Dbfetch
ID JN236209; SV 1; circular; genomic DNA; STD; VRL; 2609 BP. XX AC JN236209; XX DT 03-OCT-2011 (Rel. 110, Created) DT 03-OCT-2011 (Rel. 110, Last updated, Version 1) XX DE Abutilon mosaic virus strain IN-UDG-JAX-2010 segment DNA B, complete DE sequence. XX KW . XX OS Abutilon mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2609 RA Malathi V.G., Jyothsna P., Haq Q.M.I., Prakash J.; RT "Occurence of Abutilon mosaic virus in India"; RL Unpublished. XX RN [2] RP 1-2609 RA Malathi V.G., Jyothsna P., Haq Q.M.I., Prakash J.; RT ; RL Submitted (10-JUL-2011) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute RL (IARI), Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; b664282c7a04203fb2778a63da242970. DR EuropePMC; PMC3784915; 24426288. XX FH Key Location/Qualifiers FH FT source 1..2609 FT /organism="Abutilon mosaic virus" FT /segment="DNA B" FT /host="Abutilon pictum" FT /strain="IN-UDG-JAX-2010" FT /mol_type="genomic DNA" FT /country="India:Udagamandalam (Ooty)" FT /collected_by="VG Malathi" FT /collection_date="27-Apr-2010" FT /clone="JAX4" FT /db_xref="taxon:10815" FT gene 392..1162 FT /gene="BV1" FT CDS 392..1162 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:G5CP98" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:G5CP98" FT /protein_id="AEP37332.1" FT /translation="MYLFRNKRGSFFNQRRQYSRNHAWKRQTATKRHDWKRRSTNTIKP FT NDEPKMSAQRIHENQYGPDFVMAQNSATSLFISYPDLGRSEPNRSRSYIRLKQLRFKGT FT VKIEQVQSVMNMDGSTPKVEGVFSIVIVVDRKPHLGPSGCLHTFDELFGARIHSHGNLS FT VTPALKDRYYIRHVCKRVLSVEKDTLMVDVEGSMPLSNRRINCWATFKDVDRESCKGVY FT DNISKNALLVYYCWMSDTPAKASTFVSFDLDYIG" FT gene complement(1222..2103) FT /gene="BC1" FT CDS complement(1222..2103) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:G5CP99" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:G5CP99" FT /protein_id="AEP37333.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVRILS FT KQFTEKDVDFSHVDYGKWERKPIRCASMSRIGLRGPIEIRPGESWASRSTIGTAQSDAD FT SEVENELHPYRQLNRLGPSVLDPGESASILGAQRAESNITMSMGQLNELVRTSVQECIN FT SNCQASQAKSLK" XX SQ Sequence 2609 BP; 650 A; 552 C; 636 G; 771 T; 0 other; accggatggc cgcgcgcccc ccccccctgg tgccgctttt gcacgcgctc taccctggcg 60 ctgttctcgc acgcgcattc ccattggtgc gggtccttca cgctcctctt ttgggtggcc 120 tttaatttga attaaaggtt tatactttct cgcgcgacat gctttataat ttgaatcctt 180 gtcgcgcgaa gactggcaat tgaccattgt atcttgtgaa ggacgtgtcc ataattggac 240 cttgctgttg agtctatttg cgattaatgg tggaccatct acctatatat tgtgtcggac 300 aggtaggttt tgtggtaatt gactcatcaa gccaccacgt tttttcgacc ctggttaatc 360 gtgttgtctt ttgttatatt atcatctgat aatgtacctg tttaggaata aacgtggatc 420 tttctttaat caacgtcgac agtattcacg caatcatgcg tggaaacggc aaactgctac 480 gaagagacac gactggaagc gtcgatcgac aaataccata aagcccaacg acgagcccaa 540 gatgtcagcc caacgcatac atgagaatca gtatgggcct gactttgtaa tggcccagaa 600 ctcagccacc tcgttgttca tcagttatcc tgacttgggt aggtccgagc ccaaccgaag 660 caggtcatat atcaggttga agcaactacg cttcaaaggg acggtgaaga ttgaacaggt 720 tcaatcggta atgaacatgg acggatctac tcccaaagtg gaaggagtct tctccattgt 780 cattgttgtg gatcgtaaac cacaccttgg cccctctggt tgtctgcata catttgacga 840 gctgtttggt gctaggatac acagtcatgg taacctcagc gtaacacccg cgttgaaaga 900 tcgatactac attcgccacg tttgcaaacg tgtgctatct gtggagaagg atacgctgat 960 ggtagacgtt gaaggatcca tgcctctctc taacaggcgt attaattgtt gggccacgtt 1020 taaggacgtg gatcgtgagt catgcaaggg tgtttatgat aacataagca agaacgccct 1080 gttagtttat tactgctgga tgtcggatac gcctgctaag gcatccactt ttgtatcgtt 1140 tgaccttgac tatattggtt aagtgaataa ataatgaatt ttcaaagttg atcattttat 1200 ttgtacaagc aaaacataca attattttaa agatttggct tgagaagcct gacagttact 1260 attgatacat tcttggaccg atgttctaac taattcgttc agctggccca ttgacattgt 1320 gatgttggac tccgctctct gggctcccag aatcgacgca gattctcctg ggtctagaac 1380 gctgggtccc agcctgttta gttgtctgta tggatgtagc tcgttctcca cttccgagtc 1440 cgcatcagac tgggctgtcc ctatggtgct cctggaagcc catgattcac caggcctaat 1500 ctcaattggg cctcgtaatc caatcctgga catggacgcg catctgatgg gcttcctctc 1560 ccatttgcca taatccacat gggaaaagtc cacgtctttt tcggtgaact gtttggacag 1620 tatccttact gttggtgccc ggaacgggat gtcgactgag tgtttcgccg tggacaattt 1680 cagttttcct ttgaacttgg cgaagtgggt ccgctgatgt acgtttgtat cgcagactct 1740 gtagtacaat ttccatggaa ttgggtcttt cagcgagaag aacgaagccg agaaatagtg 1800 gagatctatg ttgcatctta tcggaaaagt ccacgacgcc tgtaaagact cgttgtctgt 1860 cattctcttg tcgtggatct ccacaatcac cgtcccggtg gcgttgatcg gtacttgctg 1920 tctgtattct atgacgcagt gatcgatctt catgcagcta cgactgagcc tagctgtcaa 1980 ctgagacgcc gtggacggaa attgcagtat tatctcagtt aggtcatggg aaagttgata 2040 ttcgtcacgg tgtgactcga tgtagttgaa ggcgttcgga ggatttacta actgagaatc 2100 catttgaaga agaacgtccg cgcagcggaa tcggaaccga ttgctgaagt tgaacagtta 2160 agaagttgaa cagttaagaa gatgaacaat cactgttgat caggaagaag gtagatagaa 2220 atgtctcttt tcttcgtttg agaaagtcag atgtctctga cgtataactg agcagatgta 2280 ggaggagtaa ctggtgaaga gtcgagttgt ttgagaaaga aaagagagtt gattaagaat 2340 ttgagagaga tctggaaatg aaagagtttg tatatgaacc cagatcttct gggttgttgg 2400 gtatttaaat tgggaaagtg ttcttctact tctgagagaa tctatttgtt atgcggtggc 2460 atttttgtaa taagaatggt tactctagat gaggtgctcc agttgaggct cctcaaactt 2520 gctcatctaa ttggagcatt ggagctcttt atatactaga actttcatta acggatttgc 2580 aacacgtggc ggccatccgc tataatatt 2609 //