,
RA   Rajapakse R.G.A.S.;
RT   "Molecular characterization of banana bunchy top virus (BBTV) in Sri
RT   Lanka";
RL   Unpublished.
XX
RN   [2]
RP   1-1111
RA   Wickramaarachchi W.A.R.T., Rangaswamy K.T., Shankarappa K.S.,
RA   Rajapakse R.G.A.S.;
RT   ;
RL   Submitted (13-JUL-2011) to the INSDC.
RL   Division of Plant Pathology, Horticultural Crops Research and Development
RL   Institute, Department of Agriculture, Gannoruwa, Peradeniya, Central
RL   Province 20400, Sri Lanka
XX
DR   MD5; 2ecde2acd19fe0dcdff8efeac114f2ec.
XX
CC   GenBank Accession Numbers JN250593-JN250598 represent the complete
CC   genome of Banana bunchy top virus isolate Kandy.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1111
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA1"
FT                   /host="Musa sp. (banana)"
FT                   /isolate="Kandy"
FT                   /mol_type="genomic DNA"
FT                   /country="Sri Lanka"
FT                   /isolation_source="infected leaves"
FT                   /collected_by="W.A.R.T. Wickramaarachchi"
FT                   /collection_date="15-Feb-2010"
FT                   /identified_by="W.A.R.T. Wickramaarachchi"
FT                   /db_xref="taxon:12585"
FT   gene            102..962
FT                   /gene="R"
FT   CDS             102..962
FT                   /codon_start=1
FT                   /gene="R"
FT                   /product="replication initiation protein"
FT                   /note="Rep; master replication protein; initiates
FT                   replication of integral BBTV components"
FT                   /db_xref="GOA:G9G7R3"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:G9G7R3"
FT                   /protein_id="AEV53366.1"
FT                   /translation="MARYVVCWMFTINNPTTLPVMRDEIKYMVYQVERGQEGTRHVQGC
FT                   VEMKRRSSLKQMRGFFPGAHLEKRKGSQEEARSYCMKEDTRIEGPFEFGAFKLSCNDNL
FT                   FDVIQDMRETHKRPLEYLYDCPNTFDRSKDTLYRVQEEMNKTKAMNSWRTSFSAWTSEV
FT                   ENIMAQPCHRRIIWVYGPNGGEGKTTYAKHLMKTRNAFYSPGGKSLDICRLYNYEDIVI
FT                   FDIPRCKEDYLNYGLLEEFKNGIIQSGKYEPVLKIVAYVEVIVMANFLPKEGIFSEDRI
FT                   KLVPC"
XX
SQ   Sequence 1111 BP; 363 A; 195 C; 279 G; 274 T; 0 other;
     agcgctgggg cttattatta cccccagcgc tcgggacggg acatttgcat ctataaatag        60
     acctcccccc tctccattac aagatcatca tcgacgacag aatggcgcga tatgtggtct       120
     gctggatgtt caccatcaac aatcccacaa cactaccagt gatgagggat gagatcaaat       180
     atatggtata tcaggtggag aggggacagg agggtactcg tcatgtgcaa ggttgtgtcg       240
     agatgaagag acgaagctct ctgaagcaga tgagaggctt cttcccaggc gcacaccttg       300
     agaaacgaaa gggaagccag gaagaagcgc ggtcatactg tatgaaggaa gatacaagaa       360
     tcgaaggtcc cttcgagttt ggtgcattta aattgtcatg taatgataat ttatttgatg       420
     tcatacagga tatgcgtgaa acgcacaaaa ggcctttgga gtatttatat gattgtccta       480
     acaccttcga tagaagtaag gatacattat acagagtaca agaagagatg aataaaacga       540
     aggcgatgaa tagctggaga acgtccttca gtgcatggac atcagaggtg gagaatatca       600
     tggcgcagcc atgtcatcgg agaataattt gggtctatgg cccaaatgga ggagaaggaa       660
     agacaacgta tgcaaaacat ctaatgaaga cgagaaatgc gttttattct ccaggaggaa       720
     aatcattgga tatatgtaga ctgtataatt acgaggatat tgttatattt gatattccaa       780
     gatgcaaaga agattattta aattatgggt tattagaaga atttaagaat ggaataattc       840
     aaagcgggaa atatgaaccc gttttgaaga tagtagcata tgtcgaagtc attgtaatgg       900
     ctaacttcct tccgaaggaa ggaatatttt ctgaagatcg aataaagttg gttccttgct       960
     gaacaagtaa tgactttaca gcgcacgctc cgacaaaagc acactatgac aaaagtacgg      1020
     gtatctgatt gggatatctt aacgatctag ggccgtaggc ccgtgagcaa tgaacggcga      1080
     gatcagatgt cccgagttag tgcgccacgt a                                     1111
//