ID   JN209847; SV 1; linear; genomic RNA; STD; VRL; 1059 BP.
XX
AC   JN209847;
XX
DT   02-DEC-2011 (Rel. 111, Created)
DT   01-JUN-2012 (Rel. 113, Last updated, Version 2)
XX
DE   Alfalfa mosaic virus strain WC3 coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Alfalfa mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Alfamovirus.
XX
RN   [1]
RP   1-1059
RA   Emmerling M., Chu P., Smith K., Kalla R., Spangenberg G.;
RT   "Field evaluation of transgenic white clover with AMV immunity and
RT   development of elite transgenic germplasm";
RL   (in) Hopkins A., Wang Z.-Y., Mian R., Sledge M., Barker R.E. (Eds.);
RL   MOLECULAR BREEDING OR FORAGE AND TURF:359-366;
RL   Kluwer Academic Publishers (2004)
XX
RN   [2]
RP   1-1059
RX   DOI; 10.1007/s11248-011-9557-z.
RX   PUBMED; 21947755.
RA   Panter S., Chu P.G., Ludlow E., Garrett R., Kalla R., Jahufer M.Z.,
RA   de Lucas Arbiza A., Rochfort S., Mouradov A., Smith K.F., Spangenberg G.;
RT   "Molecular breeding of transgenic white clover (Trifolium repens L.) with
RT   field resistance to Alfalfa mosaic virus through the expression of its coat
RT   protein gene";
RL   Transgenic Res. 21(3):619-632(2012).
XX
RN   [3]
RP   1-1059
RA   Panter S., Chu P.G., Ludlow E., Garrett R., Kalla R., Jahufer Z.,
RA   de Lucas Arbiza A., Rochfort S., Mouradov A., Smith K.F., Spangenberg G.;
RT   ;
RL   Submitted (05-JUL-2011) to the INSDC.
RL   Plant Functional Genomics Group, Department of Primary Industries Victoria,
RL   Victorian AgriBiosciences Centre, 1 Park Drive, Bundoora, Victoria 3083,
RL   Australia
XX
DR   MD5; a3d2c56aeee018c287ef77071c28ae20.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1059
FT                   /organism="Alfalfa mosaic virus"
FT                   /segment="RNA4"
FT                   /host="Trifolium repens (L.)"
FT                   /strain="WC3"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Burnley, Victoria"
FT                   /isolation_source="leaf"
FT                   /note="subgroup: 1"
FT                   /db_xref="taxon:12321"
FT   gene            215..880
FT                   /gene="cp"
FT   CDS             215..880
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q96616"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q96616"
FT                   /protein_id="AEU08949.1"
FT                   /translation="MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVVKPTN
FT                   TILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLKDFAGPRILEEDLIYRMVFSITPSH
FT                   AGTFCLTDDVTTEDGRAVAHGNPMQEFPQGVFHANEKFGFELVFTAPTHAGMQNQNFKH
FT                   SYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDLDRH"
XX
SQ   Sequence 1059 BP; 269 A; 243 C; 252 G; 295 T; 0 other;
     gcaaagacag tttttattcc cgaaggtcct agtgttccta ataccactat aaatggtata        60
     gcaccaacgg tgcgtataga tgccggttct ccaaagggtc ttggagtccc gaaagggttt       120
     acatatgaaa gttttattaa agatgaaata ttacctgatc attgatcggt aatgggccgt       180
     ttttattttt aattttcttt caaatacttc catcatgagt tcttcacaaa agaaagctgg       240
     tgggaaagct ggtaaaccta ctaaacgttc tcagaactat gctgccttgc gcaaagctca       300
     actgccgaaa cctccggcgt tgaaagtccc ggttgtaaaa ccgacgaata ctatactgcc       360
     acagacgggc tgcgtgtggc aaagcctcgg gacccctctg agtctgagct cttttaatgg       420
     gcttggcgtg agattcctct acagttttct gaaggatttc gcgggacctc ggatcctcga       480
     agaggatctg atttacagga tggtgttttc cataacaccg tcccatgccg gcaccttttg       540
     tctcactgat gacgtgacga ctgaggatgg tagggccgtt gcgcatggta atcccatgca       600
     ggaatttcct caaggcgtgt ttcacgctaa tgagaagttc gggtttgagt tggtcttcac       660
     agctcctacc catgcgggaa tgcaaaatca aaatttcaag cattcctatg ccgtagccct       720
     ctgtctggac ttcgatgcgc agcctgaggg atctaaaaat ccctcatacc gattcaacga       780
     agtttgggtc gagagaaagg cgttcccgcg agcagggccc ctccgcagtt tgattactgt       840
     ggggctgctc gacgaagctg acgatcttga tcgtcattga tgtaccccat taatttggga       900
     tgctaaagtc atttaatgct gacctccact gggtggatta aggtcaaggt atgaagtcct       960
     attcgctcct gataggatcg acttcatatt gcttatatat gtgctaacgc acatatataa      1020
     atgctcatgc aaaactgcat gaatgcccct aagggatgc                             1059
//