ID JN226146; SV 1; linear; genomic RNA; STD; VRL; 6571 BP. XX AC JN226146; XX DT 11-DEC-2011 (Rel. 111, Created) DT 11-DEC-2011 (Rel. 111, Last updated, Version 1) XX DE Cucumber fruit mottle mosaic virus isolate Cm, complete genome. XX KW . XX OS Cucumber fruit mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6571 RA Rhee S.J., Lee G.P.; RT "Construction of infectious full-length cDNA clone of Cucumber fruit mottle RT mosaic virus CM"; RL Unpublished. XX RN [2] RP 1-6571 RA Rhee S.J., Lee G.P.; RT ; RL Submitted (07-JUL-2011) to the INSDC. RL Dept. of Integrative Plant Science, Chung-Ang University, 72-1 Neri RL Daedukmyeon, Ansung, Gyeonggido 456-756, South Korea XX DR MD5; 97024cf8d4302e146492d0e8282b6d34. XX FH Key Location/Qualifiers FH FT source 1..6571 FT /organism="Cucumber fruit mottle mosaic virus" FT /host="Cucumis melo" FT /isolate="Cm" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="06-May-2009" FT /db_xref="taxon:146499" FT CDS 63..5072 FT /codon_start=1 FT /transl_except=(pos:3558..3560,aa:OTHER) FT /product="replicase large component" FT /note="contains readthrough stop codon" FT /db_xref="GOA:G9FYN7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:G9FYN7" FT /protein_id="AEV40683.1" FT /translation="MANITKHINDTREAAAAGRNPLVAQLASKRVYDEAVKSLDSQDKR FT PKVNFARVLTTEQTRKVTESYPEFSISYTASALSVHSLAGGLRYLEGEYLMMQVPYGSP FT VYDIGGNFSQHMLKGRAYVHSCNPCLDLKDIARNEMYKDAIDRYVHKKREAPRSNAWRA FT RAESSNEIKTAGLPSWQIDAFQRYKDCPEAVTCNDVFQECQYEHTRRGDRYAVALHSIY FT DIPFEQIGPALLRKNIKVLFAAFHFSEELLLGQSFGALPNIGAFFTVNGDSVEFQFEEE FT STLHYSHSFQNIRKIVTRTYFPASDRVVYVKEFMVKRVDTFFFRMVRVDTHMLHKSVGT FT YPVCATNYFSLKSSPIFQDKATFSVWFPKAKSKVVIPIFKMQGFFTGSIVAEKMMIDAS FT FIHTVINHICTYDNKALTWRNVQSFVESIRSRVVVNGVSVRSEWDVPVELLTDISFTVF FT LLVKVKKTQIEIMSDKIVTQPQGLIERIVQRVSEAFEGCTEVVQKALLTSGWFRTPADD FT LVLDIPELFMDFHDYLSGVFEADARIEATDVEDVLSASDKLYSTVSELCERYSGIEFDL FT EKFSDFCHHHDVNPALVGTVIEAIFSQTAGITVTGLSTKSVEWAAAEALAPTSVDMDCD FT SDDEELEQKFPNLSNEELRYLHEVRSKEAAFLELQDTFKTKKVTELVSVGVGALPTLPR FT QWIATGKVHLPQVGLSVGKNKHSVEICDEDGVSVKNLHLTETCNLRLKKTITPVIYTGP FT IRVRQMANYLDYLSANLAATIGNLERIVRSNWSGEDEVVQTYGLFDCQANKWILLPSEK FT THSWGVCLTMDDKLRVVLLQYDSAGWPIVDKSFWKAFCVCADTKVFSVIRSLEVLSALP FT LVEPDAKYVLIDGVPGCGKTQEIISSADFKTDLILTPGKEAAAMIRRRANMKYRSPVAT FT NDNVRTFDSFVMNKKPFTFKTLWVDEGLMVHTGLLNFCVNIAKVKEVRIFGDTKQIPFI FT NRVMNFDYPLELRKIIVDTVEKRYTSKRCPRDVTHYLNEVYSSPVCTTSPVVHSVTTKK FT IAGVGLLRPELTALPGKIITFTQNDKQTLLKAGYADVNTVHEVQGETYEETSVVRATAT FT PIGLISRKSPHVLVALSRHTKAMTYYTVTVDPVSCIIADLEKVDQSILSMYASVAGTKX FT QLQQLSVYVHQNLVLPVSKAGFWTDMQNFYDACLPGNSFVLNDYDSVTMRLVDNEINLQ FT PCRLTLSKADPVTESLKMEKKEFLIPLVKTATERPRIPGLLENLIAIVKRNFNTPDLAG FT SLDISSISKGVVDNFFSTFLRDEQLADHLCKVRSLSLESFSAWFDNQSTCALGQLSNFD FT FVDLPPVDVYNHMIKRQPKSKLDTSIQSEYPALQTIVYHSKLVNAVFGPVFRYLTSEFL FT SMVDNSKFFFYTRKTPDDLQSFFSTLSNKQEYEILELDVSKYDKSQNDFHQAVEMLIWE FT RLGLDDILARIWEMGHKKTHISDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMV FT PLSRSFKAAFCGDDSLIYMPPNLEYNDIQSTANLVWNFEAKLYKKKYGYFCGKYVIHHA FT NGCIVYPDPLKLISKLGNKSLESYDHLEEFRISLMDVAKPLFNAAYFHLLDDAIHEYFP FT SVGGSTFAISSLCKYLSNKQLFRSLFIKPSV" FT CDS 5073..5849 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:Q9DKW4" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q9DKW4" FT /protein_id="AEV40682.1" FT /translation="MSISKVGVRNALKPEEFVKITWVDKLLPDAFTILKYLSITDYSVV FT QSKDYEHLIPVDLLRGVDFSKSKYVTLVGVVISGVWTIPENCAGGATVALVDTRMSLVS FT EGTICKFSVSAASRDFTVKLIPNYYVTAADASSKPWSLFVRISGVRIKDGFSPLTLEIA FT SLVATTNSILKKGLRVSVIESVVGSDASVSLDTLSEKVQPFFDSVPITASVVSRDRSYV FT SKGRPPSRSGPVSRKSKSKSEAESFSDSGASEPLSS" FT CDS 5855..6343 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:G9FYN9" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:G9FYN9" FT /protein_id="AEV40684.1" FT /translation="MSYSTSGLRSLPAYTKSFCPYYALYDLLVSAQGGALQTQNGKDIL FT RDSINGLLTTVASPTSRFPAEGFFVWSRESRIAAILDSLLSALDSRNRAIEVENPSNPS FT TSEALNATKRNDDASTAAHNDIPQLISALNDGAGVFDRASFESQFGLVWTAASSSTSK" XX SQ Sequence 6571 BP; 1613 A; 1193 C; 1672 G; 2093 T; 0 other; gataaaagtt ttttacattg aacaaaaaca atatacatta cttttataac aatacacaat 60 acatggcaaa cattacaaaa catatcaatg ataccaggga ggctgcggcc gccgggcgta 120 atccgctcgt ggcgcagctg gcttcgaaga gggtttatga tgaggctgtc aagtctcttg 180 attctcaaga taaacgccct aaggtgaatt ttgctcgggt attgaccaca gagcagacga 240 ggaaggtcac ggagtcgtat ccggagtttt cgatcagtta tactgcgtcg gccttatccg 300 tgcatagctt ggcgggggga ctgcgatatt tagaaggtga gtacctgatg atgcaggttc 360 cctatgggtc gcccgtgtat gatatcggag ggaatttctc gcaacatatg ctgaagggga 420 gagcatacgt gcactcctgc aatccgtgcc tggacctgaa ggacattgca cgcaatgaga 480 tgtacaagga tgccattgac cgttatgtgc ataagaaacg cgaagcgcca cgttctaatg 540 cttggagggc tagggcagag tcgtctaatg aaattaagac ggccggtcta ccttcatggc 600 agatcgatgc gtttcagcga tataaggatt gtccagaggc ggtcacctgt aatgatgtgt 660 tccaagagtg tcagtatgaa catacgagga gaggggatcg ttatgcagtt gctctgcatt 720 cgatttatga tattcctttc gaacagatag gacctgcgct cttgcggaag aatattaagg 780 ttctcttcgc cgcattccat ttctcagagg agttgctgtt ggggcaaagt tttggtgcct 840 tgcctaatat aggtgcgttc tttaccgtca atggtgattc cgttgagttt cagttcgaag 900 aagaatctac tttgcattat tcacatagtt tccagaatat taggaagata gtaactagga 960 cgtattttcc tgcttcagat agggtagttt atgtaaagga gtttatggtt aagcgtgtag 1020 atactttctt tttccgtatg gttagggttg atacccatat gttacataag tcagtaggta 1080 cgtatcctgt ttgtgcgact aactatttct ctctcaagtc gtcaccaata tttcaggata 1140 aagccacgtt ctctgtgtgg tttcccaaag ctaaatctaa ggtggtgata cctatcttta 1200 agatgcaagg gtttttcact gggtctattg tggcagagaa gatgatgatc gatgctagct 1260 ttattcatac tgttatcaat catatctgta cttatgataa taaggcgtta acgtggagga 1320 atgttcagtc cttcgtcgag tcaattcggt cccgggttgt cgtgaatggg gtttcggtgc 1380 ggagtgaatg ggatgtgccg gtagagcttt taactgatat ttcgttcacc gtttttttac 1440 tagtcaaagt taagaagacg cagatcgaga ttatgagtga taaaattgtg acacaacctc 1500 aggggttgat tgagcggatt gtacagagag tctctgaagc tttcgaagga tgtacagaag 1560 tggtgcaaaa ggcccttctt acttccgggt ggttcagaac tccagcggat gatctcgttc 1620 ttgatattcc tgagttgttc atggattttc atgattatct cagcggtgtc ttcgaagcgg 1680 atgctcgtat tgaggcaacg gacgtcgaag atgttttgag tgcttccgac aagctttatt 1740 cgactgtatc ggagctttgt gagcgatatt ctgggattga atttgacttg gagaagtttt 1800 ctgatttttg ccaccaccat gacgtgaatc ctgctttggt gggaaccgtg atagaggcga 1860 ttttttcgca gactgccggg attacagtca ctgggctgtc tacaaaatct gttgagtggg 1920 cagccgcaga ggctttagca ccgacgtctg ttgatatgga ttgtgacagt gatgatgagg 1980 agctggagca gaaattcccg aatctgtcca atgaggagtt gagatatttg catgaggtga 2040 gatcgaagga agccgctttc ttggagctac aagatacatt taaaaccaag aaggtgactg 2100 agttagtgtc tgtgggagta ggagctttgc caacgctacc gcgtcagtgg atagcgacag 2160 ggaaggttca tcttcctcag gttggtctgt cggttgggaa gaataaacat tcggtcgaga 2220 tatgtgacga agatggggtc agtgtgaaga atctgcatct gacggagacg tgtaatctaa 2280 gattgaagaa gactatcact ccggtgatct atactgggcc cataagagtg cgtcagatgg 2340 ctaattatct cgattatctt tctgctaatc tggccgctac gataggaaat ctcgaaagaa 2400 ttgttcgatc gaattggtct ggggaggatg aggttgtgca aacttatggt ctttttgatt 2460 gtcaggctaa taagtggatc ttactgccct ctgagaaaac acatagttgg ggtgtctgtc 2520 tgactatgga tgataagctt cgtgttgtcc tgctgcagta tgattccgcc ggttggccga 2580 ttgtagataa gtctttttgg aaagcttttt gtgtgtgtgc ggatactaaa gttttttctg 2640 ttattaggag tcttgaggtt ttgtctgctt tacctttagt tgaaccggat gctaagtatg 2700 tgctgattga tggtgtgcct ggttgtggga agacgcaaga gattatatcg agtgcggact 2760 tcaaaacgga tctaatcctt acacctggta aggaagccgc ggccatgatc aggcgtagag 2820 ccaacatgaa atataggagt cccgtcgcca caaatgataa tgtgaggact tttgattcat 2880 ttgtaatgaa taaaaagccc tttaccttta agacactatg ggtggatgag ggtctcatgg 2940 tgcataccgg tctgttaaat ttctgtgtga atattgctaa ggtaaaggaa gttcgtattt 3000 tcggtgatac taagcaaatc cccttcatta atagagtgat gaatttcgat tacccactag 3060 agctgaggaa aattattgtt gatacggtgg aaaagcggta cacgagtaaa cggtgtccaa 3120 gggatgtgac tcattatttg aatgaggtat attccagtcc cgtgtgtact actagtcctg 3180 tcgtacattc agttaccaca aaaaagattg ctggagtggg tcttttgcga ccggaattga 3240 cggcattgcc tggtaagatt ataactttca ctcagaatga caagcaaacg cttttaaaag 3300 cgggttatgc tgatgtgaat actgtgcatg aggtgcaggg ggagacatat gaggaaactt 3360 ccgtggtgag ggctactgct acaccaatcg gtttgatttc gcgtaagtct ccgcatgtgc 3420 ttgttgctct gtcgaggcat accaaggcga tgacgtatta tactgtgact gtggatcccg 3480 tgagctgtat aattgctgat ttggagaagg tcgatcaaag tattctgtct atgtatgcct 3540 ctgtggcggg gaccaaatag caattacagc aactatccgt ctatgtgcat caaaatttgg 3600 ttttgcccgt gtcgaaggcg ggtttttgga cggatatgca gaatttttat gacgcttgtc 3660 tgcccgggaa tagttttgtg ttgaatgatt acgattctgt gactatgcgg ctggttgata 3720 atgagatcaa cctgcaacct tgtaggttaa ctctatctaa agccgatcct gttacagagt 3780 ctctgaagat ggagaaaaag gagtttttga tcccgcttgt taaaactgct acggagcgtc 3840 cgcggatccc tgggctttta gagaatttga tagctatagt taagaggaat tttaataccc 3900 cggatttagc cgggagttta gatatttcta gtattagtaa gggtgtagta gataacttct 3960 tttccacttt tttgcgtgac gagcaattgg cggatcacct ttgtaaagtt aggtctctta 4020 gtctagagtc tttttccgca tggtttgata atcagtcaac ttgtgctctg ggtcagttgt 4080 ctaatttcga ttttgtggat ctgcctcccg ttgatgttta taatcatatg attaagaggc 4140 aacccaaatc gaagttagac acctcgattc agtctgagta tcctgcgttg caaacgattg 4200 tttatcatag taaattagtg aatgcggttt ttggtcccgt tttccgttat cttacttccg 4260 agtttttatc tatggtagat aatagtaaat ttttctttta tactaggaaa actccggatg 4320 atttgcaaag tttcttttcc acactttcca ataagcagga gtatgagatt ttagagctag 4380 atgtttccaa atatgataaa tcacagaatg attttcatca ggctgtggag atgcttattt 4440 gggaacgttt aggtctagat gatattcttg ctaggatttg ggaaatgggg cataagaaga 4500 cgcatatcag tgatttccaa gctgggatta aaactcttat ttattatcag cggaaatctg 4560 gagatgttac tacttttata ggtaatactt ttattatagc tgcttgtgtc gcttctatgg 4620 ttccgctgag tcggagtttc aaagctgcct tttgtggtga tgattcactg atttatatgc 4680 caccgaatct ggaatataat gacatacagt cgaccgcgaa tctcgtgtgg aatttcgagg 4740 ctaaactgta taagaagaaa tatggttatt tctgtggcaa atatgtgatc catcatgcga 4800 atgggtgtat tgtttatccg gatccgttga agctaatttc taaattaggc aataagagtc 4860 tggaaagtta cgatcatttg gaggaattta ggatttctct gatggacgta gctaaacctt 4920 tgttcaatgc tgcttatttt catcttttag atgatgctat ccacgagtat tttcctagtg 4980 ttgggggtag cacgtttgct attagttctt tgtgcaagta tcttagtaat aagcagttgt 5040 ttaggtctct attcattaag cctagtgtct agatgtccat tagtaaggtc ggtgtcagga 5100 acgctttaaa gccagaggaa tttgttaaga ttacttgggt tgataagcta cttcctgatg 5160 cttttactat tcttaagtat ttatctatta cagattatag tgttgtacag tctaaagact 5220 atgaacatct catacctgtg gatctactac gtggcgtgga tttttcaaag tctaaatatg 5280 ttactttggt tggtgttgtg atttccgggg tctggacaat tcctgagaat tgtgccggtg 5340 gtgctaccgt ggcgctggtc gatactcgga tgtccttagt gtcggagggt actatttgta 5400 agttttctgt atctgcagcc agtcgggatt ttacggtaaa attgattccg aattattatg 5460 tgactgctgc tgatgcctcc tccaaaccct ggtctttgtt tgttaggatt tctggtgtta 5520 ggatcaaaga tggtttttct ccgttaactc tggagattgc ctctttggtg gctaccacca 5580 attctatttt aaagaagggt ctaagagtta gtgtgatcga gtccgtggta gggtctgatg 5640 cctccgtgtc gttggatacc ttgtctgaaa aggttcaacc cttttttgat tcggttccga 5700 ttacggcttc agtggtatct cgtgataggt cttatgtgtc taaaggtcgc cctccttctc 5760 ggagtggacc tgtgtcgcgt aaatctaaaa gtaagagtga ggcagaatct ttttcggata 5820 gtggcgcttc tgagccacta agttcataat caagatgtct tactctactt ctggtttgcg 5880 ttctttgcct gcatatacta agtctttttg tccttattat gctttgtatg atctgttggt 5940 gtcagcccaa ggtggagccc tgcaaacgca aaatggtaaa gacattttgc gtgactccat 6000 aaatgggttg ttaacgacag ttgcgtctcc tacgagtcgg ttccctgcgg aagggttctt 6060 tgtctggtcc cgtgagtcgc gcattgctgc tatattagat tctctgcttt cggcgttgga 6120 ttcaagaaat agggctattg aagttgaaaa cccttctaat ccttcgacca gtgaagcttt 6180 gaatgctact aagcgcaatg acgacgcgtc tactgctgcg cacaacgaca ttcctcagct 6240 gatttcagct ttgaatgacg gtgccggtgt gtttgataga gcgtcttttg agagtcagtt 6300 cggtctagta tggaccgctg cgtcgtcgtc tacctcgaag tgaggcgtgg tcgctgcgtt 6360 aagcgataga gtttttccct cctctttaat cgaagggttt cccgttatgg gcgtggtcat 6420 cacgaaagat gatagagttt ttccctcctc ttaaatcgaa gggattgttt gcgcggtttc 6480 taccgagcct ctgctgtgtg acagtaagct ggcgtaagca attatgggta gaggtgttcg 6540 aatcaccccc tttgccccgg gtaggggccc a 6571 //