ID   JN191619; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   JN191619;
XX
DT   01-JUN-2012 (Rel. 113, Created)
DT   01-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate HN-2 P10 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-1677
RX   DOI; 10.1007/s00705-012-1282-2.
RX   PUBMED; 22447103.
RA   Li Y., Jia M., Jiang Z., Zhou T., Fan Z.;
RT   "Molecular variation and recombination in RNA segment 10 of rice
RT   black-streaked dwarf virus isolated from China during 2007-2010";
RL   Arch. Virol. 157(7):1351-1356(2012).
XX
RN   [2]
RP   1-1677
RA   Li Y., Jiang Z., Jia M., Zhou T., Fan Z.;
RT   ;
RL   Submitted (29-JUN-2011) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   2 Yuanmingyuan West Road, Beijing, Beijing 100093, China
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DR   MD5; 7027194f7230ce104147e72c83b20b4f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="maize"
FT                   /isolate="HN-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Henan"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="P10"
FT                   /note="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:I3V6D9"
FT                   /protein_id="AFK73741.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLTHFNNLFHE
FT                   LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVATFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFEHLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQIKSKVKADDPDEYELTSLSTLRTNDDGTSASSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 551 A; 297 C; 293 G; 536 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt aaacaaccga ccaacaatca ctctgctaac tcatttcaac       120
     aatctatttc acgaactaaa cattgtcaaa tcgccccacg ttgcatcttc ccaaactact       180
     gttaatttgt acattcgtaa gcatttgttg acccgacttc atgatagact acaaactgta       240
     gaaactagca ctttgcccaa cattacacaa cttaaagacc atattcgtag cttttttcaa       300
     aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagtga agaatttgta       360
     ggtgtggcta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtac aaattgagac cctaactgaa ggaaacatta ctttgaaacc cttttctgct       480
     gatggtttag aagtcattct cgatgatagt tatattggta tagttggtaa aattccaggt       540
     ttagaagttc ataaattgct agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gattttaatt gtcctgcaag cactactgat gttacacatt atggtggtta tgaccaattt       720
     tcacgtcaaa tgttcgaaca tttgaatcta ttttataaca ttagccttag cataattccc       780
     gtttcagctt tgaaaacagt tcatttattt gaaaaagaac taagtgtttt agatgcggat       840
     aaatctttac tcgaacaaac ttggagcgcg gtagcgtcat ttgttgaaac ttggcagatt       900
     aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt gtccactttg       960
     cgcactaatg acgatggcac ctctgcttct agtcctttta cagataagaa attcattgat      1020
     tggtacatta agactttttc taagactgag aaaggatcgt cgttgcgtcg aaacgaatta      1080
     gaagagaaaa gtgccactag tacttcaact acagtaaaga aggttaaaat tcatttttcc      1140
     gttcaatatt ttgatgaatt taaagttaat ggacatgaaa aaagcgttgt agttcaaact      1200
     cataaaggcg aaatgacgtt agattattat cgtaaaattg gcgaagtgtt aagtgctatt      1260
     tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt acattaagct tggcgttgag      1320
     aaagcatttc atttagcacc tgtaattctg aagaagtata atttgactat tgatgacatt      1380
     atcaacttta ttgataaagg accttcttat ttagctaaat tagacaagat tgatgattgg      1440
     tctttaattt caaagcttat cattaccagc gttttaccta atatcattca agctgtttac      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatca tcagtagagc gaacaattta      1560
     ttgaaatctg atagggatag gctattaaag aaggcacttt ccgccaacgt ttcttcttcc      1620
     aacacatcta gtcatgaaca tgtacagaag atagtattaa acaaagtgac aagatga         1677
//